Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

8,071

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

8,071 results for “transcriptome analysis”

Learn how ShareScore rates datasets ↗
geo24/100

Transcriptome analysis of ∆scgA at three time points

GEO Series GSE59886. Streptomyces chattanoogensis. 18 samples. Type: Expression profiling by array.

openGEO-OpenJul 2014View details →
geo24/100

Transcriptomic analysis of wild type and Nr4a1-/- adipose progenitors.

GEO Series GSE118879. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2018View details →
geo24/100

Comparative Transcriptomic Analysis of Mouse Macrophages Infected with Live Attenuated Vaccine Strains of Mycobacterium tuberculosis

GEO Series GSE290804. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Transcriptomic analysis of adipose and muscle of dairy calves supplemented with 5-hydroxytryptophan

GEO Series GSE151781. Bos taurus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2020View details →
geo24/100

A single-cell transcriptomic analysis of endometriosis

GEO Series GSE213216. Homo sapiens. 51 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2022View details →
geo24/100

Transcriptome analysis of the rshA mutant

GEO Series GSE52039. Corynebacterium glutamicum R. 10 samples. Type: Expression profiling by array.

openGEO-OpenNov 2014View details →
geo24/100

Transcriptome profile analysis of breast muscle tissues from high or low levels of atmospheric ammonia exposed broilers (Gallus gallus)

GEO Series GSE85786. Gallus gallus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2016View details →
geo24/100

Transcriptomic analysis reveals autophagy flux variation within mouse pancreatic cancer organoids

GEO Series GSE145766. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2020View details →
geo24/100

Transcriptome analysis of the rsdA deletion mutant using the oligo array

GEO Series GSE102325. Corynebacterium glutamicum R; Corynebacterium glutamicum. 2 samples. Type: Expression profiling by array.

openGEO-OpenJul 2018View details →
geo24/100

Transcriptome analysis of tumors isolated from ovarian cancer tumor bearing mice treated with Sindbis Virus vectors and untreated controls

GEO Series GSE216750. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2022View details →
geo24/100

Transcriptome analysis of differentiating 3T3L1 mouse pre-adipocytes with knock-down of Tmem120a and Tmem120b

GEO Series GSE150022. Mus musculus. 11 samples. Type: Expression profiling by array.

openGEO-OpenNov 2021View details →
geo24/100

Transcriptomic analysis of an archived bladder cancer cohort

GEO Series GSE59483. Homo sapiens. 67 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2017View details →
geo24/100

Transcriptomic analysis of the follicle associated epithelium of Peyer's Patches, intestinal villous epithelium and ileum from young and aged mice

GEO Series GSE182252. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2021View details →
geo24/100

Transcriptomic analysis of Wt Mtb H37Rv and WhiB4 Complemented strains on treatment with 0.25 mM Cumene hydroperoxide (CHP) for 2 h at 37°C.

GEO Series GSE114045. Mycobacterium tuberculosis H37Rv. 6 samples. Type: Expression profiling by array.

openGEO-OpenMay 2018View details →
geo24/100

Microarray transcriptome analysis of primary mouse microglia cells treated with NGF

GEO Series GSE97918. Mus musculus. 14 samples. Type: Expression profiling by array.

openGEO-OpenApr 2020View details →
geo24/100

Transcriptome analysis reveals malignant and hypoxic signature of glioblastoma

GEO Series GSE77307. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2019View details →
geo24/100

Transcriptome analysis of Aochk1 in nematode-trapping fungus Arthrobotrys oligospora

GEO Series GSE301452. Orbilia oligospora. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →
geo24/100

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and hnRNPA2B1-KO sw480 cell line Transcriptomes

GEO Series GSE169211. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2021View details →
geo24/100

Transcriptomic Analysis of Inflammatory Responses in Bovine Mammary Epithelial Cells following Stimulation with Escherichia coli and Staphylococcus aureus

GEO Series GSE139612. Bos taurus. 4 samples. Type: Expression profiling by array.

openGEO-OpenApr 2020View details →
geo24/100

Fate mapping of human P63+ progenitor in vivo by single cell transcriptomic analysis [scRNA_seq]

GEO Series GSE260778. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record