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151 results for “Reference dataset”
LsRTDv1: A reference transcript dataset for accurate transcript-specific expression analysis in lettuce
Open the record for dataset details and reuse information.
Pytroll reference magery from the NWCSAF/Geo v2018 test dataset
<p>Imagery generated with Satpy on the test dataset of the v2018 of the NWCSAF/Geo package. The testdata set is available from www.nwcsaf.org</p>
mGEMS Staphylococcus aureus reference dataset
<p>This dataset contains the <em>S. aureus</em> sequences (assembled with shovill v0.9.0), their sequence type 22 clades, and accession numbers used in the mGEMS publication as the reference dataset.</p>
Dataset for A Modified Approach for Process-Integrated Reference Point Determination
<p>The Global Geodetic Observing System (GGOS) calls for continues and automated determination of the geometric reference points of space-geodetic techniques such as DORIS, GNSS, SLR and VLBI. Whereas the reference points of DORIS beacons and GNSS antennas can simply be measured by observing well-defined reference markers, the determination of SLR and VLBI reference points are a metrological challenge, because these reference points are inaccessible and non-materialized. Indirect methods are needed to estimate the reference points in a rigorous way, which fulfil the requirements on an automated and continues reference point determination of the Global Geodetic Observing System. In this investigation, a modified approach for reference point determination of SLR and VLBI telescopes is presented. The results of the new approach are compared to proven reference point models. The numerical deviations of the estimated reference point coordinates and the axis-offset are <<50 μm and demonstrate the equivalence of the new approach.</p>
3D Deconvolution reference dataset
<p>Paired airy-light-sheet data with fluorescent bead and sample data acquired at NPL.</p>
FIGURE 38–39. Archive references. 38 in Taxonomic history and invasion biology of two Phyllonorycter leaf miners (Lepidoptera: Gracillariidae) with links to taxonomic and molecular datasets
FIGURE 38–39. Archive references. 38, the citation and the illustration of Tinea mespilella Hübner, 1805 from Hübner, J. 1796–1838. Sammlung europäischer Schmetterlinge. Achte Horde. Tineae Die Schaben; nach der Natur geordnet, beschrieben und vorgestellt: pl. 39, fig. 272. 39a, the title page of the list of specimens bearing Haworth's labels in the Thomas Henry Allis collection. 39b, the list, indicating that the type specimen of P. trifasciella was examined by Mr. Raymond Uffen.
Flexibility Matters: Assessing the Flexibility Impact of Small and Medium Enterprises on the German Energy Transition: Dataset for Reference Scenario
<p>This repo contains the dataset for reference scenario for the paper</p> <p><strong><em>Flexibility Matters: Assessing the Flexibility Impact of Small and Medium Enterprises on the German Energy Transition</em></strong></p> <p>More information can be found here: https://github.com/AnasAbuzayed/SME_Flexibility</p> <p> </p>
Reference Dataset for QfO Benchmark Webservice
<p>This dataset contains the reference data used for the QfO benchmark webservice workflow (https://github.com/qfo/benchmark-webservice). It is build from the QfO reference proteomes provided by UniProt. The dataset is specific to the release of the reference proteome. The version of this dataset reflects the version of the QfO Reference Proteome dataset.</p>
Dataset - No Reference Image Quality assessment Scores for Humanities Online Repositories
<p>The dataset contains data on No-Reference Image Quality Assessment (NR-IQA) scores for online repositories in the humanities.</p>
ccRCC reference datasets to benchmark UnitedMet
Open the record for dataset details and reuse information.
Survival of the self: Examinations of the role of self-reference in adaptive memory - DATASET
<p>Free recall data for</p> <p>Survival of the self: </p> <p>Examinations of the role of self-reference in adaptive memory</p>
Dataset of Middle Indic Past-Referring Verbs
<p>Dataset containing 401 past-referring verb forms extracted from four texts in two Middle Indic languages, Pāli and Jaina-Māhārāṣṭrī.</p>
Lipid-laden macrophage reference dataset (Kloosterman et al., STAR Protocols 2024)
<p>This is a reference single cell RNA sequencing dataset containing lipid-laden macrophages (LLMs) from a murine glioblastoma and HCC model (Kloosterman and Erbani et al., Cell 2024 and Ramirez, Taranto and Ando-Kuri et al., Nature Communications 2024).</p> <p>This dataset is used for comparing metabolic activity of LLMs in newly generated single cell RNA sequencing dataset to uncover the potential source of lipids for macrophages in other types of cancer. The code to integrate and analyse this dataset can be found in Kloosterman et al., STAR Protocols 2024. </p>
Reference sheet for the dataset: TechOceanS ALR B7600021 BDOC Deployment 641
<p>This reference sheet directs to the British Oceanographic Data Centre's Deployment Catalogue repository, where the full metadata for deployment 641 is available. This reference sheet and the repository both provide contact details for acquiring the raw data.</p>
Target References dataset (TargetCall)
<p>Detailed description:</p> <p>Reference genomes used for the TargetCall as the target reference. All taken from NCBI RefSeq.</p>
Experimental dataset referring to: 'Transient Freezing of Water in a Square Duct: An Experimental Benchmark"
<p>This data set corresponds to the paper This data set corresponds to the paper Transient Freezing of Water in a Square Duct: An Experimental Benchmark. Please cite this paper when using this data (for instance for validating numerical melting/solidification models)</p> <p>The following flow conditions are included (for both the inlet and the center of the channel):</p> <p>Re = 474, T_c,set = -5<br> Re = 474, T_c,set = -7.5<br> Re = 474, T_c,set = -10<br> Re = 474, T_c,set = -15<br> Re = 1118, T_c,set = -5<br> Re = 1118, T_c,set = -7.5<br> Re = 1118, T_c,set = -10<br> Re = 1118, T_c,set = -15</p> <p>Each folder includes the original PIV images, the PIV images after rotation correction, scaling and AOI selection, the post processed velocity data, the post processed ice-layer and the temperature recordings of the cold-plate as well as the inlet, outlet temperatures and the flow rate (TData). The header for the recordings is included in the main dataset which may be used to navigate the columns and select the relevant data.</p> <p>Finally, there is one folder containing the flow measurements without the ice-growth, such that the flowfield in the channel may be compared to the expected flow field from literature for laminar flow in a square duct.</p>
Datasets: Characterization of the PTB ultra-high pulse dose rate reference electron beam
<p>Open access datasets for:</p> <p>Characterization of the PTB ultra-high pulse dose rate reference electron beam</p> <p>doi: 10.1088/1361-6560/ac5de8</p>
Pre-built Symphonypy reference objects that can be downloaded and used to map new query datasets
<p>Pre-built Symphonypy reference objects that can be downloaded and used to map new query datasets. The same data as in <a href="https://zenodo.org/record/5090425#.Y9EmLC8w3tg">https://zenodo.org/record/5090425</a>, but for Python port for Symphony.</p> <p>The Symphony algorithm is used to perform reference mapping to these atlases. </p> <ul> <li>Paper: <a href="https://www.nature.com/articles/s41467-021-25957-x">https://www.nature.com/articles/s41467-021-25957-x</a></li> <li>Usage: <a href="https://github.com/potulabe/symphonypy">https://github.com/potulabe/symphonypy</a></li> </ul> <p><strong>References available for download:</strong></p> <ol> <li>10x PBMCs Atlas (pbmcs_10x_reference.h5ad)</li> <li>Pancreatic Islet Cells Atlas (pancreas_plate-based_reference.h5ad)</li> <li>Fetal Liver Hematopoiesis Atlas (fetal_liver_reference_3p.h5ad)</li> <li>Healthy Fetal Kidney Atlas (kidney_healthy_fetal_reference.h5ad)</li> <li>T cell CITE-seq atlas (tbru_ref.h5ad)</li> <li>Cross-tissue Inflammatory Immune Atlas (zhang_reference.h5ad)</li> <li>Tabula Muris Senis (FACS) Atlas (TMS_facs_reference.h5ad)</li> </ol>
InSAR-derived horizontal velocities in a global reference frame - final output dataset and software codes
<p>The output dataset as described in the article in title, extracted from COMET LiCSAR dataset in March 2021.</p> <p>We also provide a snapshot of the python3 codes used to generate the output dataset.</p> <p>Contents and description of the dataset:</p> <p>uaz_values.csv<br> ==============<br> Contains u_az values and other relevant data in columns:<br> frame - ID of related frame (same as in frame_values.csv)<br> esd_master - reference acquisition epoch<br> epoch - date of acquisition epoch<br> daz_total_wrt_orbits - original extracted azimuth shift w.r.t. orbits<br> daz_cc_wrt_orbits - original extracted azimuth shift w.r.t. orbits from intensity cross-correlation (prior to spectral diversity)<br> drg_wrt_orbits - original extracted range shift w.r.t. orbits<br> orbits_precision - precision of applied orbits (P..precise, R..restituted)<br> version - orbits version<br> daz_iono_grad_mm - u_az from ionosphere propagation<br> tecs_A - estimated TECs at centre of hyphotetical burst A<br> tecs_A - estimated TECs at centre of hyphotetical burst B<br> daz_mm_notide - u_az after correction of solid-earth tides<br> daz_mm_notide_noiono_grad - u_az after correction of solid-earth tides and ionospheric gradient propagation<br> is_outlier_* - flag of outlier datapoint, as identified through Huber loss function (related to velocity estimates in frame_values.csv)</p> <p>frame_values.csv<br> ================<br> Contains along-track velocity estimates and other relevant data in columns:<br> frame - ID of related frame<br> master - reference acquisition epoch<br> center_lon - longitude coordinate of the frame centre<br> center_lat - latitude coordinate of the frame centre<br> heading - satellite heading angle (from the geograpic north)<br> azimuth_resolution - extracted azimuth pixel spacing (in metres)<br> range_resolution - extracted range pixel spacing (in metres)<br> avg_incidence_angle - average incidence angle of the frame<br> centre_range_m - approximate slant distance between the satellite and centre of the frame<br> centre_time - acquisition time (UTC) of centre of the frame at the reference epoch (appliable to other epochs)<br> s1AorB - flag of S-1A or B of the reference epoch<br> slope_plates_vel_azi_itrf2014 - along-track velocity estimated from ITRF2014 plate motion model<br> slope_daz_mm_mmyear - estimated along-track velocity from the original u_az values (in mm/year)<br> slope_daz_mm_notide_mmyear - estimated along-track velocity from u_az values after correction on solid-earth tides<br> slope_daz_mm_notide_noiono_grad_mmyear - estimated along-track velocity from u_az values after correction on solid-earth tides and ionosphere<br> intercept_* - corresponding intercept (in mm)<br> *_RMSE_selection - RMSE of outlier-free u_az data samples<br> *_count_selection - count of outlier-free u_az data samples used to estimate corresponding velocity<br> *_RMSE_mmy_full - RMSE from all u_az data samples applying corresponding velocity and intercept (in mm/year)</p> <p><br> decomposed_grid.csv<br> ===================<br> Contains decomposed velocities (in 250x250 km spacing grid) and other relevant data in columns:<br> count - count of frames used for the decomposition<br> opass - orbital pass codes of the input frames (D..descending, A..ascending)<br> centroid_lon - longitude coordinate of the grid cell centre<br> centroid_lat - latitude coordinate of the grid cell centre<br> VEL_N_noTI - northward velocity component from data corrected for solid-earth tides and ionosphere<br> VEL_E_noTI - eastward velocity component from data corrected for solid-earth tides and ionosphere<br> VEL_N_noT - northward velocity component from data corrected for solid-earth tides<br> VEL_E_noT - eastward velocity component from data corrected for solid-earth tides<br> ITRF_N - northward velocity component from averaged ITRF2014 plate motion model<br> ITRF_E - eastward velocity component from averaged ITRF2014 plate motion model<br> *RMSE_* - RMSE of corresponding data</p>
Dataset for Global Reference Seismological Data Sets: Multimode Surface Wave Dispersion
<ul> <li><strong>How fast do surface waves travel globally after any earthquake?</strong></li> <li><strong>Do we get the same information from various measurement techniques?</strong></li> <li><strong>Which features in the Earth are robust and can be resolved by a reference model?</strong></li> </ul> <p>Reference data with uncertainties are useful for improving existing measurement techniques, validating models of interior structure, calculating teleseismic data corrections in local or multiscale investigations and developing a 3-D reference Earth model. This study was done in collaboration with 18 scientists from 16 institutions in 7 countries who actively participated in the <a href="http://rem3d.org">REM3D</a> project. The project assimilated, archived, reconciled and modeled big (>200 million measurements) and diverse <a href="https://globalseismology.princeton.edu/data/surface-waves">surface-wave datasets</a> for global subsurface structure.</p> <p>The reference data set summarizes measurements of dispersion of fundamental-mode surface waves and up to six overtone branches from 44,871 earthquakes recorded on 12,222 globally distributed seismographic stations. Dispersion curves are specified at a set of reference periods between 25 and 250 s to determine propagation-phase anomalies with respect to a reference Earth model. Empirically determined observational uncertainties (1 sigma) for each wave type, branch number and period can be found in Table 3. </p> <p><strong>Summary:</strong></p> <p><strong>[I]</strong> <strong>Reconciled large and diverse catalogues</strong> of Love-wave (49.65 million) and Rayleigh-wave dispersion (177.66 million) from eight groups worldwide.<br> <strong>[II]</strong> Retrieved missing station and earthquake <strong>metadata</strong> in several legacy compilations and codified <strong>scalable formats</strong> to facilitate reproducibility, easy storage and fast I/O on HPC systems.<br> <strong>[III]</strong> <strong>Systematic discrepancies </strong>between raw phase anomalies can be attributed to discrepant theoretical approximations, reference Earth models and processing schemes.<br> <strong>[IV]</strong> <strong>Phase-velocity variations</strong> yielded by the inversion of the summary data set are <strong>highly correlated</strong> (R ≥ 0.8) with those from the quality-controlled contributing data sets, especially for long-wavelength variations (up to degree ∼25) in fundamental-mode dispersion (50–100 s).<br> <strong>[IV]</strong> <strong>Only 2ζ azimuthal variations</strong> in phase velocity of <strong>fundamental-mode Rayleigh waves</strong> are <strong>required</strong>; maps of 2ζ azimuthal variations are highly consistent between catalogues ( R = 0.6–0.8).</p> <p><strong>Feedback/Questions?</strong> Please contact Raj Moulik (<a href="https://rajmoulik.com">rajmoulik.com</a>) at <a href="mailto:moulik@caa.columbia.edu?subject=Query%20from%20Zenodo">moulik@caa.columbia.edu</a> </p> <p><strong>Reference:</strong></p> <p><em>Please cite the following work if you use this data or software.</em></p> <ul> <li>Moulik, P. <em>et al., </em>(2022) Global reference seismological data sets: multimode surface wave dispersion. <em>Geophys J Int</em> <strong>228</strong>, 1808–1849, doi: <a href="https://doi.org/10.1093/gji/ggab418">10.1093/gji/ggab418</a>. <em><a href="https://rajmoulik.com/Publications/Moulik_Reference_Surface_Waves_GJI2022.pdf">pdf</a></em></li> </ul> <p><em>You can also cite the dataset and software from this Zenodo page (Optional).</em></p> <ul> <li> <p>Moulik, P. (2022) Dataset for Global Reference Seismological Data Sets: Multimode Surface Wave Dispersion. In Geophys. J. Int. (v1.0, Vol. 228, pp. 1808–1849). Zenodo. doi: <a href="https://doi.org/10.5281/zenodo.8371228">10.5281/zenodo.8371228</a></p> </li> </ul> <p><strong>HDF5 Container Format</strong></p> <ul> <li><strong>Reference Love waves </strong>(<a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.SW.Love.data.h5">Download All Periods and Branches as Summary.SW.Love.data.h5</a>)</li> <li><strong>Reference Rayleigh waves </strong>(<a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.SW.Rayl.data.h5">Download All Periods and Branches as Summary.SW.Rayl.data.h5</a>)</li> </ul> <p>Summary (reference) data between pairs of 2562 evenly-spaced knot points with an average spacing of 4.33◦. These files store the data in the RSDF HDF5 container format. These can be read using standard HDF5 modules (e.g. h5py) or using <a href="http://avni.globalseismology.org/">AVNI</a>. For example, to read the reference data for fundamental mode R1 waves at 100s into a Pandas Dataframe containing data (df['data']) and a dictionary with the metadata (df['metadata']), and thereafter write contents to an ASCII text file, enter the following in Python:</p> <ul> <li><em>from avni.data.SW import readSWhdf5,writeSWascii</em></li> <li><em>df=readSWhdf5(query='0/100.0/R1/REM3D',hdffile='Summary.SW.Rayl.data.h5',datatype='summary')</em></li> <li><em>writeSWascii(df,'test.txt')</em></li> </ul> <p><strong>ASCII (text) Format</strong></p> <p>These files contain the same reference data as the HDF5 files above but in gzipped ASCII files. The files are named according to the overtone branch, wave type and period as <em>Summary.$overtone.$wave.$period.REM3D.gz</em> Table A1 from the paper describes the various columns in the surface-wave RSDF ASCII format files.</p> <ul> <li><strong>Love waves </strong>(<a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.SW.Love.data.zip">Download All Periods and Branches as Summary.SW.Love.data.zip</a>) <ul> <li>Fundamental Modes <ul> <li>Minor Arc Arrivals (L1) at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.25s.REM3D.gz">25s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.27s.REM3D.gz">27s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.30s.REM3D.gz">30s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.32s.REM3D.gz">32s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.35s.REM3D.gz">35s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.60s.REM3D.gz">60s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.75s.REM3D.gz">75s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.100s.REM3D.gz">100s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.125s.REM3D.gz">125s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L1.250s.REM3D.gz">250s</a></li> <li>Major Arc Arrivals (L2) at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L2.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L2.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L2.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L2.250s.REM3D.gz">250s</a></li> <li>Higher Obit Arrivals - L3 at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L3.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L3.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L3.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L3.250s.REM3D.gz">250s</a>; L4 at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L4.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L4.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L4.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L4.250s.REM3D.gz">250s</a>; L5 at at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L5.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L5.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L5.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.L5.250s.REM3D.gz">250s</a>.</li> </ul> </li> <li>I<sup>st</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.60s.REM3D.gz">60s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.75s.REM3D.gz">75s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.100s.REM3D.gz">100s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.125s.REM3D.gz">125s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.175s.REM3D.gz">175s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.L1.200s.REM3D.gz">200s</a></li> <li>II<sup>nd</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.60s.REM3D.gz">60s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.75s.REM3D.gz">75s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.100s.REM3D.gz">100s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.125s.REM3D.gz">125s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.L1.150s.REM3D.gz">150s</a></li> <li>III<sup>rd</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.L1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.L1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.L1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.L1.60s.REM3D.gz">60s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.L1.75s.REM3D.gz">75s</a></li> <li>IV<sup>th</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.L1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.L1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.L1.50s.REM3D.gz">50s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.L1.60s.REM3D.gz">60s</a></li> <li>V<sup>th</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.5.L1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.5.L1.45s.REM3D.gz">45s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.5.L1.50s.REM3D.gz">50s</a></li> </ul> </li> <li><strong>Rayleigh waves </strong>(<a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.SW.Rayl.data.zip">Download All Periods and Branches as Summary.SW.Rayl.data.zip</a>) <ul> <li>Fundamental Modes <ul> <li>Minor Arc Arrivals (R1) at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.25s.REM3D.gz">25s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.27s.REM3D.gz">27s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.30s.REM3D.gz">30s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.32s.REM3D.gz">32s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.35s.REM3D.gz">35s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.60s.REM3D.gz">60s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.75s.REM3D.gz">75s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.100s.REM3D.gz">100s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.125s.REM3D.gz">125s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R1.250s.REM3D.gz">250s</a></li> <li>Major Arc Arrivals (R2) at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R2.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R2.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R2.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R2.250s.REM3D.gz">250s</a></li> <li>Higher Obit Arrivals - R3 at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R3.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R3.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R3.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R3.250s.REM3D.gz">250s</a>; R4 at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R4.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R4.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R4.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R4.250s.REM3D.gz">250s</a>; R5 at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R5.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R5.175s.REM3D.gz">175s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R5.200s.REM3D.gz">200s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.0.R5.250s.REM3D.gz">250s</a>.</li> </ul> </li> <li>I<sup>st</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.60s.REM3D.gz">60s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.75s.REM3D.gz">75s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.100s.REM3D.gz">100s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.125s.REM3D.gz">125s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.150s.REM3D.gz">150s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.175s.REM3D.gz">175s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.1.R1.200s.REM3D.gz">200s</a></li> <li>II<sup>nd</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.60s.REM3D.gz">60s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.75s.REM3D.gz">75s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.100s.REM3D.gz">100s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.125s.REM3D.gz">125s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.2.R1.150s.REM3D.gz">150s</a></li> <li>III<sup>rd</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.R1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.R1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.R1.50s.REM3D.gz">50s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.R1.60s.REM3D.gz">60s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.3.R1.75s.REM3D.gz">75s</a></li> <li>IV<sup>th</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.R1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.R1.45s.REM3D.gz">45s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.R1.50s.REM3D.gz">50s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.4.R1.60s.REM3D.gz">60s</a></li> <li>V<sup>th</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.5.R1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.5.R1.45s.REM3D.gz">45s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.5.R1.50s.REM3D.gz">50s</a></li> <li>VI<sup>th</sup> Overtone at <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.6.R1.40s.REM3D.gz">40s</a>, <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.6.R1.45s.REM3D.gz">45s</a>, and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Summary.6.R1.50s.REM3D.gz">50s</a></li> </ul> </li> </ul> <p><strong>Other Data Products:</strong></p> <ul> </ul> <ul> <li><strong>ReferenceSW_Moulik2022_Figures(<a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/ReferenceSW_Moulik2022_Figures.zip">.zip</a> or <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/ReferenceSW_Moulik2022_Figures.pdf">.pdf</a>)</strong> - contains all figures from the paper in .png format</li> <li><a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Scatter_Plots.zip"><strong>Scatter_Plots.zip</strong></a> - contains scatter plots similar to Figure 5 in the paper, which compares measurements between two sets of techniques. The files with the suffix *raw.png are comparisons for original raw datasets, while those with the suffix *.clean.png are comparisons after the entire workflow is completed to create the clean datasets (e.g. Figure 13, bottom row).</li> <li><a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Half_cycle.zip"><strong>Half_cycle.zip</strong></a> and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Cycle_skips.zip"><strong>Cycle_skips.zip</strong></a> - contains list of source-station paths where discrepancies were found between pairs of techniques. Half (±0.9–1.1 · π ) or full-cycle discrepancies (±0.9–1.1 · 2π ) identified in Section 4.5 are used during outlier analysis (Section 5.3) to create the clean summary dataset. Half- and full-cycle discrepancies identified in these files indicate potential polarity reversals and cycle skips respectively. Note that all of these discrepancies have not been checked for specific causes manually. </li> <li><a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/vflip-table.REM3D"><strong>vflip-table.REM3D</strong></a> - an ASCII file containing station names and start/end times where polarity reversal issues have been confirmed through manual analysis. This is in contrast to the automated half-cycle discrepancies identified in <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Half_cycle.zip"><strong>Half_cycle.zip</strong></a> above.</li> <li><a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/M1442"><strong>M1442</strong></a> and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/B2562"><strong>B2562</strong></a> - Files containing the knot locations of evenly-spaced points on the surface. B2562 has an average knot spacing of 4.33◦ and is used as the underlying grid for the homogenization process to get summary data (Section 5.1). In order to obtain 2-D variations in local phase slowness or velocity, we use 1442 splines with an average knot spacing of 5.77◦ (Section 6.1)</li> <li><a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Cleanhomo.SW.Love.data.h5"><strong>Cleanhomo.SW.Love.data.h5</strong></a> and <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Cleanhomo.SW.Rayl.data.h5"><strong>Cleanhomo.SW.Rayl.data.h5</strong></a> - Clean homogenized data for each research group obtained at the end of our workflow (Figure 2). The ASCII files containing the same data are provided in <a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Cleanhomo.SW.Love.data.zip"><strong>Cleanhomo.SW.Love.data.zip</strong></a> and <strong><a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Cleanhomo.SW.Rayl.data.zip">Cleanhomo.SW.Rayl.data.zip</a>. </strong>The summary dataset listed earlier represents the reconciled measurements, and should be preferred over those from individual groups in most applications.</li> <li><a href="https://zenodo.org/api/files/e41385bf-fc0d-46ff-ac4b-4fb101467c6c/Inversion_Example.zip"><strong>Inversion_Example.zip</strong></a> - Contains an example of a 2D slowness map inversion with 2ζ azimuthal variations using the reference summary dataset at 100s for fundamental-mode minor-arc Rayleigh waves (R1). Also provided are plots for anistropic variation (<em>Anisotropy_Plots</em>), spline coeffients of 1442 evenly-spaced spherical splines (<em>Spline_Coefficients</em>), and corresponding values at every 1X1 degree pixel in extended pixel format (<em>Maps_epix</em>). The aim of this study is to provide dispersion measurements of surface-wave arrivals, not to provide detailed 2D phase velocity/slowness models. </li> </ul> <p><strong>Note about Data Format</strong></p> <p>The underlying philosophy and format of data files are discussed in the <a href="https://globalseismology.princeton.edu/rsdf">reference seismic data format (RSDF) project</a>. Table A1 from the GJI paper describes the various columns in the surface-wave RSDF format files above.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.