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5,864 results for “species diversity”
Data from: Diversity of Andean shrubland puna butterflies of the genus Punargentus (Nymphalidae, Satyrinae, Satyrini, Pronophilina) with the description of two new species and two new subspecies
<p>Two new species and two new subspecies of the satyrine butterfly genus <em>Punargentus </em>Heimlich – <em>P. atusparia </em>n. sp., <em>P. heimlichi </em>n. sp., <em>P. blanchardi libertas </em>n. ssp. and<em> P. atusparia yupania </em>n. ssp.<em> </em>– are described from north-central Peru (Áncash, Huánuco and La Libertad). The affinities of the new taxa are evaluated based on molecular data obtained by target enrichment and COI barcoding. <em>Punargentus </em>is fully supported and divides into two branches, <em>P. lamna </em>clade with four species, and <em>P. blanchardi </em>clade with three species, two of which described here. The species of the <em>P. blanchardi </em>clade occur in Andean shrubland, at 2800-3600 m, whereas those of <em>P. lamna </em>clade are found in puna grassland at 3600-4600 m, with occasional overlapping. Considered their habitat preference, none of the newly described species requires immediate conservation measures.</p>
Artificial light at night (ALAN) decreases plant diversity and performance in experimental grassland communities – Data on species biomass and traits
<p>Artificial light at night (ALAN) affects many areas of the world and is increasing globally. To date, there has been limited and inconsistent evidence regarding the consequences of ALAN on plant communities as well as the fitness of their constituent species. ALAN could be beneficial for plants as they need light as an energy source, but they also need darkness for regeneration and growth. We created model communities composed of 16 plant species sown, exposed to a gradient of ALAN ranging from 'moonlight only' to conditions like situations typically found directly underneath a streetlamp. We measured plant community composition and its production (biomass), as well as functional traits of three plant species from different functional groups (grasses, herbs, legumes) in two separate harvests. We found that biomass was reduced by 33% in the highest ALAN treatment compared to the control, Shannon diversity decreased by 43% and Evenness by 34% in the first harvest. Some species failed to establish in the second harvest. Specific leaf area, leaf dry matter content and leaf hairiness responded to ALAN. These responses suggest that plant communities will be sensitive to increasing ALAN, and they flag a need for plant conservation activities that consider impending ALAN scenarios.</p>
Dominant species establishment may influence invasion resistance more than phylogenetic or functional diversity
<ol> <li>Phylogenetic and functional diversity are theorized to increase invasion resistance. Experimentally testing whether plant communities higher in these components of diversity are less invasible is an important step for guiding restoration designs.</li> <li>To investigate how phylogenetic and functional diversity of vegetation affect invasion resistance in a restoration setting, we used experimental prairie restoration plots. The experiment crossed three levels of phylogenetic diversity with two levels of functional diversity while species richness was held constant. We allowed invaders to colonize plots; these included native species from neighboring plots and non-native invasive species from a surrounding old field. We tested if invader biomass was influenced by phylogenetic and functional diversity, and phylogenetic and hierarchical trait distances between invaders and planted species. We binned each invader into three categories: native species from neighboring experimental plots (site-specific invaders); native species not part of the experimental species pool (native invaders); or non-native species (non-native invaders).</li> <li>Counter to expectation, both non-native and native invaders became more abundant in more phylogenetically diverse plots. However, plots with higher abundance of planted Asteraceae, a dominant family of the tallgrass prairie, had lower invader biomass for both native and non-native invaders.</li> <li>We also found that hierarchical trait differences shaped invasion. The species that became most abundant were non-native invaders that were taller, and native invaders with low specific leaf area relative to planted species. Site-specific invaders were not influenced by any plot-level diversity metrics tested.</li> <li> <em>Synthesis and application</em>: Our results suggest greater phylogenetic diversity may lower resistance to invasion. This effect may be due to more even but sparser niche packing in high-diversity plots, associated with greater availability of unsaturated niche space for colonization. However, trait composition fostered invasion resistance in two ways in our study. First, establishment of native species with strongly dominant traits may confer invasion resistance. Second, species mixes that optimize trait differences between planted vegetation and likely invaders may enhance invasion-resistance.</li> </ol>
Spatial patterns of phylogenetic and species diversity of Fennoscandian vascular plants in protected areas
<p>Protected areas are one of the main strategic means for conserving biodiversity. Yet, the design of protected areas usually neglects phylogenetic diversity, an important diversity measure. In this paper, we assess the phylogenetic diversity and species richness of vascular plants in Fennoscandian protected areas. We evaluate how much species richness and phylogenetic diversity is found within and outside protected areas, and the differences in diversity between different categories of protected areas. We also assess the differences in the diversity-area relationship of the different protected area categories in terms of both species richness and phylogenetic diversity. We build a multi-locus phylogeny of 1,519 native vascular plants of Norway, Sweden, and Finland. We estimate the phylogenetic diversity and species richness by combining the phylogeny with publicly available occurrence data and the currently protected area system of Fennoscandia. Our results indicate that protected areas in Fennoscandia hold more diversity when larger, and that phylogenetic diversity increases faster with area than species richness. We found evidence for more diversity outside of protected areas of the different countries of Fennoscandia than inside of protected areas, but no evidence for diversity differences between areas with different protection status. Hence, our results indicate that the current protected area system in Fennoscandia is no more effective in conserving phylogenetic diversity and species richness of vascular plants than a random selection of localities. Our results also indicate that planning conservation strategies around phylogenetic diversity, rather than species richness, might be more effective in protecting vascular plant diversity.</p>
Dynamic social interactions and keystone species shape the diversity and stability of mixed-species biofilms – an example from dairy isolates - Dataset
<p>We previously reported a bacterial four-species biofilm model comprising <i>Stenotrophomonas rhizophila </i>(SR), <i>Bacillus licheniformis </i>(BL), <i>Microbacterium lacticum </i>(ML), and <i>Calidifontibacter indicus</i> (CI) that were isolated from the surface of a dairy pasteuriser after cleaning and disinfection. These bacteria produced 3.13-fold more biofilm mass compared to the sum of biofilm masses in monoculture (<a href="https://doi.org/10.3389/fmicb.2023.1159434">https://doi.org/10.3389/fmicb.2023.1159434</a>). In a subsequent experiment we confirmed that the observed community synergy resulted from dynamic social interactions among various species pairs, encompassing commensalism, exploitation, and amensalism. <i>M. lacticum</i> appeared to be the keystone species as it increased the growth of all other species that led to the synergy in biofilm mass. Interactions among the other three species (in the absence of <i>M. lacticum</i>) also contributed towards the synergy in biofilm mass. Bacterial cell-free-supernatants were also investigated to assess the nature of the observed synergy. The first four sheets of the Excel file contain raw cell count data for the four species (SR, BL, ML, and CI), recorded every 4 h over a 24 h period on the surface of stainless steel (SS) in the presence of brain-heart-infusion (BHI) medium and skim-milk (SM). Data related to individual bacterial cell counts in various mixed-species biofilms are also presented. These biofilms were developed on SS in BHI for h. Data related to bacterial biofilm masses in different mixed-species biofilm combinations are also presented, showcasing the effect of replacing one strain with its CFS. Species written in red indicate that their CFS was used, not their viable form. </p>
Is the USDA core collection of common bean representative of genetic diversity of the species, as assessed by SNP diversity?
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Cell size-dependent species sensitivity to nanoparticles underlies changes in phytoplankton diversity and productivity
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Data from: Beyond Rocky Mountain spotted fever: Investigation of the presence and diversity of spotted fever <em>Rickettsia</em> species in ticks submitted from forestry workers
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Data for: Patterns of species diversity in a network of artificial wetlands
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Nectar values from: Turnover in floral composition explains species diversity and temporal stability in the nectar supply of urban residential gardens
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Determinants of genetic diversity and species richness of North American amphibians
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Data from: Multiple facets of diversity effects on plant productivity: species richness, functional diversity, species identity and intraspecific competition
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Global patterns and drivers of herbivorous eriophyoid mite species diversity
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Data from: Differential effects of pollen nutritional quality on male and female reproductive success across plant species within a diverse co-flowering community
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Data from: Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity
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Plant and frugivore species characteristics drive frugivore contributions to seed dispersal effectiveness in a hyper-diverse community
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Data from: Do temperate tree species diversity and identity influence soil microbial community function and composition?
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Reduced genetic diversity associated with the northern expansion of an amphibian species with high habitat-specialization, Ascaphus truei, resolved using two types of genetic markers
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Data from: Is genomic diversity a useful proxy for census population size? Evidence from a species-rich community of desert lizards
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Data from: Shading enhances plant species richness and diversity on an extensive green roof
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.