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2,107 results for “Spectrum”
Data files for manuscript "Elucidating the clinical and molecular spectrum of SMARCC2-associated NDD in a cohort of 65 affected individuals"
<p># 2023-06-28<br> # Data files for manuscript "Elucidating the clinical and molecular spectrum of SMARCC2-associated NDD in a cohort of 65 affected individuals"<br> # Summary<br> This ZIP-file contains the supplementary files of our SMARCC2 study "Elucidating the clinical and molecular spectrum of SMARCC2-associated NDD in a cohort of 65 affected individuals". <br> Suppl. File S2 contains comprehensive clinical data<br> Suppl. File S3 contains comprehensive genetic data<br> Suppl. File S4 contains files of the SMARCC2 N-terminal homology model</p> <p># Folder structure<br> ./ (parent directory containing this README file and all subfolders)<br> ./Files/ (contains Excel Suppl. File S2 and Suppl.File S3, and ZIP Suppl.File S4)</p> <p># Files and checksums<br> Algorithm Hash Path<br> --------- ---- ----<br> MD5 003A879AA75CF8B5C4E3E05F76C4EB4C SMARCC2-Supplementary\Files\FileS2_cases_clinical-table.xlsx<br> MD5 73B4F9E83419A8404345101CAA4D2205 SMARCC2-Supplementary\Files\FileS3_variants-and-domains.xlsx<br> MD5 B0A12F36B4801EB6C4D21BA02B4270BB SMARCC2-Supplementary\Files\FileS4_SMARCC2 N-terminal homology model.zip</p>
Estimates of the Wavenumber Wavelet Power Spectrum of Magnetic Fluctuations during Magnetic Reconnection Figure Data
<p>This is data for the publication, "Estimates of the Wavenumber Wavelet Power Spectrum of Magnetic Fluctuations during Magnetic Reconnection".</p>
Figure 1 in Description of the bioluminescent emission spectrum of Bicellonycha amoena Gorham, 1880 (Coleoptera: Lampyridae) in Guatemala
Figure 1. Dorsal and ventral view of B. amoena. A–B) Male and female from "Mayan Golf Club", Villa Nueva, Guatemala. C–D) Two males from Hacienda Sac Chich near Merida, Mexico (credit: Lynn Faust).
Figure 4 in Description of the bioluminescent emission spectrum of Bicellonycha amoena Gorham, 1880 (Coleoptera: Lampyridae) in Guatemala
Figure 4. Bioluminescence emission spectrum of B. amoena in comparison to that of some North American Photinus species. A) B. amoena. B) P. tanytoxus. C) P. consanguineus. D) P. consimilis. E) P. sabulosus. F) P. umbratus (Biggley et al. 1967).
Data from: Beyond rhythm - a framework for understanding the frequency spectrum of neural activity
<p>Cognitive and behavioral processes are often accompanied by changes within well-defined frequency bands of the local field potential (LFP i.e., the voltage induced by neuronal activity). These changes are detectable in the frequency domain using the Fourier transform and are often interpreted as neuronal oscillations. However, aside some well-known exceptions, the processes underlying such changes are difficult to track in time, making their oscillatory nature hard to verify. In addition, many non-periodic neural processes can also have spectra that emphasize specific frequencies. Thus, the notion that spectral changes reflect oscillations is likely too restrictive. In this study, we use a simple yet versatile framework to understand the frequency spectra of neural recordings. Using simulations, we derive the Fourier spectra of periodic, quasi-periodic and non-periodic neural processes having diverse waveforms, illustrating how these attributes shape their spectral signatures. We then show how neural processes sum their energy in the local field potential in simulated and real-world recording scenarios. We find that the spectral power of neural processes is essentially determined by two aspects: 1) the distribution of neural events in time and 2) the waveform of the voltage induced by single neural events. Taken together, this work guides the interpretation of the Fourier spectrum of neural recordings and indicates that power increases in specific frequency bands do not necessarily reflect periodic neural activity.</p>
Earth's transit spectrum from Macdonald and Cowan (2019)
<p>Earth's transit spectrum from Macdonald and Cowan (2019), constructed from Atmospheric Chemistry Experiment Fourier Transform Spectrometer (ACE-FTS) solar occultation data (Hughes et al. 2014). The Atmospheric Chemistry Experiment (ACE), also known as SCISAT, is a Canadian-led mission mainly supported by the Canadian Space Agency. The occultation data used are available at http://www.ace.uwaterloo.ca/atlas.php. </p> <p> </p>
Fig. 5. Split support spectrum for the 18S in Reconstruction of Evolutionary History of Pleurostomatid Ciliates (Ciliophora, Litostomatea, Haptoria): Interplay of Morphology and Molecules
Fig. 5. Split support spectrum for the 18S rRNA gene alignment used to construct the phylogenetic network in Fig. 4. Column height represents the number of clade-supporting positions, i.e., putative primary homologies. Column parts above the y-axis represent the in-group partition, while those below the axis correspond to the out-group partition.
The cosmic ray spectrum
<p>The cosmic ray spectrum. Compilation of data on charged cosmic rays, gamma-rays and neutrinos. When using the figure, please cite as follows:</p><blockquote><p>Figure by P. Mertsch, 2023; available at <a href="https://doi.org/10.5281/zenodo.10003566">https://doi.org/10.5281/zenodo.10003566</a> under a CC-BY4.0 license.</p></blockquote>
Study Assessing the Efficacy, Safety and PK of Alpelisib (BYL719) in Pediatric and Adult Patients With PIK3CA-related Overgrowth Spectrum
ClinicalTrials.gov study NCT04589650. IPD Sharing: YES. Countries: 12. Publications: 2.
Data from: Can IR images of the water surface be used to quantify the energy spectrum and the turbulent kinetic energy dissipation rate?
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Data from: The symmetry spectrum in a hybridising, tropical group of rhododendrons
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Data from: Shade tolerance controls the spectrum of crown sizes and its response to local competition across European and North American tree species: Implications for light interception strategies
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Data from: Beyond rhythm - a framework for understanding the frequency spectrum of neural activity
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Expanding the plant economics spectrum with root nitrogen reallocation
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AERPAW helikite spectrum measurements at Lake Wheeler site in May 2022
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Comparative transcriptomics of tropical woody plants supports fast and furious strategy along the leaf economics spectrum in lianas
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AERPAW helikite spectrum monitoring at Packapalooza festival in Aug 2022
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Data files associated with: Evolution of the mutation spectrum across a mammalian phylogeny
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Dynamic spectrum of 2MASSW J1047539+212423 observed by the Karl G. Jansky Very Large Array, as a Numpy save file
<p>These files contains the dynamic spectrum data of the brown dwarf 2MASSW J1047539+212423 as extracted from observations made with the Karl G. Jansky Very Large Array. The observations are described in Allers et al. (2020; forthcoming) and the analysis scripts are made available in the Git repository https://github.com/johannavos/BDwindspeeds .</p>
Index and biological spectrum of accessible DNA elements in the human genome
<p>Data associated with the manuscript titled<br> "Index and biological spectrum of accessible DNA elements in the human genome"<br> <a href="https://doi.org/10.1101/822510">https://doi.org/10.1101/822510</a></p> <p>Code repositories for these data are available here:</p> <ul> <li>https://github.com/Altius/Index</li> <li>https://github.com/Altius/Vocabulary</li> </ul> <p><br> Tab-separated file with DNase I Hypersensitive Site (DHS) coordinates,<br> including DHS summits and core regions and assignments to regulatory components.<br> A separate legend file describes the contents of each column in more detail.</p> <ul> <li>DHS_Index_and_Vocabulary_hg38_WM20190703.txt.gz</li> <li>DHS_Index_and_Vocabulary_hg19_WM20190703.txt.gz (mapped using liftOver, not ideal)</li> <li>DHS_Index_and_Vocabulary_legend.txt</li> </ul> <p> </p> <p>Metadata files describing biosample characteristics and annotations,<br> provided in HTML, PDF, TSV and Excel formats:</p> <ul> <li>DHS_Index_and_Vocabulary_metadata.html</li> <li>DHS_Index_and_Vocabulary_metadata.pdf</li> <li>DHS_Index_and_Vocabulary_metadata.tsv</li> <li>DHS_Index_and_Vocabulary_metadata.xlsx</li> </ul> <p> </p> <p>Presence/absence matrix of DHSs (rows) versus biosamples (columns),<br> provided in RData, MatrixMarket and raw formats:</p> <ul> <li>dat_bin_FDR01_hg38.RData</li> <li>dat_bin_FDR01_hg38.mtx.gz</li> <li>dat_bin_FDR01_hg38.txt.gz</li> <li>dat_bin_FDR01_hg19.RData (mapped using liftOver, not ideal)</li> <li>dat_bin_FDR01_hg19.txt.gz (mapped using liftOver, not ideal)</li> </ul> <p> </p> <p>Normalized DNase-seq signal matrix of DHSs (rows) versus biosamples (columns),<br> provided in RData and raw formats:</p> <ul> <li>dat_FDR01_hg38.RData</li> <li>dat_FDR01_hg38.txt.gz</li> </ul> <p>The order of DHSs (rows) is the same as in the DHS Index file(s) above,<br> and the order of biosamples (columns) is the same as in the metadata files.</p> <p> </p> <p>Non-negative Matrix Factorization (NMF) results, decomposing the presence/absence matrix (hg38) into 16 components:</p> <ul> <li>2018-06-08NC16_NNDSVD_Mixture.npy.gz</li> <li>2018-06-08NC16_NNDSVD_Basis.npy.gz</li> </ul> <p> </p> <p>Putative transcription factor-specific regulatory elements,<br> identified using DHS Vocabulary components, TF motif databases and biosample-specific footprinting data:</p> <ul> <li>TF_associated_DHSs_hg38.tar.gz</li> </ul>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.