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Dataset related to article "Computer-aided assessment of the extra-cellular matrix during pancreatic carcinogenesis: a pilot study."
<p>BACKGROUND:</p> <p>A hallmark of pancreatic ductal adenocarcinoma is the desmoplastic reaction, but its impact on the tumor behavior remains controversial. Our aim was to introduce a computer -aided method to precisely quantify the amount of pancreatic collagenic extra-cellular matrix, its spatial distribution pattern, and the degradation process.</p> <p>METHODS:</p> <p>A series of normal, inflammatory and neoplastic pancreatic ductal adenocarcinoma formalin-fixed and paraffin-embedded Sirius red stained sections were automatically digitized and analyzed using a computer-aided method.</p> <p>RESULTS:</p> <p>We found a progressive increase of pancreatic collagenic extra-cellular matrix from normal to the inflammatory and pancreatic ductal adenocarcinoma. The two-dimensional fractal dimension showed a significant difference in the collagenic extra-cellular matrix spatial complexity between normal versus inflammatory and pancreatic ductal adenocarcinoma. A significant difference when comparing the number of cycles necessary to degrade the pancreatic collagenic extra-cellular matrix in normal versus inflammatory and pancreatic ductal adenocarcinoma was also found. The difference between inflammatory and pancreatic ductal adenocarcinoma was also significant. Furthermore, the mean velocity of collagenic extra-cellular matrix degradation was found to be faster in inflammatory and pancreatic ductal adenocarcinoma than in normal.</p> <p>CONCLUSION:</p> <p>These findings demonstrate that inflammatory and pancreatic ductal adenocarcinomas are characterized by an increased amount of pancreatic collagenic extra-cellular matrix and by changes in their spatial complexity and degradation. Our study defines new features about the pancreatic collagenic extra-cellular matrix, and represents a basis for further investigations into the clinical behavior of pancreatic ductal adenocarcinoma and the development of therapeutic strategies.</p>
Jakmall Computer & Laptop Data Crawling
<p>The data we take is product data about computers and laptops sold by an e-commerce named Jakmall. The dataset contains 7 columns and 60 product lines about the most popular computers and laptops. Data scrapped at February 18th 2020. The name column contains the name of the seller who sells the product. The Location column contains the city information of the seller's offline store location. The product column contains the product name. The product_price column contains information on the selling price of one product. The product_wishlistcount column contains numbers that show how many products are used as a wish list that potential buyers want to buy.</p>
Data from: Non-random association of MHC-I alleles in favor of high diversity haplotypes in wild songbirds revealed by computer-assisted MHC haplotype inference using the R package MHCtools
<p><strong>Data set from:</strong></p> <p>Roved J., Hansson B., Stervander, M., Hasselquist D., & Westerdahl H. (2020). Non-random association of MHC-I alleles in favor of high diversity haplotypes in wild songbirds revealed by computer-assisted MHC haplotype inference using the R package MHCtools.</p>
Targeted indication of imaging for detection of vesicoureteric reflux after pediatric febrile urinary tract infections based on a multiparametric computational tool
<p>This is the original data used for our study on differentiated indication of a voiding cystourethrography after pediatric febrile urinary tract infections. </p>
CCoDaMiC: A framework for Coherent Coordination of Data Migration and Computation platforms
<p>This dataset release supports the results presented in the paper</p> <p><strong>Chinmaya Kumar Dehury</strong>, Satish Narayana Srirama, Tek Raj Chhetri, CCoDaMiC: A Framework for Coherent Coordination of Data Migration and Computation Platforms. Future Generation Computer Systems</p> <p>URL: https://www.sciencedirect.com/science/article/pii/S0167739X19330924</p> <p> </p>
FIGURE 99 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 99. FMNH PR2081, Tyrannosaurus rex. Right second metatarsal (MTII) in medial (A), lateral (B), dorsal (C), and ventral (D) view. Scale =10 cm. Photographs by J. Weinstein.
FIGURE 85 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 85. FMNH PR2081, Tyrannosaurus rex. Right humerus in dorsal (A), ventral (B), proximal (C), and distal (D) views. Closeups of the anterior (E) and posterior (F) surfaces of the proximal end are included. Scale = 5 cm. Abbreviations in Appendix 1. Photographs by J. Weinstein.
FIGURE 101 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 101. FMNH PR2081, Tyrannosaurus rex. Right fourth metatarsal (MTIV) in medial (A), lateral (B), dorsal (C), and ventral (D) view. Scale =10 cm. Photographs by J. Weinstein.
FIGURE 72 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 72. Putative proatlas arch or atlantal rib in tyrannosaurid theropods. A-D, FMNH PR2081, Tyrannosaurus rex. Dorsal (left) and ventral (right) views of putative right (A, C) and left (B, D) elements; scale = 5 cm. Specimen orientation would be appropriate for either the proatlas or rib interpretation. E, FMNH PR308 (either Albertosaurus or Daspletosaurus), left dorsolateral view of craniovertebral joint showing putative proatlas elements in articulation. Photographs by J. Weinstein.
FIGURE 91 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 91. FMNH PR2081, Tyrannosaurus rex. Left pelvic girdle articulated. Scale = 30 cm. Photograph by J. Weinstein.
FIGURE 23 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 23. FMNH PR2081, Tyrannosaurus rex. Isolated left postorbital in medial (A) and lateral (B) view. Scale = 5 cm.
FIGURE 76 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 76. FMNH PR2081, Tyrannosaurus rex. Anterior view of head of left rib from p17. Scale = 5 cm. See Appendix 1 for abbreviations.
FIGURE 79. RTMP 91.36.500 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 79. RTMP 91.36.500, cf. Albertosaurus libratus. Dorsal view of partial gastral basket in articulation.
FIGURE 46 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 46. FMNH PR2081, Tyrannosaurus rex. Right articular in dorsal view, showing extra foramen aereum (fa). Other abbreviations in Appendix 1. Photograph by J. Weinstein.
FIGURE 109 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 109. FMNH PR2081, Tyrannosaurus rex. Muscle attachment scars on lateral surface of femur and subtrochanteric complex (stc). A, cast of left femur, lateral view. B, Cartoon interpretation of same specimen. C, Cast of right femur, lateral view. Abbreviations in Appendix 1.
FIGURE 102 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 102. FMNH PR2081, Tyrannosaurus rex. Right fifth metatarsal (MTV) in lateral (A) and medial (B) view. Scale =10 cm. Photographs by J. Weinstein.
FIGURE 100 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 100. FMNH PR2081, Tyrannosaurus rex. Right third metatarsal (MTIII) in medial (A), lateral (B), dorsal (C), and ventral (D) view. Scale = 10 cm. Photographs by J. Weinstein.
FIGURE 103 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 103. FMNH PR2081, Tyrannosaurus rex. Right metatarsus from proximal (above) and distal (below) view. Scale = 10 cm. Photographs by J. Weinstein.
FIGURE 98 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 98. FMNH PR2081, Tyrannosaurus rex. Right lateral distal tarsal in (clockwise from top) lateral, distal, medial, and proximal views. Scale = 5 cm.
FIGURE 104 in Osteology of Tyrannosaurus rex: insights from a nearly complete skeleton and high-resolution computed tomographic analysis of the skull
FIGURE 104. FMNH PR2081, Tyrannosaurus rex. Articulated right pes in anterior view. Photographs by J. Weinstein.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.