Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Single-Cell and Spatial Transcriptomics Analysis of Steatotic Donor Liver Susceptibility to Post-Transplant Injury
ClinicalTrials.gov study NCT07362745. IPD Sharing: NO. Countries: 1. Publications: 0.
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics [10X_scRNAseq]
GEO Series GSE141589. Drosophila melanogaster. 1 samples. Type: Expression profiling by high throughput sequencing.
Spatial Transcriptomic Landscape of Invasion Patterns in Human Papillomavirus-Associated Endocervical Adenocarcinoma
GEO Series GSE316098. Homo sapiens. 186 samples. Type: Expression profiling by high throughput sequencing.
scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice
GEO Series GSE216542. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Spatial Transcriptomics of Controlled vs Uncontrolled Tuberculosis in a Mouse Model
GEO Series GSE292392. Mus musculus. 16 samples. Type: Other.
Spatial localization with Spatial Transcriptomics for an atlas of healthy and injured cell states and niches in the human kidney [Visium ST]
GEO Series GSE183456. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing.
Distinct mesenchymal cell states mediate prostate cancer progression [Spatial Transcriptomics]
GEO Series GSE248466. Mus musculus. 2 samples. Type: Other.
Spatial Transcriptomics and Single-Cell RNA-Sequencing Revealed Dendritic Cell-Mediated Inflammation in Keratoconus
GEO Series GSE285060. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
A spatial and projection-based transcriptomic atlas of paraventricular hypothalamic cell types (DroNc-Seq)
GEO Series GSE303082. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics of vulvar lichen sclerosus reveal multi-compartmental alterations in gene expression and signaling cross-talk
GEO Series GSE274068. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Visium Spatial Transcriptomics expression profiles from IPMN samples of the pancreas
GEO Series GSE233293. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies NKX6-2 Expression as a Driver of Gastric Differentiation and Indolent Biological Potential
GEO Series GSE233254. Homo sapiens; Mus musculus. 33 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptome data of Longissimus dorsi muscle from 3 pigs
GEO Series GSE203094. Sus scrofa. 3 samples. Type: Expression profiling by high throughput sequencing.
High-resolution spatial transcriptomics and cell lineage analysis reveal spatiotemporal cell fate determination during craniofacial development
GEO Series GSE293181. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic mapping of the mouse brain in chronic stress
GEO Series GSE263450. Mus musculus. 6 samples. Type: Other.
Transcriptomic and proteomic spatial profiling of tertiary lymphoid aggregates in head and neck cancer reveal spatial tissue dynamics and profiles associated with immunotherapy response.
GEO Series GSE259279. Homo sapiens. 9 samples. Type: Other.
Precision targeting of beta-catenin induces tumor reprogramming and immunity in hepatocellular cancers [Spatial Transcriptomics by 10X Visium CTNNB1/NFE2L2]
GEO Series GSE290445. Mus musculus. 5 samples. Type: Other.
Spatiotemporal transcriptomic map of glial cell response in a mouse model of acute brain ischemia [spatial transcriptomics]
GEO Series GSE233814. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing; Other.
Repurposing Large-Format Microarrays for Scalable Spatial Transcriptomics - Bulk RNA-seq
GEO Series GSE266246. Mus musculus. 180 samples. Type: Expression profiling by high throughput sequencing.
Spatial epigenome-transcriptome co-profiling of mammalian tissues [Human RNA-Seq]
GEO Series GSE205181. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.