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231 results for “codon”

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geo24/100

Codon Pair-Specific Translation Defects Induce Ribosome-Associated Quality Control to Avoid Proteotoxic Stress [RNA-seq]

GEO Series GSE245672. Saccharomyces cerevisiae. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

Modeling ribosome dwell times and relationship with tRNA loading and codon usage in mammals (Ribosome Profiling)

GEO Series GSE126383. Mus musculus. 11 samples. Type: Other.

openGEO-OpenMar 2020View details →
geo24/100

Mammalian queuosine tRNA modification impacts codon usage preferences to enhance cell proliferation and MHC-II expression [HEK293T_0v100Q_mRNA-seq]

GEO Series GSE284149. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo24/100

Codon usage and 3′ UTR length determine maternal mRNA stability in zebrafish

GEO Series GSE71609. Danio rerio. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →
geo24/100

Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3' UTRs and Near Stop Codons

GEO Series GSE29714. Homo sapiens; Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.

openGEO-OpenMay 2012View details →
geo24/100

Mutability and hypermutation antagonize immunoglobulin codon optimality; Analysis of human MLN B cells.

GEO Series GSE260944. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenOct 2024View details →
geo24/100

Stop Codon Context Influences Genome-Wide Stimulation of Termination Codon Readthrough by Aminoglycosides

GEO Series GSE138643. Homo sapiens. 41 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2020View details →
geo24/100

Ribosomal frameshifting at normal codon repeats recodes functional chimeric proteins in human[ChIP-seq]

GEO Series GSE220676. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo24/100

Codon usage and protein length-dependent feedback from translation elongation to translation initiation and kinetics

GEO Series GSE168595. Neurospora crassa. 33 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2021View details →
geo24/100

A snoRNA–tRNA modification network governs codon-biased cellular states

GEO Series GSE234689. Mus musculus; Homo sapiens. 69 samples. Type: Other; Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo24/100

Human SAMD9 is a Virus-Activatable Anticodon Nuclease Inhibiting Codon-Specific Protein Synthesis

GEO Series GSE230043. Homo sapiens. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →
geo24/100

Queuosine-tRNA promotes sex-dependent learning and memory formation by maintaining codon-biased translation elongation speed.

GEO Series GSE180766. Mus musculus. 20 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →
geo24/100

mRNA sequence analysis of zebrafish embryos injected with the codon tag reporter library

GEO Series GSE173179. Danio rerio. 12 samples. Type: Other.

openGEO-OpenDec 2021View details →
geo24/100

Oligodendrocyte differentiation alters tRNA modifications and codon-dependent mRNA decay [QuantMseq]

GEO Series GSE182808. Mus musculus. 7 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

Identification of transcripts harboring premature termination codons by NMD inhibition in a panel of CCRCC cell lines

GEO Series GSE20491. Homo sapiens. 99 samples. Type: Expression profiling by array.

openGEO-OpenFeb 2010View details →
geo24/100

Stop Codon Context Influences Genome-Wide Stimulation of Termination Codon Readthrough by Aminoglycosides [Dataset 2]

GEO Series GSE138639. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2020View details →
geo24/100

Synonymous mitochondrial DNA variation impairs CD8 T cell fate via codon affinity [TCR scRNA]

GEO Series GSE216904. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenOct 2024View details →
geo24/100

Suppression of ribosomal pausing by eIF5A is necessary to maintain the fidelity of start codon selection (CRISPR screen)

GEO Series GSE132009. Homo sapiens. 16 samples. Type: Other.

openGEO-OpenDec 2019View details →
geo24/100

The Ccr4-Not complex monitors the translating ribosome for codon optimality

GEO Series GSE131408. Saccharomyces cerevisiae. 4 samples. Type: Other.

openGEO-OpenApr 2020View details →
geo24/100

Human SAMD9 is a Poxvirus-Activatable Anticodon Nuclease Inhibiting Codon-Specific Protein Synthesis

GEO Series GSE229979. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record