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Figure 4 in Under pressure: maternal effects promote drought tolerance in progeny seed of Palmer amaranth (Amoronthus polmeri)
Figure 4. The effect of maternal water conditions (continuous water-deficit vs. well-watered) on cumulative germination of progeny seeds in two Amoronthus polmeri populations (California and Kansas) tested under various water potentials at 30 C. Lines are fitted values obtained from the hydrotime model, Equation 3, ̜ ̹ ̜ ̜ ̹ ̹ g w,t¼ Φ w ― θH,w,σ, with parameter estimates shown in Table 1. g tg bð50Þ wb
Figure 3 in Under pressure: maternal effects promote drought tolerance in progeny seed of Palmer amaranth (Amoronthus polmeri)
Figure 3. The effect of maternal water conditions (continuous water-deficit vs. well-watered) on cumulative germination of progeny seeds in two Amoronthus polmeri populations (̜ California̜ ̹ and Kansas̹) tested under various water potentials at 20 C. Lines are fitted values obtained from the hydrotime model, Equation ̜ ̹ θ 3, g w,t¼ Φ w ― H, w, σb, with parameter estimates shown in Table 1. g tg bð50Þ w
Figure 2 in Under pressure: maternal effects promote drought tolerance in progeny seed of Palmer amaranth (Amoronthus polmeri)
Figure 2. Differences in 1,000-seed weight, seed surface area, and total germination (dormancy) of progeny seeds from two Amoronthus polmeri populations (California and Kansas) grown under continuous water-deficit (WD) or well-watered (WW) irrigation conditions. Vertical bars on data points indicate SE.
Fig. 4 in High temperatures and low humidity promote the occurrence of microsporidians (Microsporidia) in mosquitoes (Culicidae)
Fig. 4 Occurrence of microsporidian species found in total (All), male and female mosquitoes collected during the cold and warm months. Comparative statistics are presented in Additional file 1: Tables S12 and S13
Fig. 3 in High temperatures and low humidity promote the occurrence of microsporidians (Microsporidia) in mosquitoes (Culicidae)
Fig. 3 Raincloud plots (i.e. combined violin plots, box plots and dot plots) for the contribution of infected mosquitoes relative to cold or warm months: a for the mosquito pool without dividing into females and males and b separately for females and males, collected in cold (blue) and warm (red) months. The dot plots show the proportion of infected mosquitoes (jittered horizontally). Each dot is the individual proportion of a particular species with a particular sex in a single month. The box plots show the extremes (whisker tails), interquartile range (box boundaries) and median (horizontal line). The violin plots show the probability density of the data. Symbols (asterisks or 'ns') indicate Bonferroni p-value (B) and Holm p-value (H) (B/H). Double asterisks (**) indicate statistical significance at p <0.01; ns, no statistical significance
Fig. 2 in High temperatures and low humidity promote the occurrence of microsporidians (Microsporidia) in mosquitoes (Culicidae)
Fig. 2 Correlation plots between microsporidian DNA-positive mosquitoes and a temperature (°C), b humidity (%), c wind (m/s) and d rainfall (mm). The R value indicates the Pearson's correlation coefficient statistic, the p value is statistically significant, the shadowed area shows the 95% confidence interval, and the black line is the regression line. The month and year of the data points are indicated according to the legend at the bottom
Fig. 1 in Skin extract from Rhamdia quelen (Siluriformes: Heptapteridae) does not promote stress in conspecifics
Fig. 1. Schematic drawing of the tank used for behavioral analysis of R. quelen, indicating the axes of evaluation of locomotory activity (arrows, "x" and "y") and the location of the aeration stone and placement of alarm substance (*).
MERLIN H2020 Project: Promotional Video
<p>MERLIN: Helping today's researchers create tomorrow's enterprises</p> <p>Many breakthrough discoveries fruit of research programmes often fail to realize their potential as an innovation, that is, bringing to market an idea or process.</p> <p>MERLIN will support market-oriented researchers, SMEs and startups across Europe, to consider the full potential of their research and to shape ideas and outputs into innovations to be ready for market validation and commercialisation, by using modern needs-first, market-led methodologies and offering free training workshops and meetup in 7 European countries.</p> <p>Check our website to stay updated <a href="https://www.youtube.com/redirect?event=video_description&v=lqeYWrm4swM&redir_token=Pi1gRtpcbFbP_6TasJfwceKrEYp8MTUyNjQ4NjI2MEAxNTI2Mzk5ODYw&q=https%3A%2F%2Fmerlin-ict.eu">https://merlin-ict.eu</a> We are ready for you at MERLIN.</p> <p>MERLIN has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 780460</p>
MADFORWATER: WP3: Adaptation of technologies for efficient water management and treated wastewater reuse in agriculture: Task3.1: Reduction of crop water requirement and tools for irrigation management with treated WW: Subtask 3.1.1: Plant Growth Promotion (PGP) bacteria to enhance crop resistance to water stress and salinity: Subset1
<p>This dataset contains the data underlying the following publication: Mouna Mahjoubi, Simone Cappello, Yasmine Souissi, Atef Jaouani and Ameur Cherif (February 7th 2018). Microbial Bioremediation of Petroleum Hydrocarbon– Contaminated Marine Environments, Recent Insights in Petroleum Science and Engineering Mansoor Zoveidavianpoor, IntechOpen, DOI: 10.5772/intechopen.72207</p> <p> </p>
Sugarcane Culturable microbiome prospection for plant growth promotion traits in Cynodon dactylon
<p>Data set of running experiments for the prospection of traits for plant growth promotion of bacterial communities from sugarcane tissues: rhizospheric soil, roots, stalks, and leaves. For this experiment, we are using a model plant: Cynodon dactylon known as Bermuda grass.</p>
Link to dataset related to article "Sustained activation of detoxification pathways promotes liver carcinogenesis in response to chronic bile acid-mediated damage"
<p>This record contains link to raw data related to article "Sustained activation of detoxification pathways promotes liver carcinogenesis in response to chronic bile acid-mediated damage"</p> <p>Chronic inflammation promotes oncogenic transformation and tumor progression. Many inflammatory agents also generate a toxic microenvironment, implying that adaptive mechanisms must be deployed for cells to survive and undergo transformation in such unfavorable contexts. A paradigmatic case is represented by cancers occurring in pediatric patients with genetic defects of hepatocyte phosphatidylcholine transporters and in the corresponding mouse model (Mdr2-/- mice), in which impaired bile salt emulsification leads to chronic hepatocyte damage and inflammation, eventually resulting in oncogenic transformation. By combining genomics and metabolomics, we found that the transition from inflammation to cancer in Mdr2-/- mice was linked to the sustained transcriptional activation of metabolic detoxification systems and transporters by the Constitutive Androstane Receptor (CAR), a hepatocyte-specific nuclear receptor. Activation of CAR-dependent gene expression programs coincided with reduced content of toxic bile acids in cancer nodules relative to inflamed livers. Treatment of Mdr2-/- mice with a CAR inhibitor blocked cancer progression and caused a partial regression of existing tumors. These results indicate that the acquisition of resistance to endo- or xeno-biotic toxicity is critical for cancers that develop in toxic microenvironments.</p> <p>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE80777 under the accession GSE80777, which comprises ChIP-seq data (GSE80775) and expression data (GSE80776).</p>
A parametric life cycle framework to promote sustainable-by-design product development: Application to a hydrogen production technology
<p>The European Ecodesign Directive is an effective normative framework that has been extensively proven to support the energy transition of numerous European industrial sectors. From an analytical standpoint, it provides practitioners with the EcoReport tool, a simplified life cycle spreadsheet that is aimed at guiding the development of ecodesign measures of mandatory compliance in European countries. In this regard, several studies have highlighted the limitations of the EcoReport tool when addressing emerging technologies like those tied to the hydrogen sector. These works also propose to further integrate material criticality and social metrics in order to enlarge the scope of the European Directive and foster the shift from ecodesign to sustainable-by-design product development. In this situation, building upon the principles of the EcoReport tool and recognizing the outcomes of the aforementioned critical analyses, the conceptualization of a novel sustainable-by-design framework is presented and applied to a Solid Oxide Electrolysis Cell (SOEC) stack for hydrogen production. The operationalization of the framework is conducted, for the first time in the context of sustainable design, by combining the use of the <em>Brightway2</em> and <em>lca_algebraic</em> Python packages. Overall, the proposed approach succeeds in providing a complete sustainability perspective to the design of emerging technologies. Regarding the tangible lessons learned on the hydrogen-related case study, product concepts are proven to progressively improve the sustainability performance of the technology. It is noticeable that the enhancement of the economic competitivity is more limited than that achieved at the remaining sustainability indicators (i.e., environmental, social and material criticality metrics). In line with the outcomes of the life cycle contribution assessment, multi-criteria decision analysis ratings lead to concluding that a sustainable-by-design SOEC stack product concept should prioritize limiting its material intensity.</p>
Research Data for the Journal Article: Insertion of CO2 to 2-methyl furoate promoted by a cobalt hypercrosslinked polymer catalyst to obtain a monomer of CO2-based biopolyesters
Open the record for dataset details and reuse information.
THE ROLE OF PROPERTY MANAGEMENT IN PROMOTING ENERGY-EFFICIENT SOLUTIONS FOR RENTALS
<p>Real estate management plays a key role in promoting energy efficient solutions when renting out properties. The purpose of the study is to analyze the impact of management companies on the introduction of energy-efficient technologies to increase the competitiveness of facilities and reduce operating costs. The methodology is based on the analysis of data on the application of modern energy-efficient solutions, including lighting, heating and automation systems in buildings in the Czech Republic. The results showed that the use of such technologies helps to reduce utility costs by 20-40% and increases the attractiveness of facilities for tenants. In conclusion, property management aimed at energy efficiency ensures the achievement of sustainable development and economic benefits for owners and tenants. These measures increase the market value of the properties and extend the lease terms, which strengthens the position in the real estate rental market.</p>
BEE-STEWARD: a research and decision support software for effective land management to promote bumblebee populations
<p><span><span>The demand for agent-based models to explore the effects of environmental change on pollinator population dynamics is growing. However, models need a simple yet flexible interface to enable adoption by a wide range of stakeholders. </span></span><span><span>We introduce BEE-STEWARD: a research and decision-support software tool, enabling researchers, policy-makers, land management advisors, and practitioners to predict and compare the effects of bee-friendly management interventions on bumblebee populations over several years. </span></span><span><span>BEE-STEWARD integrates the BEESCOUT and <i>Bumble</i>-BEEHAVE agent-based models of bumblebee behaviour, colony growth and landscape exploration into a user-friendly interface, with reconstructed code, and expanded functionality. Bespoke automatic reports can be created to illustrate how different land management interventions can affect the densities of bumblebees and their colonies over time. </span></span><span><span>BEE-STEWARD could be an important virtual test-bed for scientists exploring the impacts of different stressors on bumblebees and used by those with little or no modelling experience, enabling a shared methodology between research, policy, and practice.</span></span></p>
DNA structural properties of archaeal promoters
<p>Supplementary information used in a study regarding the characterization of promoter sequences of archaea.</p>
The evolution of size-dependent competitive interactions promotes species coexistence
<p>1. Theory indicates that competing species coexist in a community when intraspecific competition is stronger than interspecific competition. When body size determines the outcome of competitive interactions between individuals, coexistence depends also on how resource use and the ability to compete for these resources change with body size. Testing coexistence theory in size-structured communities, therefore, requires disentangling the effects of size-dependent competitive abilities and niche shifts.</p> <p>2. Here, we tested the hypothesis that the evolution of species and size-dependent competitive asymmetries increased the likelihood of coexistence between interacting species.</p> <p>3. We experimentally estimated the effects of size-dependent competitive interactions on somatic growth rates of two interacting fish species, Trinidadian guppies (Poecilia reticulata) and killifish (Rivulus hartii). We controlled for the effects of size-dependent changes in the niche at two competitive settings representing the early (allopatric) and late (sympatric) evolutionary stages of a killifish-guppy community. We fitted the growth data to a model that incorporates species and size-dependent competitive asymmetries to test whether changes in the competitive interactions across sizes increased the likelihood of species coexistence from allopatry to sympatry.</p> <p>4. We found that guppies are competitively superior to killifish but were less so in sympatric populations. The decrease in the effects of interspecific competition on the fitness of killifish and increase in the interspecific effect on guppies' fitness increased the likelihood that sympatric guppies and killifish will coexist. However, while the competitive asymmetries between the species changed consistently between allopatry and sympatry between drainages, the magnitude of the size-dependent competitive asymmetries varied between drainages.</p> <p>5. These results demonstrate the importance of integrating evolution and trait-based interactions into the research on how species coexist.</p>
Figure 3 in Aedeagus evolution promotes speciation? A primary pattern in rove beetle phylogeny
Figure 3. Plotting Paramere-to-Median-lobe Index (PM Index) and the number of species of the selected genera (Y axis) with the divergence time (X axis) estimated. PM Index variations along with divergence time (a, c); species number variations along with evolutionary time (b, d). The abbreviation of geological ages are as follows: Jur—Jurassic; Cre—Cretaceous; Pal—Paleocene; Eoc— Eocene; Oli—Oligocene; Mio—Miocene; Pli—Pliocene.
Figure 2. Figure 2 in Aedeagus evolution promotes speciation? A primary pattern in rove beetle phylogeny
Figure 2. Figure 2. Phylogeny of the subfamily Staphylininae with divergence time estimates based on the concatenated sequence. Blue bars at each node show 95% highest posterior density interval for the main nodes. Colored branches and circled capital letters are as in Figure 1. Circled numbers refer to three main sub-clades within Clade A discussed in text. Circled roman letters represent the calibration points. Capital letter 'A', 'P' and 'N' represent aedeagus, paramere and species number of each corresponding genus respectively. Colored arrows refer to phylogenetic patterns of aedeagus morphology discussed in text. Dot lines with lower case letters refer to divergence times discussed in text. The abbreviation of geological ages are as follows: Jur—Jurassic; Cre—Cretaceous; Pal— Paleocene; Eoc—Eocene; Oli—Oligocene; Mio—Miocene; Pli—Pliocene.
Figure 1 in Aedeagus evolution promotes speciation? A primary pattern in rove beetle phylogeny
Figure 1. Bayesian phylogenetic tree for the partitioned combined analysis of four genes. Only posterior probabilities above 0.60 are shown. Colored branches represent the mainly monophyletic groups resolved in the phylogenetic inference. Verticle bars: thick bars denote the tribes of Staphylinini, thin bars the subtribes, grey bar the outgroup. The capital letters "A" and "B" refer to two main clades discussed in the text.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.