Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,401
datasets available to search
ShareScore release 0.9.0
Dataset results
1,401 results for “single-cell Seq”
C1 single-cell RNA-seq of Adult Human spermatoognia
GEO Series GSE108977. Homo sapiens. 635 samples. Type: Expression profiling by high throughput sequencing.
Single-cell epigenetic, transcriptional, and protein states of HIV-1-infected cells [scRNA-seq]
GEO Series GSE239909. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects (MARS-Seq)
GEO Series GSE133542. Canis lupus familiaris; Homo sapiens; Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq [Mm]
GEO Series GSE199344. Mus musculus. 40 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
CTLA-4 tail fusion enhances CAR-T anti-tumor immunity [single-cell RNA-seq]
GEO Series GSE234347. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq uncovers the pathological alterations of pancreatic islets in type 2 diabetes mice
GEO Series GSE200531. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Construction of a cross-species chromatin accessibility landscape at a single-cell level using CH-ATAC-seq
GEO Series GSE232162. Drosophila melanogaster; Eisenia andrei; Danio rerio. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptomics and single-cell RNA sequencing analysis of long-term cultured human islets in vitro [scRNA-Seq]
GEO Series GSE280984. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis unveils a prevalent epithelial/mesenchymal hybrid state during mouse organogenesis
GEO Series GSE87038. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative CD117+ CD34+ cells)
GEO Series GSE70243. Mus musculus. 66 samples. Type: Expression profiling by high throughput sequencing.
Single-cell chromatin accessibility identifies pancreatic islet cell type- and state-specific regulatory programs of diabetes risk [RNA-seq]
GEO Series GSE160473. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of the mouse lymph node lymphatic vasculature: SMART-seq2
GEO Series GSE143877. Mus musculus. 384 samples. Type: Expression profiling by high throughput sequencing.
single-cell RNA-seq dataset of P1 and P7 mice hearts.
GEO Series GSE305621. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive analysis of metastatic gastric cancer tumor cells using Single-cell RNA-seq
GEO Series GSE158631. Homo sapiens. 94 samples. Type: Expression profiling by high throughput sequencing.
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility (Mouse single cell RNA-Seq mESCs)
GEO Series GSE148268. Mus musculus. 192 samples. Type: Expression profiling by high throughput sequencing.
High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq
GEO Series GSE199346. Homo sapiens; Mus musculus. 87 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
MIC-Drop-seq: Scalable single-cell phenotyping of mutant vertebrate embryos
GEO Series GSE315445. Danio rerio. 36 samples. Type: Expression profiling by high throughput sequencing; Other.
Reprogram-Seq: A platform for single-cell combinatorial reprogramming [III]
GEO Series GSE117786. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
An optimized protocol for retina single-cell RNA sequencing [scRNA-Seq]
GEO Series GSE153673. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state [RNA-seq-invitro]
GEO Series GSE236735. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.