Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
4,276
datasets available to search
ShareScore release 0.9.0
Dataset results
4,276 results for “Transcription factors”
Fig 3 in Docosahexaenoic Acid (DHA) Reduces LPSInduced Inflammatory Response Via ATF3 Transcription Factor and Stimulates Src/ Syk Signaling-Dependent Phagocytosis in Microglia
Open the record for dataset details and reuse information.
Fig 4 in Docosahexaenoic Acid (DHA) Reduces LPS-Induced Inflammatory Response Via ATF3 Transcription Factor and Stimulates Src/Syk Signaling-Dependent Phagocytosis in Microglia
Open the record for dataset details and reuse information.
Single cell deletion of the transcription factors Trps1 and Sox9 reveals novel functions in adult cortical astrocytes
Open the record for dataset details and reuse information.
Probing DNA - transcription factor interactions using single-molecule fluorescence detection in nanofluidic devices
<p>Readme.txt, 16.07.2021<br> Fontana et al.<br> “Probing DNA - transcription factor interactions using single-molecule fluorescence detection in nanofluidic devices”</p> <p>pre-print: https://doi.org/10.1101/2021.05.12.443786 (BioRxiv)</p> <p>The repository contains the raw data ("*.tif") files, data from subsequent analysis steps performed in Matlab ("*.mat") and obtained histograms.</p> <p>For further information, please contact<br> dr. Johannes Hohlbein @ Wageningen University & Research<br> (johannes.hohlbein@wur.nl)</p>
The transcription factor PagLBD3 contributes to the regulation of secondary growth in Populus
<p>Lateral organ boundaries domain (LBD) genes encode plant-specific transcription factors that participate in regulating various developmental processes. In this study, we genetically characterized PagLBD3 as an important regulator of secondary growth in Populus. Overexpression of PagLBD3 increased stem secondary growth in Populus with significantly higher rate of cambial cells differentiated into phloem, while dominant repression of PagLBD3 significantly decreased the rate of cambial cells differentiated into phloem. Furthermore, we identified 1756 PagLBD3 genome-wide putative direct target genes (DTGs) through RNA sequencing (RNA-seq) coupled DNA affinity purification followed by sequencing (DAP-seq) assays. Gene Ontology analysis revealed that genes regulated by PagLBD3 were enriched in biological pathways regulating meristem development, xylem development, and auxin transport. Several central regulator genes for vascular development, including phloem intercalated with xylem (PXY), wuschel related homeobox4 (WOX4), Secondary Wall-Associated NAC Domain 1s (SND1-B2) and Vascular-Related NAC-Domain 6s (VND6-B1), were identified as PagLBD3 DTGs. Together, our results suggested that PagLBD3 and its DTGs form a complex transcriptional network to modulate cambium activity and phloem/xylem differentiation.</p>
Data_Tab1_Deletion of the transcription factor Prox-1 specifically in the renal distal convoluted tubule causes hypomagnesemia via reduced expression of TRPM6 and NCC
<p>Data of Tab1 from “Deletion of the transcription factor Prox-1 specifically in the renal distal convoluted tubule causes hypomagnesemia via reduced expression of TRPM6 and NCC”</p> <p>Dataset (doi: 10.1007/s00424-020-02491-1) contains the original publication as PDF-format (10.1007_s00424-020-02491-1.pdf). Corresponding raw data obtained from LC-MS/MS analysis provided as one file in CSV format (31003A-179400_10.1007_s00424-020-02491-1_DW_4-1.csv). All further experiment related information provided as two meta-data-files (31003A-179400_10.1007_s00424-020-02491-1_DW _4-1_M_1.PDF, 31003A-179400_10.1007_s00424-020-02491-1_DW _4-1_M_2.pdf) as PDF format.</p>
Predictive model of transcriptional elongation control identifies trans regulatory factors from chromatin signatures
<p>Supplementary data for "Predictive model of transcriptional elongation control identifies trans regulatory factors from chromatin signatures" by Toray S. Akcan, Matthias Heinig.</p>
DNA-guided transcription factor cooperativity shapes face and limb mesenchyme
<p>Code and processed data for "DNA-guided transcription factor cooperativity shapes face and limb mesenchyme," Kim et al, Cell 2024.</p>
Stepwise modifications of transcriptional hubs link pioneer factor activity to a burst of transcription
<p>This dataset includes the raw imaging data and custom codes related to the publication: Stepwise modifications of transcriptional hubs link pioneer factor activity to a burst of transcription, Nat. Commun., 2023.</p>
Detection of High Expression Levels of EMT-Transcription Factor mRNAs in Patients With Pancreatic Cancer and Their Diagnostic Potential
ClinicalTrials.gov study NCT04323917. IPD Sharing: NO. Countries: 1. Publications: 1.
Data from: Adaptive evolution and divergent expression of heat stress transcription factors in grasses
Open the record for dataset details and reuse information.
Predicting genome-wide tissue-specific enhancers via combinatorial transcription factor genomic occupancy analysis
Open the record for dataset details and reuse information.
The transcription factor PagLBD3 contributes to the regulation of secondary growth in Populus
Open the record for dataset details and reuse information.
Data from: Discovery and information-theoretic characterization of transcription factor binding sites that act cooperatively
Open the record for dataset details and reuse information.
Data from: Limits on information transduction through amplitude and frequency regulation of transcription factor activity
Open the record for dataset details and reuse information.
A basic helix-loop-helix/Per-Arnt-Sim transcription factor Taiman is essential for metamorphosis in <em>Henosepilachna vigintioctomaculata</em>
Open the record for dataset details and reuse information.
Data from: Identification of transcription factor genes involved in anthocyanin biosynthesis in carrot (Daucus carota L.) using RNA-Seq
Open the record for dataset details and reuse information.
Epistasis facilitates functional evolution in an ancient transcription factor
Open the record for dataset details and reuse information.
The underground life of homeodomain-leucine zipper transcription factors
Open the record for dataset details and reuse information.
Data from: A gene for genetic background in Zea mays: fine-mapping enhancer of teosinte branched1.2 to a YABBY class transcription factor
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.