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101 results for “morphological phenotype”
◂Fig. 3 Historically described phenotypical variations and yet undiscovered deviations in the plate pattern of P. volzii. b–c, f, i, l–m Light microscopy, a, d–e, g–h, k scanning electron microscopy. a–f Newly identified deviations a–b plate 4′′ pentagonal in strains a GeoM*793; b GeoM*788; c plate 2a split (strain GeoK*024); d plates 2′′ and 3′′ fused (strain GeoM*866); e plates 1′′′ and 1′′′′ fused (strain GeoM*788); f plates 1a and 3′ fused (strain GeoM*788). g–m Historic infraspecific taxa; g P. guestrowiense forma lineatum (strain GeoM*866); h P. guestrowiense forma compressum (strain GeoM*866); i P. guestrowiense subvar. originale (strain GeoK*024); k P. volzii var. cinctiforme (strain GeoM*793); l P. volzii var. simplex (strain GeoM*789); m P. volzii forma complexum (strain GeoM*793). Abbreviations: n′: apical plate, n′′: precingular plate, n′′′: postcingular plate, n′′′′: antapical plate, na: anterior intercalary plate, nC: cingular plate, split or fused plates are indicated by asterisks. Scale bar= 10 µm. U A= 15 kV in Morphological and molecular variability of Peridinium volzii Lemmerm. (Peridiniaceae, Dinophyceae) and its relevance for infraspecific taxonomy
◂Fig. 3 Historically described phenotypical variations and yet undiscovered deviations in the plate pattern of P. volzii. b–c, f, i, l–m Light microscopy, a, d–e, g–h, k scanning electron microscopy. a–f Newly identified deviations a–b plate 4′′ pentagonal in strains a GeoM*793; b GeoM*788; c plate 2a split (strain GeoK*024); d plates 2′′ and 3′′ fused (strain GeoM*866); e plates 1′′′ and 1′′′′ fused (strain GeoM*788); f plates 1a and 3′ fused (strain GeoM*788). g–m Historic infraspecific taxa; g P. guestrowiense forma lineatum (strain GeoM*866); h P. guestrowiense forma compressum (strain GeoM*866); i P. guestrowiense subvar. originale (strain GeoK*024); k P. volzii var. cinctiforme (strain GeoM*793); l P. volzii var. simplex (strain GeoM*789); m P. volzii forma complexum (strain GeoM*793). Abbreviations: n′: apical plate, n′′: precingular plate, n′′′: postcingular plate, n′′′′: antapical plate, na: anterior intercalary plate, nC: cingular plate, split or fused plates are indicated by asterisks. Scale bar= 10 µm. U A= 15 kV
Data from: Convergent evolution of phenotypic integration and its alignment with morphological diversification in Carribean Anolis ecomorphs
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Data from: Phenotypic covariation and morphological diversification in the ruminant skull
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Phylogeographic analysis of character displacement in feeding phenotypes of snail-feeding Acoptolabrus ground beetles: Morphological measurements
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Data from: Toward synthesizing our knowledge of morphology: using ontologies and machine reasoning to extract presence/absence evolutionary phenotypes across studies
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Rapid gain and loss of a chromosome drives key morphology and virulence phenotypes in Histoplasma, a fungal pathogen of humans
GEO Series GSE296938. Histoplasma ohiense. 57 samples. Type: Expression profiling by high throughput sequencing.
An allelic series of spontaneous Rorb mutant mice exhibit a gait phenotype, changes in retina morphology and behavior, and gene expression signatures associated with the unfolded protein response
GEO Series GSE229218. Mus musculus. 66 samples. Type: Expression profiling by high throughput sequencing.
Verteporfin treatment controls morphology, phenotype, and global gene expression for cells of the human nucleus pulposus
GEO Series GSE151090. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Combining phenotypic profiling and targeted RNA-Seq reveals linkages between transcriptional perturbations and chemical effects on cell morphology: Retinoic acid as an example
GEO Series GSE200845. Homo sapiens. 372 samples. Type: Expression profiling by high throughput sequencing; Other.
Integrated Molecular-Phenotypic Profiling Reveals Metabolic Control of Morphological Variation in Stembryos
GEO Series GSE250136. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Combining phenotypic profiling and targeted RNA-Seq reveals linkages between transcriptional perturbations and chemical effects on cell morphology: Retinoic acid as an example
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Linking transcriptomes with morphological and functional phenotypes in mammalian retinal ganglion cells
GEO Series GSE211038. Mus musculus. 472 samples. Type: Expression profiling by high throughput sequencing.
Astrocyte morphology driven improvements to OCD phenotypes
GEO Series GSE247241. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
FIG. 5 in Phenotypic Variation in Brook Trout Salvelinus fontinalis (Mitchill) at Broad Spatial Scales Makes Morphology an Insufficient Basis for Taxonomic Reclassification of the Species
FIG. 5. Representative examples of diverse morphology, particularly in mouth shape and position, observed within a single stream-dwelling Brook Trout population. Fish on the first row display more inferior mouth positions, whereas fish on the last row show more isognathous and prognathic jaws with a terminal/superior mouth position. All fish were captured from Crabtree Creek in the Savage River Watershed of western Maryland (39827047.2500 N, 79812036.0800W). Fish total length is noted in the upper right corner of each photograph. A full description of collection and photography protocols is provided in Kazyak et al. (2015).
FIG. 3 in Phenotypic Variation in Brook Trout Salvelinus fontinalis (Mitchill) at Broad Spatial Scales Makes Morphology an Insufficient Basis for Taxonomic Reclassification of the Species
FIG. 3. Comparison of pored lateral-line scale counts for specimens collected from (A) 38 streams in the Great Smoky Mountains National Park (GSMNP) by Weathers et al. (2019) and (B) three streams surveyed by Stauffer (2020) and three populations described by Stauffer and King (2014) in Long Island, NY. Individual-level data collected by Weathers et al. (2019) are displayed with violin plots, with the width of the violin plot for each stream demonstrating the density of the distribution for a given value and the minimum and maximum values indicated by the tails of the distribution. Due to discrepancies between published and raw data, values from Stauffer (2020) and Stauffer and King (2014) are shown using two methods. Data from the publication appear as the mode(s) (circle) and range (lines), and the raw, individual-level data appear as violin plots. Streams appear on the x-axis by ascending average trait value, and streams included in both Weathers et al. (2019) and Stauffer (2020) are plotted with the same color (Cosby Creek [CS]: yellow; Greenbrier Creek [GB]: green; Indian Camp Creek [ICC]: blue). Data from populations in NY are shown in red and all other sites from GSMNP, TN in gray.
Figure 9 in High level of phenotypic homoplasy amongst eutardigrades (Tardigrada) based on morphological and total evidence phylogenetic analyses
Figure 9. Majority rule phylogram that best fitted current Eutardigrada classification (Marley et al., 2011), obtained with PAUP for parsimonious analyses using the reduced morphological matrix, that is, without any homoplastic characters. Values above branches are parsimonious bootstrap supports after 1000 replicates. Values under branches are Bremer relative supports. Superfamilies with associated claw morphologies and families are indicated.
Figure 6 in High level of phenotypic homoplasy amongst eutardigrades (Tardigrada) based on morphological and total evidence phylogenetic analyses
Figure 6. Maximum clade credibility phylogram obtained with Bayesian inference using the complete morphological matrix without gamete-related characters. Values above branches are posterior probabilities supports. Scale bar indicates nucleotide substitutions per site.
User-Friendly Microfluidic System Reveals Native-Like Morphological and Transcriptomic Phenotypes Induced by Shear Stress in Proximal Tubule Epithelium
GEO Series GSE221871. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Label-free melanoma phenotype classification using AI-based morphological profiling
GEO Series GSE273247. Homo sapiens. 41 samples. Type: Expression profiling by high throughput sequencing.
Morphological profiling of chondrogencially-induced multipotent stromal cell aggregates reveals emergent morphological phenotypes predictive of functional capacity
GEO Series GSE110755. Homo sapiens. 16 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.