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1,138 results for “cryptic diversity”
Figures 14-15 from: Huemer P, Karsholt O, Mutanen M (2014) DNA barcoding as a screening tool for cryptic diversity: an example from Caryocolum, with description of a new species (Lepidoptera, Gelechiidae). ZooKeys 404: 91-111. https://doi.org/10.3897/zookeys.404.7234
Figures 14-15 - Female genitalia. 14 Caryocolum crypticum sp. n., holotype, slide GEL 1234 P.Huemer 15 Caryocolum crypticum sp. n., paratype, Italy, slide GEL 1232 P.Huemer.
Figures 6-7 from: Huemer P, Karsholt O, Mutanen M (2014) DNA barcoding as a screening tool for cryptic diversity: an example from Caryocolum, with description of a new species (Lepidoptera, Gelechiidae). ZooKeys 404: 91-111. https://doi.org/10.3897/zookeys.404.7234
Figures 6-7 - Male genitalia. 6 Caryocolum crypticum sp. n., paratype, Italy, slide GU 86/041 P.Huemer 7 Caryocolum crypticum sp. n., paratype, Italy, slide GEL 1215 P.Huemer.
Figure 1 from: Guo H-F, Guan B, Shi F-M, Zhou Z-J (2016) DNA Barcoding of genus Hexacentrus in China reveals cryptic diversity within Hexacentrus japonicus (Orthoptera, Tettigoniidae). ZooKeys 596: 53-63. https://doi.org/10.3897/zookeys.596.8669
Figure 1 - Barcode gap plot showed the distance to the nearest neighbor (NN) vs. the maximum intraspecific distance Kimura-2-parameter (K2P) for 83 specimens. Dots above the 1:1 line indicated the presence of a barcode gap.
Figure 2 from: Guo H-F, Guan B, Shi F-M, Zhou Z-J (2016) DNA Barcoding of genus Hexacentrus in China reveals cryptic diversity within Hexacentrus japonicus (Orthoptera, Tettigoniidae). ZooKeys 596: 53-63. https://doi.org/10.3897/zookeys.596.8669
Figure 2 - Taxon ID tree revealed seven well-differentiated haplogroups. Process ID, location, and BINs were shown in the tree. The clusters with a blue box indicated there may be two new putative 'cryptic species' within Hexacentrus japonicus. The clade with a black box indicated the specimen had more mutation within Hexacentrus unicolor.
Supplementary material 1 from: Nazari V, Lukhtanov VA, Naderi A, Fric ZF, Dincă V, Vila R (2023) More hidden diversity in a cryptic species complex: a new subspecies of Leptidea sinapis (Lepidoptera, Pieridae) from Northern Iran. Comparative Cytogenetics 17: 113-128. https://doi.org/10.3897/compcytogen.17.102830
Material examined and GenBank accessions
Data from: Integrative species delimitation reveals cryptic diversity in the southern Appalachian Antrodiaetus unicolor (Araneae: Antrodiaetidae) species complex
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Data from: Coalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus Protoparmelia (Lecanorales, Ascomycota)
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Data from: Nomenclature for the nameless: a proposal for an integrative molecular taxonomy of cryptic diversity exemplified by planktonic foraminifera
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Cryptic genetic diversity and cytonuclear discordance characterize contact among Canada jay (Perisoreus canadensis) morphotypes in western North America
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Data from: Two novel genera and one new species of treefrog (Anura: Rhacophoridae) highlight cryptic diversity in the Western Ghats of India
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Data from: Cryptic diversity and discordance in single-locus species delimitation methods within horned lizards (Phrynosomatidae: Phrynosoma)
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Data from: The cryptic and the apparent reversed: lack of genetic differentiation within the morphologically diverse plexus of the planktonic foraminifer Globigerinoides sacculifer
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Figure 1 from: Lim BK, Loureiro LO, Garbino GST (2020) Cryptic diversity and range extension in the big-eyed bat genus Chiroderma (Chiroptera, Phyllostomidae). ZooKeys 918: 41-63. https://doi.org/10.3897/zookeys.918.48786
Figure 1 First record of the big-eyed bat Chiroderma improvisum from Nevis (ROM 126002).
Figure 7 from: Lim BK, Loureiro LO, Garbino GST (2020) Cryptic diversity and range extension in the big-eyed bat genus Chiroderma (Chiroptera, Phyllostomidae). ZooKeys 918: 41-63. https://doi.org/10.3897/zookeys.918.48786
Figure 7 Dorsal view of the skin of the holotype of Chiroderma gorgasi (USNM 309903).
Appendix 8 in Morphometry and DNA barcoding reveal cryptic diversity in the genus Enteromius (Cypriniformes: Cyprinidae) from the Congo basin, Africa
Appendix 8. PC loadings of the PCA in Fig. 9. Most important loadings indicated in bold.
Appendix 6 in Morphometry and DNA barcoding reveal cryptic diversity in the genus Enteromius (Cypriniformes: Cyprinidae) from the Congo basin, Africa
Appendix 6. PC loadings of the PCA in Fig. 7. Most important loadings indicated in bold.
Data from: DNA barcoding reveals cryptic diversity in the peanut worm Sipunculus nudus
Peanut worm (Sipunculus nudus) is a cosmopolitan species mainly distributed in tropical and subtropical coastal waters. Analysis of the mitochondrial cytochrome c oxidase subunit I (COI) gene sequences among S. nudus from GenBank revealed high genetic variation (p-distance, 0.115–0.235; k2p, 0.128–0.297) and paraphyletic relationships. These indicated misidentification and/or cryptic diversity may be present in the genus Sipunculus. To understand the genetic diversity and to manage the recourse of S. nudus, we collected specimens from coastal waters of southern China and Taiwan. In the phylogenetic topology, specimens can be separated into four distinct clades; three of these clades (clade A, B and C) were only represented from this region (southern China and Taiwan), but the clade D grouped with individuals from Central America (Atlantic coast). Furthermore, individuals of clades A and D were collected at the same location, which does not support the hypothesis that this genetic break reflects contemporary geographical isolation. The four distinct clades observed among coastal waters of southern China and Taiwan indicated underestimated diversity. It is noteworthy that the cryptic diversity is vulnerable under high pressure of human activity.
Data from: Cryptic habitats and cryptic diversity: unexpected patterns of connectivity and phylogeographic breaks in a Mediterranean endemic marine cave mysid
The marine cave-dwelling mysid Hemimysis margalefi is distributed over the whole Mediterranean Sea which contrasts with the poor dispersal capabilities of this brooding species. In addition, underwater marine caves are a highly fragmented habitat which further promotes strong genetic structuring, therefore providing highly informative data on the levels of marine population connectivity across biogeographic regions. This study investigates how habitat and geography have shaped the connectivity network of this poor disperser over the entire Mediterranean Sea through the use of several mitochondrial and nuclear markers. Five deeply divergent lineages were observed among H. margalefi populations resulting from deep phylogeographic breaks, some dating back to the Oligo-Miocene. Whether looking at the intra-lineage or inter-lineage levels, H. margalefi populations present a high genetic diversity and population structuring. This study suggests that the five distinct lineages observed in H. margalefi actually correspond to as many separate cryptic taxa. The nominal species, H. margalefi sensu stricto, corresponds to the westernmost lineage here surveyed from the Alboran Sea to south-eastern Italy. Typical genetic breaks such as the Almeria-Oran Front or the Sicilo-Tunisian Strait do not appear to be influential on the studied loci in H. margalefi sensu stricto. Instead, population structuring appears more complex and subtle than usually found for model species with a pelagic dispersal phase. The remaining four cryptic taxa are all found in the eastern basin, but incomplete lineage sorting is suspected and speciation might still be in process. Present day population structure of the different H. margalefi cryptic species appears to result from past vicariance events started in the Oligo-Miocene and maintained by present day coastal topography, water circulation and habitat fragmentation.
Fig. 1 in Extensive cryptic diversity in the cosmopolitan sludge worm Limnodrilus hoffmeisteri (Clitellata, Naididae)
Fig. 1 Sampling locations represented by triangles
Figure 7 from: Korhonen A, Seelan JSS, Miettinen O (2018) Cryptic species diversity in polypores: Skeletocutis nivea species complex. MycoKeys 36: 45-82. https://doi.org/10.3897/mycokeys.36.27002
Figure 7 Spores of selected species in the Skeletocutis nivea complex.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
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