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568 results for “condensate”
Universal dynamics of a pair condensate
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Environment and genotype influence on Populus tremuloides condensed tannin composition
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Data from: Hierarchical interactions between nucleolar and heterochromatin condensates are mediated by a dual-affinity protein
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Rapid growth of new atmospheric particles by nitric acid and ammonia condensation: data resources
<p>Data presented in the manuscript "Rapid growth of new atmospheric particles by nitric acid and ammonia condensation" currently in review.</p> <p> </p> <p>The manuscript associated with this data was written using results from the CLOUD experiment at CERN, and the author list is a subset of the CLOUD collaboration.</p> <p> </p>
MicroED datasets from proteinase K nanocrystals using a 20 micrometre C2 condenser aperture
<p>Eight diffraction data sets were used to determine the proteinase K structure from nanocrystals by electron diffraction, as deposited in the PDB with id <a href="http://doi.org/10.2210/pdb6ZET/pdb">6ZET</a> and published in <a href="https://doi.org/10.3389/fmolb.2020.00179">https://doi.org/10.3389/fmolb.2020.00179</a></p> <p>A script is provided that allows indexing of the diffraction spots using DIALS 3.1. This is adapted from the commands used to process the data for the publication, which used DIALS 1.10.</p>
MicroED datasets from a proteinase K lamella using a 50 micrometre C2 condenser aperture
<p>These are the two diffraction data sets used to determine the proteinase K structure from a crystalline lamella by electron diffraction, as deposited in the PDB with id <a href="http://doi.org/10.2210/pdb6ZEU/pdb">6ZEU</a> and published in <a href="https://doi.org/10.3389/fmolb.2020.00179">https://doi.org/10.3389/fmolb.2020.00179</a></p> <p>A script is provided that allows indexing of the diffraction spots using DIALS 3.1. This is adapted from the commands used to process the data for the publication, which used DIALS 1.10.</p>
Emergence of Compact Oligomers inside the Small-World Network of TDP-43 Condensates
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Data for M. Kędziora, et al. "Predesigned perovskite crystal waveguides for room temperature exciton-polariton condensation and edge-lasing". Nature Materials.
<p>The repository contains data to generate figures from "Predesigned perovskite crystal waveguides for room temperature exciton-polariton condensation and edge-lasing", Nature Materials (2024).</p> <p>This work was supported by the National Science Center, Poland, under projects 2022/47/B/ST3/02411 (B.P., M. Kędziora and K.T.), 2021/43/B/ST3/00752 (M.M.) and 2019/35/N/ST3/01379 (A.O.), and financed by the European Union EIC Pathfinder Open project ‘Polariton Neuromorphic Accelerator’ (PolArt, ID: 101130304) (B.P., D.S., J.S. and M.M.). H.S. acknowledges project no. 2022/45/P/ST3/00467 co-funded by the Polish National Science Centre and the European Union Framework Programme for Research and Innovation Horizon 2020 under the Marie Skłodowska-Curie grant agreement no. 945339. A.O. acknowledges support from the Foundation for Polish Science (FNP). This work was supported by the joint bilateral project ‘Novel photonic platform for neuromorphic computing’ Italy MAECI–Poland NAWA PPN/BIT/2021/1/ 00124/U/00001 (K.Ł.-M., B.P., R.M., L.D.M. and D.S.). M.E., A.S. and K.B. acknowledge support from the statutory funds of the Łukasiewicz Research Network–Institute of Microelectronics and Photonics. This work had been completed while K.B. was a Doctoral Candidate in the Interdisciplinary Doctoral School at the Łódź University of Technology, Poland.</p>
Two- and one-photon absorption spectra of aqueous thiocyanate anion highlight the role of symmetry in the condensed phase
<p>The snapshots.zip contains the snapshots extracted from QM/MM AIMD simulations used in 2PA calculations</p><p>The 2pa_inp_out.zip contains the 2PA calculation input and output files for each of the snapshots. </p>
Case60nordic_Condenser
<p>Case60nordic Condenser Dataset</p> <p>Used in our paper "Topology-aware reinforcement learning for tertiary voltage control", submitted at PSCC 2024.</p>
Lattice Polaron in a Bose-Einstein Condensate of Hard-Core Bosons
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Datasets associated with the manuscript Protein Condensate Atlas from predictive models of heteromolecular condensate composition
<p>Datasets associated with the manuscript "Protein Condensate Atlas from predictive models of heteromolecular condensate composition".</p>
Data for the paper "Microcanonical and canonical fluctuations in atomic Bose-Einstein condensates – Fock state sampling approach"
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Pappulab/N130-Liquid-Structure: Biomolecular condensates form spatially inhomogeneous network fluids
<p>This repository contains the data for the Nature Communications manuscript, "Biomolecular condensates form spatially inhomogeneous network fluids" by F. Dar†, S. R. Cohen†, D. M. Mitrea, A. H. Phillips, G. Nagy, W. C. Leite, C. B. Stanley, J-M. Choi†,§, R. W. Kriwacki§, R. V. Pappu§. (†Equal contributors; §Co-corresponding authors). (2024). <a href="https://doi.org/10.1038/s41467-024-47602-z" target="_blank" rel="noopener">https://doi.org/10.1038/s41467-024-47602-z</a></p> <p>For accompanying analysis scripts, please consult: <a href="https://github.com/Pappulab/n130-liquid-structure" target="_blank" rel="noopener">https://github.com/Pappulab/n130-liquid-structure</a>.</p>
YAP single particle tracking data accompanying the paper "YAP condensates are highly organized hubs".
<p><span><span>·<span> </span></span></span><span>Actual_masks: data files “DataAnalyzed” 1-28 (excluding 20) containing the original YAP masks in the variable “MaskIn”.</span></p> <p><span><span>·<span> </span></span></span><span>original_tracks: contains all the trajectories for each cell.</span></p> <p><span><span>·<span> </span></span></span><span>initial_final_nuclearMasks: contains initial and final manually segmented nuclear masks used to extrapolate nuclear masks by “interpolateNuclearMask”.</span></p> <p><span><span>·<span> </span></span></span><span>tracks: tracks pre-segmented manually to only include nuclear tracks (created by “trackDivider”).</span></p> <p> </p>
Origins in the substituent effects in the aldol condensation of axially chiral thiohydantoins: a computational study
<p><span>This study investigates aldol reactions between thiohydantoin derivatives and benzaldehyde, examining the substituent effects on the reaction mechanisms and reaction enantioselectivity. Agreement of calculations (M06-2X/6-311+G</span><span>(d,p) /</span><span> CPCM(THF)) with experiment suggests that the enantioselectivity is predominantly governed by thermodynamic control. Furthermore, distortion/interaction analysis elucidates the role of steric hindrance in determining product distributions.</span></p>
Emerging supersolidity in photonic crystal polariton condensates
<p>These are the processed datasets for the figures in the main text of "Emerging supersolidity in photonic crystal polariton condensates" as appears in Nature.</p>
Research data supporting: "Exploring RNA destabilization mechanisms in biomolecular condensates through atomistic Simulations"
<p>This repository contains the data to reproduce the results shown in the bioRxiv preprint "Exploring RNA Destabilization Mechanisms in Biomolecular Condensates through Atomistic Simulations" (DOI: 10.1101/2024.09.13.612876).</p>
Data for "Boson-fermion pairing and condensation in two-dimensional Bose-Fermi mixtures"
<p>Data and Python scripts for reproducing figures of: Leonardo Pisani, Pietro Bovini, Fabrizio Pavan, and Pierbiagio Pieri, "Boson-fermion pairing and condensation in two-dimensional Bose-Fermi mixtures" (2024). <br><br>Arxiv: </p> <table> <tbody> <tr> <td><span><a href="https://arxiv.org/abs/2405.05029">arXiv:2405.05029</a></span></td> </tr> </tbody> </table> <p> </p>
Dataset and software for "Photon Condensation and Enhanced Magnetism in Cavity QED"
<p>Python code used to generate the results and figures in "Photon Condensation and Enhanced Magnetism in Cavity QED".</p> <p>Disclaimer: The code is not self-explanatory nor is it written with the goal of being production-quality code. Its publication in this repository serves the sole purpose of transparency and open science. For help on how to use it please refer to jroman@unizar.es</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.