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Dataset results
154 results for “cyanobacterium”
Roles of close homologues SigB and SigD in heat and bright light acclimation of the cyanobacterium Synechocystis sp. PCC 6803
GEO Series GSE192357. Synechocystis sp. PCC 6803. 45 samples. Type: Expression profiling by high throughput sequencing.
Biogeographic conservation and CO2-dynamics of the cytosine methylome in the globally important cyanobacterium Trichodesmium [RNA-Seq]
GEO Series GSE86991. Trichodesmium erythraeum IMS101. 4 samples. Type: Expression profiling by high throughput sequencing.
Biogeographic conservation and CO2-dynamics of the cytosine methylome in the globally important cyanobacterium Trichodesmium [WGBS]
GEO Series GSE86979. Trichodesmium erythraeum IMS101; Trichodesmium; Trichodesmium erythraeum 21-75; Trichodesmium thiebautii VI-1. 11 samples. Type: Methylation profiling by high throughput sequencing.
The hierarchy of transition metal homeostasis: Iron controls manganese accumulation in a unicellular cyanobacterium.
GEO Series GSE48416. Synechocystis sp. PCC 6803. 10 samples. Type: Expression profiling by array.
Ambigols from the Cyanobacterium Fischerella ambigua increase Prodigiosin Production in Serratia sp.
GEO Series GSE151437. Prodigiosinella confusarubida. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic responses of the cyanobacterium Synechococcus sp. PCC 7002 under growth-inhibiting high CO2 concentration
GEO Series GSE278109. Picosynechococcus sp. PCC 7002. 16 samples. Type: Expression profiling by high throughput sequencing.
Elucidating the direct target regulon of NtcA during the early acclimation to nitrogen starvation in the cyanobacterium Synechocystis sp. PCC 6803 [RNA-Seq]
GEO Series GSE97289. Synechocystis sp. PCC 6803. 4 samples. Type: Expression profiling by high throughput sequencing.
The orthologue of the RNA chaperone Hfq is essential for cell motility of the cyanobacterium Synechocystis PCC 6803
GEO Series GSE10708. Synechocystis sp. PCC 6803. 8 samples. Type: Expression profiling by array.
Identification of the global transcriptional regulator All3953 (RbcR) in the cyanobacterium Anabaena sp. PCC 7120 by ChIP-Seq analysis
GEO Series GSE58861. Nostoc sp. PCC 7120 = FACHB-418. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942
GEO Series GSE205445. Synechococcus elongatus PCC 7942 = FACHB-805. 46 samples. Type: Expression profiling by high throughput sequencing; Other.
ChIP analysis unravels an exceptionally wide distribution of binding sites for the NtcA transcription factor in a heterocyst-forming cyanobacterium.
GEO Series GSE51865. Anabaena. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptomic response to long time ethanol production in the cyanobacterium Synechocystis sp. PCC6803
GEO Series GSE49552. Synechocystis sp. PCC 6803. 16 samples. Type: Expression profiling by array.
Photomixotrophic growth protein A (PmgA) regulates carbohydrate metabolism through the non-coding RNA Ncr0700/PmgR1 in the cyanobacterium Synechocystis sp. PCC 6803
GEO Series GSE77118. Synechocystis sp. PCC 6803. 5 samples. Type: Expression profiling by array.
Transcriptional cycle suited to daytime N2 fixation in the unicellular cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A)
GEO Series GSE100124. Candidatus Atelocyanobacterium thalassae. 12 samples. Type: Expression profiling by array.
DNA-methylation of GGCC motifs via M.Ssp6803II is linked to DNA repair in the cyanobacterium Synechocystis sp. PCC 6803
GEO Series GSE126285. Synechocystis sp. PCC 6803. 16 samples. Type: Expression profiling by array.
Data from: Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus
The marine cyanobacterium Prochlorococcus is the numerically dominant photosynthetic organism in the oligotrophic oceans, and a model system in marine microbial ecology. Here we report 27 new whole genome sequences (2 complete and closed; 25 of draft quality) of cultured isolates, representing five major phylogenetic clades of Prochlorococcus. The sequenced strains were isolated from diverse regions of the oceans, facilitating studies of the drivers of microbial diversity—both in the lab and in the field. To improve the utility of these genomes for comparative genomics, we also define pre-computed clusters of orthologous groups of proteins (COGs), indicating how genes are distributed among these and other publicly available Prochlorococcus genomes. These data represent a significant expansion of Prochlorococcus reference genomes that are useful for numerous applications in microbial ecology, evolution and oceanography.
An environmentally induced multicellular life cycle of a unicellular cyanobacterium
<p>Data used in the manuscript by Tang, Pichugin, Hammerschmidt <a href="https://doi.org/10.1101/2021.09.29.462355">https://doi.org/10.1101/2021.09.29.462355</a></p>
Data from: Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus
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The ω subunit of RNA polymerase is essential for thermal acclimation of the Cyanobacterium Synechocystis sp. PCC 6803
GEO Series GSE59451. Synechocystis sp. PCC 6803. 13 samples. Type: Expression profiling by array.
Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942 [RNA-seq]
GEO Series GSE205444. Synechococcus elongatus PCC 7942 = FACHB-805. 21 samples. Type: Expression profiling by high throughput sequencing.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.