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137
datasets available to search
ShareScore release 0.9.0
Dataset results
137 results for “transcription start sites”
The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites (ChIP-seq MEFs)
GEO Series GSE53939. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Analysis of transcription start sites from nascent RNA identifies a unified architecture of initiation at mammalian promoters and enhancers (PRO-seq)
GEO Series GSE60455. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Histone H3K4ac, as a marker of active transcription start sites and enhancers, plays roles in histone eviction and RNA transcription
GEO Series GSE248434. Homo sapiens. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Development of GRO-cap (GRO-seq followed by 5'-cap enrichment) to map transcription start sites in C. elegans
GEO Series GSE43085. Caenorhabditis elegans. 8 samples. Type: Expression profiling by high throughput sequencing.
DNA supercoiling impacts alternative transcription start site selection in yeast
GEO Series GSE292782. Saccharomyces cerevisiae. 12 samples. Type: Other.
Piwi regulates the usage of alternative transcription start sites in the Drosophila ovary
GEO Series GSE255438. Drosophila melanogaster. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Translation and transcription start site profiling of HSV-1 infected cells
GEO Series GSE128324. Human alphaherpesvirus 1 strain 17; Homo sapiens. 28 samples. Type: Other.
The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites
GEO Series GSE28332. Mus musculus; Homo sapiens. 30 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
DNA methylation controls unmethylated transcription start sites in the genome in trans
GEO Series GSE85376. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide transcription start site mapping of Bradyrhizobium japonicum free-living cells and bacteroids - a rich resource to identify new transcripts, proteins and to study gene regulation
GEO Series GSE69059. Bradyrhizobium diazoefficiens USDA 110. 4 samples. Type: Expression profiling by high throughput sequencing.
Analysis of transcription start sites from nascent RNA identifies a unified architecture of initiation at mammalian promoters and enhancers (GRO-cap)
GEO Series GSE60453. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Mapping and quantifying nascent transcript start sites using TT-TSS-seq
GEO Series GSE292786. Saccharomyces cerevisiae; Mus musculus. 27 samples. Type: Other.
BORIS/CTCFL epigenetically reprograms clustered CTCF binding sites into alternative transcriptional start sites.
GEO Series GSE207058. Mus musculus; Homo sapiens. 140 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Ribosome rescue factor PELOTA modulates translation start site choice and protein isoform levels of transcription factor C/EBPα
GEO Series GSE226437. Homo sapiens. 40 samples. Type: Other; Expression profiling by high throughput sequencing.
CMTR1 is recruited to transcription start sites and has enhanced influence over ribosomal protein and histone genes [RNA-seq]
GEO Series GSE175629. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
N6-Methyldeoxyadenosine Marks Active Transcription Start Sites in Chlamydomonas
GEO Series GSE62690. Chlamydomonas reinhardtii. 14 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
Differential RNA-seq (dRNA-seq) for annotation of transcriptional start sites and small RNAs in Helicobacter pylori
GEO Series GSE67564. Helicobacter pylori 26695. 6 samples. Type: Expression profiling by high throughput sequencing.
Identification of the transcription start site of transcribed sequences from the mouse Sry locus by CAGE-seq
GEO Series GSE151473. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcription elongator SPT6L regulates the occupancies of the SWI2/SNF2 chromatin remodelers SYD/BRM and nucleosomes at transcription start sites in Arabidopsis
GEO Series GSE207391. Arabidopsis thaliana. 40 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Piwi regulates the usage of alternative transcription start sites in the Drosophila ovary
GEO Series GSE255481. Drosophila melanogaster. 72 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.