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1,298
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ShareScore release 0.9.0
Dataset results
1,298 results for “Archive”
Expanding epigenomics to archived FFPE tissues: An evaluation of DNA repair methodologies
GEO Series GSE59038. Homo sapiens. 24 samples. Type: Methylation profiling by genome tiling array.
Expression profiling of archival tissues for long-term health studies
GEO Series GSE32651. Homo sapiens. 1003 samples. Type: Expression profiling by array.
Single Nucleus DNA Sequencing of Flow Sorted Archived Frozen and Formalin Fixed Paraffin Embedded Solid Tumors
GEO Series GSE268921. Homo sapiens. 8 samples. Type: Genome variation profiling by array.
Gene expression profiling of archival tongue carcinoma and normal tongue tissue (subset)
GEO Series GSE34106. Homo sapiens. 43 samples. Type: Expression profiling by array.
Spatially exploring RNA biology in archival formalin-fixed paraffin-embedded tissues
GEO Series GSE274641. Homo sapiens; Mus musculus. 11 samples. Type: Other.
Dose-Response Analysis of RNA-Seq Profiles in Archival Formalin-Fixed Paraffin-Embedded (FFPE) Samples
GEO Series GSE78962. Mus musculus. 80 samples. Type: Expression profiling by high throughput sequencing.
snPATHO-seq: unlocking the FFPE archives for single nucleus RNA profiling [Visium]
GEO Series GSE268427. Homo sapiens. 3 samples. Type: Other.
A specific gene expression program underlies antigen archiving by lymphatic endothelial cells in mammalian lymph nodes [scRNA-seq]
GEO Series GSE281268. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing; Other.
mRNA-seq Whole Transcriptome Profiling of Fresh Frozen versus Archived Fixed Tissues
GEO Series GSE113976. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing.
DAMP-S-AG: Digital Archive of Mobile Performances - Smule - Amazing Grace
<p>The DAMP-S-AG contains 17582 solo singing performances from different singers on one and the same backing track - Amazing Grace. This is a real-world dataset from performances on the Smule karaoke app, containing mobile-device recordings of singers varying in age, gender, geographic location. This allows to cross-compare vocal performances on the same backing track. It is suitable for both solo and multi-instrumental singing voice analysis.</p> <p>Users of this dataset must read and accept Smule's Research Data License Agreement (LICENSE.txt).</p>
Data archive for the journal article "Black Carbon Aerosols in the Lower Free Troposphere are Heavily Coated in Summer but Largely Uncoated in Winter at Jungfraujoch in the Swiss Alps"
<p>Data archive for figures accompanying the journal article "Black carbon aerosols in the lower free troposphere are heavily coated in summer but largely uncoated in winter at Jungfraujoch in the Swiss Alps". In 2020 this article was accepted for publication in the journal <em>Geophysical Research Letters</em>. Data are uploaded in the form of Igor Pro experiment files (.pxp).</p>
Image archive for the paper: The Middle Pleistocene small mammals from the lower layers of Tunel Wielki Cave (Kraków-Częstochowa Upland, Poland). An Early Toringian assemblage in Poland.
<p>Image archive of the measured specimens of the small mammal assemblage from Tunel Wielki cave. </p>
Biological sequences named and claimed in US patents and patent applications, CAMBIA Patent Lens Archived 2013-07-27
<p>Archived PatentLens sequence data released under Attribution-NonCommercial-ShareAlike 2.5 Generic (CC BY-NC-SA 2.5)</p> <p>http://web.archive.org/web/20130410080554/http://www.patentlens.net/<br> http://web.archive.org/web/20130414210513/http://www.patentlens.net/sequence/<br> http://web.archive.org/web/20130727112746/http://www.patentlens.net/sequence/sw/<br> http://web.archive.org/web/20130727125050/http://www.patentlens.net/sequence/US_A/<br> http://web.archive.org/web/20130412104754/http://www.patentlens.net/sequence/US_B/</p>
Supporting Information and data archive for ``Testing the Electrodynamic Method to Derive Height-Integrated Ionospheric Conductances,'
<p>These files provide additional graphs and supplemental data to accompany the paper “Testing the Electrodynamic Method to Derive Height-Integrated Ionospheric Conductances,” submitted to the journal <em>Annales Geophysicae </em>(paper ID angeo-2020-60)<em>. </em> Additional information is contained in the included documents READ_ME.pdf and Supporting_Information.pdf.</p> <p> </p>
Archived GBIF Dataset: National Botanic Garden Belgium - Martius
<p>This dataset was archived from GBIF on 2020-09-10. More up to date data on the specimens inside can be found in the <a href="https://doi.org/10.15468/wrthhx">Meise Botanic Garden Herbarium dataset</a>.</p> <p><strong>Description</strong></p> <p>Martius database is part of the ENBI WP13 feasibility study (Collaborative project between the Royal Belgian Institute of Natural Sciences, the Royal Museum for Central Africa and the National Botanical Garden). The data portal for the ENBI WP13 study can be found at <a href="http://projects.bebif.be/enbi">http://projects.bebif.be/enbi</a></p>
Archived GBIF Dataset: National Botanic Garden Belgium - Myxomycetes
<p>This dataset was archived from GBIF on 2020-09-10. More up to date data on the specimens inside can be found in the <a href="https://doi.org/10.15468/wrthhx">Meise Botanic Garden Herbarium dataset</a>.</p> <p><strong>Description</strong></p> <p>A project which linked and extented five ongoing initiatives (Herbaria BR, M, MA, LE & UARK) to database myxomycete collections to create a global virtual herbarium using these databases via the GBIF network with an estimated total of 90,000 specimens, containing almost one third of all types. This joint virtual herbarium enables taxonomists to access sufficiently large series of specimens. For BR all the data of the Herbarium of Mrs Nannenga Bremekamp was made accessible, also the collections of Dr J. Rammeloo and other important collections were put on the web. In total 22.857 records are made accessible, of which 11.583 records with geographical coordinates.</p>
Archived GBIF Dataset: Central African Plants
<p>This dataset was archived from GBIF on 2020-09-10. More up to date data on the specimens inside can be found in the <a href="https://doi.org/10.15468/wrthhx">Meise Botanic Garden Herbarium dataset</a>.</p> <p><strong>Description</strong></p> <p>Reference collections of plant material from Central Africa (DR Congo, Rwanda and Burundi). Digitizing specimen information is the first crucial step in the realisation of a widely accessible ‘working list of known plant species’ for this region and is an important tool for repatriation of knowledge to the countries of origin. In this first stage, we focussed on three families: Rubiaceae, Balsaminaceae and Orchidaceae.</p> <p><strong>Geographic scope</strong></p> <p>DR Congo, Rwanda and Burundi</p>
Video archive for "Forest area change in the shifting landscape mosaic of the continental United States from 2001 to 2016"
<p>The videos animate landscape mosaic change at four scales for each of 14 geographic regions. Documentation is contained in the supplementary information for the open-access publication "Forest Area Change in the Shifting Landscape Mosaic of the Continental United States from 2001 to 2016" DOI: 10.3390/land9110417</p>
Data from: Data management, archiving and sharing for biologists and the role of research institutions in the technology-oriented age
Data are one of the primary outputs of science. Although certain sub-disciplines of biology have pioneered efforts to ensure their long-term preservation and facilitate collaborations, data continue to disappear, owing mostly to technological, regulatory and ideological hurdles. In this review, we describe the important steps towards proper data management and archiving, and provide a critical discussion on the importance of long term data conservation. We then illustrate the rise in data archiving through the Joint Data Archiving Policy and the Dryad Digital Repository. In particular, we discuss data integration and how the limited availability of large scale datasets can hinder new discoveries. Finally, we propose solutions to increase the rate of data preservation. For example, by generating mechanisms insuring proper data management and archiving, by providing training in data management, and by transforming the traditional role of research institutions and libraries as data generators towards managers and archivers.
Data for: Fossil samples archive functional diversity in marine ecosystems: An empirical test from a present-day coastal environment (Tyler and Kowalewski)
<p>Data associated with "Fossil samples archive functional diversity in marine ecosystems: An empirical test from a present-day coastal environment" by Carrie L. Tyler and Michal Kowalewski. Data include GPS coordinates for sample localities, variables quantifying multivariate space for all three assemblages, trait data for all species, and the associated R code (Functional Fidelity.zip). Abundance data is available in Tyler and Kowalewski (2023) <a href="https://doi.org/10.7717/peerj.15574">10.7717/peerj.15574</a> at <strong><a href="https://github.com/tylercl/Multi-Taxic-Fidelity">https://github.com/tylercl/Multi-Taxic-Fidelity</a> </strong>(DOI: 10.5281/zenodo.7871639).</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.