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1,258
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Dataset results
1,258 results for “neuroblastoma”
TPX2 as key downstream target of the eIF4A controlled translational program in MYCN driven neuroblastoma[RNA-Seq]
GEO Series GSE246725. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNAseq of human neuroblastoma
GEO Series GSE223374. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
c-MYC drives neuroblastoma tumorigenesis and retinoic acid resistance in zebrafish [RNA-Seq]
GEO Series GSE99567. Danio rerio. 12 samples. Type: Expression profiling by high throughput sequencing.
Expression data of CFC1 overexpressed neuroblastoma cell line, NGP
GEO Series GSE90790. Homo sapiens. 8 samples. Type: Expression profiling by array.
Credentialling a c-MYC-driven genetic neuroblastoma model
GEO Series GSE253185. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Credentialling a c-MYC–driven genetic neuroblastoma model for pre-clinical studies
GEO Series GSE254964. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Study on the mechanism of DLX5 interaction with MYCN in the occurrence and development of neuroblastoma
GEO Series GSE249951. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ER stress impairs the insulin signaling pathway through mitochondrial damage in SH-SY5Y human neuroblastoma cells (part 2)
GEO Series GSE24499. Homo sapiens. 6 samples. Type: Expression profiling by array.
Analysis of the transcriptome of undifferentiated SH-SY5Y neuroblastoma cells following AS3MT knockout with CRISPR/Cas9.
GEO Series GSE182157. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Genome methylation defines EZH2 inhibitor resistance in neuroblastoma [I]
GEO Series GSE143713. Homo sapiens. 24 samples. Type: Expression profiling by array.
DNA Damage Response Deficiency Enhances Neuroblastoma Progression and Sensitivity to Combination PARP and ATR Inhibition
GEO Series GSE283976. Danio rerio. 11 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome and translatome profiling of CPX 24h effects in neuroblastoma cells CHP134
GEO Series GSE53187. Homo sapiens. 12 samples. Type: Expression profiling by array.
TPX2 as key downstream target of the eIF4A controlled translational program in MYCN driven neuroblastoma
GEO Series GSE216191. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell landscape analysis reveals distinct regression trajectories and novel prognostic biomarkers in primary neuroblastoma
GEO Series GSE287352. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
Genotyping in Neuroblastoma Primary tumors
GEO Series GSE19385. Homo sapiens. 648 samples. Type: Genome variation profiling by genome tiling array; Genome variation profiling by SNP array.
Transcriptome analysis of tumors from Olfactory neuroblastoma patients
GEO Series GSE102285. Homo sapiens. 5 samples. Type: Expression profiling by array.
Transcriptomic Profiling of 39 Neuroblastoma Cell Lines
Neuroblastoma cell lines are an important and cost-effective model used to study oncogenic drivers of the disease. While many of these cell lines have been previously characterized with SNP, methylation, and/or expression microarrays, there has not been an effort to comprehensively sequence these cell lines. Here, we present raw whole transcriptome data generated by RNA sequencing of 39 commonly-used neuroblastoma cell lines. This data can be used to perform differential expression analysis based on a genetic aberration or phenotype in neuroblastoma (eg: MYCN amplification status, ALK mutation status, 11q status, sensitivity to pharmacological pertubation). Additionally, we designed this experiment to enable structural variant and/or long-noncoding RNA analysis across these cell lines. Finally, as more DNase/ATAC and histone/transcription factor ChIP sequencing is performed in these cell lines, our RNA-Seq data will be an important complement to inform transcriptional targets as well as regulatory (enhancer or repressor) elements in neuroblastoma.
International Neuroblastoma Risk Group (INRG)
The INRG task force has established a database containing information on over 22,000 children with neuroblastoma from around the world. These data are available to investigators from around the world for data mining studies, and significant discoveries have already been made using this unique resource. The patient data included in this database comes from cooperative groups: Children's Oncology Group (COG), Gesellschaft fur Padiatrische Onkologie und Hamatologie (GPOH), Neuroblastoma Committee of Japan Children's Cancer Group (JCCG), Japanese Infantile Neuroblastoma Co-operative Study Group (JINCS), and Society of Paediatric Oncology Europe Neuroblastoma Group (SIOPEN). The amount of data continues to expand, as the cooperative groups have agreed to update existing patient data and add new patient data once clinical trials are completed and the objectives of the trial are published.
Profiling the transcriptional heterogeneity of diverse pediatric solid tumors - Neuroblastoma
For more information, including a more complete description, data generator contact information, and reference, please see: https://scpca.alexslemonade.org/projects/SCPCP000004.
Neuroblastoma (NBL)
The TARGET Neuroblastoma projects elucidate comprehensive molecular characterization to determine the genetic changes that drive the initiation and progression of high-risk or hard-to-treat childhood cancers. Neuroblastoma (NBL) is a cancer that arises in immature nerve cells of the sympathetic nervous system, primarily affecting infants and children.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.