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14,866
datasets available to search
ShareScore release 0.9.0
Dataset results
14,866 results for “cancer cell”
GEP of PMBCs during treatment with a gene-modified allogeneic tumor cell vaccine in advanced renal cell cancer (RCC) patients
GEO Series GSE51490. Homo sapiens. 27 samples. Type: Expression profiling by array.
Direct cell-to-cell transfer in stressed tumor microenvironment aggravates tumorigenic or metastatic potential in pancreatic cancer
GEO Series GSE201876. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
CHD1 and H3K4me3 ChIP-seq in prostate cancer cell line PC-3
GEO Series GSE91401. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cancer-associated mutations in VAV1 trigger variegated signaling outputs and drive T cell lymphomagenesis
GEO Series GSE165006. Mus musculus. 10 samples. Type: Expression profiling by array.
Gene expression data from human breast cancer MCF-7 cells treated with siRNAs targeting long non-coding RNA TMPO-AS1
GEO Series GSE129004. Homo sapiens. 3 samples. Type: Expression profiling by array.
Gene expression profile of cancer cell lines of different origin
GEO Series GSE11812. Homo sapiens. 30 samples. Type: Expression profiling by array.
Genetic ablation of either G6P-isomerase or dual LDHA/B in colon cancer cells LS174T , +/- MPP+ (1-methyl-4-phenylpyridinium)
GEO Series GSE149289. Homo sapiens. 19 samples. Type: Expression profiling by array.
16 prostatic cancer cell lines and sensitivity to an anticancer tumor agent dasatinib
GEO Series GSE9633. Homo sapiens. 16 samples. Type: Expression profiling by array.
Inhibition of ABCB1 Overcomes Cancer Stem Cell-like Properties and Acquired Resistance to MET inhibitor in Non-Small Cell Lung Cancer
GEO Series GSE66604. Homo sapiens. 2 samples. Type: Expression profiling by array.
Genome-wide analysis in human colorectal cancer cells reveals ischemia-mediated expression of motility genes via DNA hypomethylation (expression)
GEO Series GSE58049. Homo sapiens. 9 samples. Type: Expression profiling by array.
Transcriptomic analysis (RNA-seq) of BRCA1-proficient and BRCA1-deficient ovarian cancer cells treated with the triazene compound CT913 and its metabolite CT913-M1
GEO Series GSE150377. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Effect of NF-kB inhibition and activation on gene expression in mouse and human lung cancer cell-lines
GEO Series GSE44619. Mus musculus; Homo sapiens. 19 samples. Type: Expression profiling by array.
Genome-wide RNA-expression analysis after p53 activation in colorectal cancer cells.
GEO Series GSE67109. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
S100P is a metastasis-associated gene that facilitates transendothelial migration of pancreatic cancer cells [HG-U133A]
GEO Series GSE19279. Homo sapiens. 15 samples. Type: Expression profiling by array.
SIX2 promotes cell plasticity via Wnt/beta-catenin signalling in androgen receptor independent prostate cancer (ChIP-seq)
GEO Series GSE235956. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ASCL1 represses a latent osteogenic program in small cell lung cancer in multiple cells of origin [ChIP-Seq]
GEO Series GSE155690. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
HMGB2 regulates the differentiation and stemness of exhausted CD8+ T cells during chronic viral infection and cancer.
GEO Series GSE237813. Mus musculus. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Transcriptomic analysis of therapy-induced senescent and diapause-like cancer cells
GEO Series GSE246690. Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing.
Genome-Wide Analysis of cell-free DNA Methylation Profiling for the Early Diagnosis of Pancreatic Cancer
<p>This dataset mainly contains analysis pipeline and R codes used in the corresponding paper。</p>
A dysfunctional T cell gene signature for predicting non-response to PD-1 blockade in non-small cell lung cancer that is suitable for routine clinical diagnostics
<p>Since PD-1 blockade is only effective in a minority of patients with advanced stage NSCLC, biomarkers are needed to guide treatment decisions. Tumor infiltration by PD-1T TILs, a dysfunctional tumor-infiltrating lymphocyte (TIL) pool with tumor-reactive capacity, can be detected by digital quantitative IHC and has been established as a novel predictive biomarker in NSCLC. To facilitate translation of this biomarker to the clinic, we here aimed to develop a robust RNA signature reflecting a tumor's PD-1T TIL status.,mRNA expression analysis using Nanostring was performed in baseline tumor samples from 41 advanced stage NSCLC patients treated with nivolumab that were selected based on PD-1T TIL infiltration by IHC. Samples were included as training cohort (n=41) to develop a predictive gene signature. This signature was independently validated in a second cohort (n=42). Primary outcome was disease control at 12 months (DC 12m) and secondary outcome was progression-free and overall survival. ,Regularized regression analysis yielded a signature using 12 out of 56 differentially expressed genes between PD-1T IHC high tumors from patients with DC 12m and PD-1T IHC low tumors from patients with progressive disease (PD). In the validation cohort 6/6 (100%) patients with DC 12m and 23/36 (64%) with PD were correctly classified with an NPV of 100% and a PPV of 32%.,The PD-1T mRNA signature showed a similar high sensitivity and high NPV as the digital IHC quantification of PD-1T TILs. This provides a straightforward approach allowing for easy implementation in a routine diagnostic clinical setting.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.