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3,292 results for “DNA Barcode”
FIGURES 53–60 in Taxonomy of Diamesa steinboecki group (Diptera: Chironomidae: Diamesinae) with description and DNA barcoding of known species. II. Subgroups davisi, leona and loeffleri
FIGURES 53–60. Adult males of Diamesa khumbugelida Saether et Willassen from Kazakhstan (53, 56), China (54, 57–58), Baikal Lake basin (59) and Tajikistan (55, 60). 53–54, hypopygium in dorsal view; 55, antenna; 56–60, transverse sternapodeme. Scale bars 50 μm.
FIGURE 68 in Taxonomy of Diamesa steinboecki group (Diptera: Chironomidae: Diamesinae) with description and DNA barcoding of known species. II. Subgroups davisi, leona and loeffleri
FIGURE 68. Bayesian inference (BI) trees based on the cytochrome c oxidase I (COI) nucleotide sequence data of the genus Diamesa Meigen and outgroup Pseudokiefferiella parva (Edwards) Bayesian posterior probabilities (higher than 0.7) are given above tree nodes. Specimens obtained in this study are in bold.
FIGURES 61–67 in Taxonomy of Diamesa steinboecki group (Diptera: Chironomidae: Diamesinae) with description and DNA barcoding of known species. II. Subgroups davisi, leona and loeffleri
FIGURES 61–67. Adult males of Diamesa loeffleri Reiss from Indian Himalayas (61) and Nepal Himalayas (62–67). 61–62, antenna; 63, distal part of anal point; 64–65, inferior volsellae; 66, hypopygium in dorsal view; 67, central part of hypopygium without tergite IX. Scale bar 50 μm.
FIGURE 20 in DNA barcodes reveal different speciation scenarios in the four North American Anthocharis Boisduval, Rambur, [Duménil] & Graslin, [1833] (Lepidoptera: Pieridae: Pierinae: Anthocharidini) species groups
FIGURE 20. Haplotype tree for North American Anthocharis. Sara group (Green—A. julia, Blue—A. sara, Red—A. thoosa), lanceolata group (Brown—nominotypical lanceolata, Orange—A. desertolimbus), cethura group (Red—A. cethura morrisoni, Orange—A. cethura pima and A. cethura catalina), midea group (Green—A. limonea and A. midea), Black—A. scolymus [outgroup].
FIGURE 27 in DNA barcodes reveal different speciation scenarios in the four North American Anthocharis Boisduval, Rambur, [Duménil] & Graslin, [1833] (Lepidoptera: Pieridae: Pierinae: Anthocharidini) species groups
FIGURE 27. Distribution of sampled individuals in the midea group. Anthocharis midea—upside down green triangles, Anthocharis limonea—pale blue triangles, erect green triangle—Anthocharis limonea phenotype with Anthocharis midea haplotype.
FIGURE 23 in DNA barcodes reveal different speciation scenarios in the four North American Anthocharis Boisduval, Rambur, [Duménil] & Graslin, [1833] (Lepidoptera: Pieridae: Pierinae: Anthocharidini) species groups
FIGURE 23. Distribution of Anthocharis sara group. Small red-filled circles—type localities of various names. Green-filled circles—Anthocharis julia, Blue-filled triangles—Anthocharis sara, Red-filled squares—Anthocharis thoosa.
FIGURE 21 in DNA barcodes reveal different speciation scenarios in the four North American Anthocharis Boisduval, Rambur, [Duménil] & Graslin, [1833] (Lepidoptera: Pieridae: Pierinae: Anthocharidini) species groups
FIGURE 21. Distribution of Anthocharis lanceolata group, six-pointed stars—nominotypical lanceolata, yellow-filled circle—southern Sierra Nevada lanceolata and subspecies australis, orange-filled circles—desertolimbus and San Pedro Martir population.
FIGURES 17–19 in DNA barcodes reveal different speciation scenarios in the four North American Anthocharis Boisduval, Rambur, [Duménil] & Graslin, [1833] (Lepidoptera: Pieridae: Pierinae: Anthocharidini) species groups
FIGURES 17–19. Fifth instar larval phenotypes of Anthocharis sara group species—17. A. sara, 18. A. thoosa, and 19. A. julia.
FIGURES 1–16 in DNA barcodes reveal different speciation scenarios in the four North American Anthocharis Boisduval, Rambur, [Duménil] & Graslin, [1833] (Lepidoptera: Pieridae: Pierinae: Anthocharidini) species groups
FIGURES 1–16. Adults of North American Anthocharis species. Male D, V, Female D, V—1–2 A. lanceolata, 3–4 A. desertolimbus, 5–6 A. sara, 7–8 A. julia, 9–10 A. thoosa, 11–12 A. cethura, 13–14 A. midea, 15–16 A. limonea.
FIGURES 20–25 in New or little-known taxa of Anurophorinae (Collembola) with anal spines from East Asia with notes on DNA barcode
FIGURES 20–25. Distal part of abdomen in genera with four anal spines on Abd.V: 20–21, Tetracanthella, T. wahlgreni (20) and T. stebaevae (21); 22–23, Blissia, B. glabra, after Rusek (1985) (22) and B. robusta (23); 24, Sibiracanthella (S. rara), 25, Dimorphacanthella (D. mediaseta). Anterior row of setae notated as a1, Md, a3, Mdl. s—s-seta. Most of lateral setae not shown.
FIGURES 6–10 in New or little-known taxa of Anurophorinae (Collembola) with anal spines from East Asia with notes on DNA barcode
FIGURES 6–10. Sahacanthella saoriae sp. nov.: 6, PAO and ocelli; 7, medial conical protuberance, lateral view; 8, Abd.IV– VI; 9, distal part of tibiotarsus 3; 10, Ant.3, lateral view, variability shown. Md—dorsal macroseta, s—s-seta.
FIGURES 17–19 in New or little-known taxa of Anurophorinae (Collembola) with anal spines from East Asia with notes on DNA barcode
FIGURES 17–19. Distal part of abdomen in Octodonthophora ornata: 17–18, common variant with 9 spines, latero-dorsal (17) and latero-ventral (18) views; 19, small male with 8 spines, latero-dorsal views, most of lateral setae not shown. For the abbreviations see the text.
FIGURES 11–16 in New or little-known taxa of Anurophorinae (Collembola) with anal spines from East Asia with notes on DNA barcode
FIGURES 11–16. Octodonthophora ornata: 11, chaetotaxy of body tergites; 12. PAO and ocelli; 13, appearance and macrochaetotaxy; 14, furca; 15, Abd.IV–VI, dorsal view; 16, Th.II. Abbreviations as in Figs 1–5.
FIGURES 1–5 in New or little-known taxa of Anurophorinae (Collembola) with anal spines from East Asia with notes on DNA barcode
FIGURES 1–5. Sahacanthella kele (1, 4) and S. saoriae sp. nov. (2, 3, 5): 1–2, chaetotaxy of body tergites; 3–4, distal part of furca in individuals with the least number of setae on dens, variation (3) shown, lateral view; 5, furca, posterior view. Mdl, Ml—dorso-lateral and lateral macroseta, s, ms—s-setae and ms-seta.
Supplementary material 1 from: Skowron Volponi MA, Volponi P (2017) A new species of wasp-mimicking clearwing moth from Peninsular Malaysia with DNA barcode and behavioural notes (Lepidoptera, Sesiidae). ZooKeys 692: 129-139. https://doi.org/10.3897/zookeys.692.13587
Video of Pyrophleps ellawi in natural habitat : Explanation note: Supplementary video from the wild shows the behaviour and authentic postures of Pyrophleps ellawi. High resolution video available from Vimeo on: https://vimeo.com/230445159
Supplementary material 2 from: Skowron Volponi MA, Volponi P (2017) A new species of wasp-mimicking clearwing moth from Peninsular Malaysia with DNA barcode and behavioural notes (Lepidoptera, Sesiidae). ZooKeys 692: 129-139. https://doi.org/10.3897/zookeys.692.13587
Multiple alignment of barcode sequences : Explanation note: Multiple alignment of barcode sequences of the following species: Pyrophleps ellawi, P. vitripennis, Heterosphecia pahangensis (3 specimens), H. bantanakai, H. tawonoides, Aschistophleps longipoda.
Supplementary material 1 from: Estupiñán RA, Ferrari SF, Gonçalves EC, Barbosa MSR, Vallinoto M, Schneider MPC (2016) Evaluating the diversity of Neotropical anurans using DNA barcodes. ZooKeys 637: 89-106. https://doi.org/10.3897/zookeys.637.8637
Data on the specimens examined in the present study : Explanation note: Please note that some of the sequences used in the study are incompletely referenced in the GenBank barcode database because they lack some data and we are unable to rectify this because the samples were collected too long ago (1980s or before) for the missing data to be found.
Supplementary material 1 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2016) A DNA barcode library for ground beetles (Insecta, Coleoptera, Carabidae) of Germany: The genus Bembidion Latreille, 1802 and allied taxa. ZooKeys 592: 121-141. https://doi.org/10.3897/zookeys.592.8316
Barcode analysis using the BOLD workbench : Explanation note: Molecular distances based on the Kimura 2-parameter model of the analyzed specimens of the analyzed species of the genera Asaphidion, Bembidion, Ocys and Sinechostictus. Divergence values were calculated for all studied sequences, using the Nearest Neighbour Summary implemented in the Barcode Gap Analysis tool provided by the Barcode of Life Data System (BOLD). Align sequencing option: BOLD aligner (amino acid based HMM), ambiguous base/gap handling: pairwise deletion. ISD = intraspecific distance. BINs are based on the barcode analysis from 01-02-2016. Asterisks indicate species not recorded from Germany. Species with intraspecific maximum pairwise distances >2.2% and species pairs with interspecific distances <2.2% are marked in bold. Country codes: A = Austria, B = Belgium, CZ = Czech Republic, D = Germany, F = France, I = Italy, S = Sweden and SLO = Slovenia.
Supplementary material 2 from: Raupach MJ, Hannig K, Morinière J, Hendrich L (2016) A DNA barcode library for ground beetles (Insecta, Coleoptera, Carabidae) of Germany: The genus Bembidion Latreille, 1802 and allied taxa. ZooKeys 592: 121-141. https://doi.org/10.3897/zookeys.592.8316
Neighbor joining topology : Explanation note: Neighbor joining topology of all analyzed carabid beetles based on Kimura 2-parameter distances. Specimens are classified using ID numbers from BOLD and species name. Numbers next to nodes represent non-parametric bootstrap values (1,000 replicates, in %).
Supplementary material 2 from: Hogendoorn K, Stevens M, Leijs R (2015) DNA barcoding of euryglossine bees and the description of new species of Euhesma Michener (Hymenoptera, Colletidae, Euryglossinae). ZooKeys 520: 41-59. https://doi.org/10.3897/zookeys.520.6185
Phylogenetic relationships of euryglossine species based on CO1 sequence data: Explanation note: tree based on CO1 sequence data.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.