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134 results for “range dynamics”
Data and scripts for: An analysis of the dynamic range of Distributed Acoustic Sensing for Earthquake Early Warning
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A quantitative autonomous bioluminescence reporter system with a wide dynamic range for Plant Synthetic Biology
<p>This data set includes: Luminescence (NeoLuc Luminescence), Fluorescence (eGFP) , NeoLuc/eGFP ratios, Area Under The Curve of NeoLuc/eGFP ratios, Normalized Area Under The Curve of Neoluc/eGFP (FBP-RTAs), Firefly Luciferase luminescence (FLuc), Renilla Luciferase luminescence (RLuc), FLuc/RLuc ratios and Normalized FLuc/RLuc values of all experiments in this work. </p>
Data from: Reconstructing geographic range size dynamics from fossil data
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Data from: Species’ range dynamics affect the evolution of spatial variation in plasticity under environmental change
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Data from: Data from: Seasonal polyphenism of Spotted-wing Drosophila is affected by variation in local abiotic conditions within its invaded range, likely influencing survival and regional population dynamics
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Data from: Interspecific geographic range size–body size relationship and the diversification dynamics of Neotropical Furnariid birds
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Data from: Host use dynamics in a heterogeneous fitness landscape generates oscillations in host range and diversification
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Dynamic regulation of histone modifications and long-range chromosomal interactions during post-mitotic transcriptional reactivation
GEO Series GSE141139. Homo sapiens. 114 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Dynamic regulation of histone modifications and long-range chromosomal interactions during post-mitotic transcriptional reactivation [ChIP-seq]
GEO Series GSE141081. Homo sapiens. 60 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Examination of E. faecalis toxin-antitoxin (TA) toxin Fst function utilizing a pheromone-inducible expression vector with tight repression and large dynamic range
GEO Series GSE96072. Enterococcus faecalis. 4 samples. Type: Expression profiling by high throughput sequencing.
Dynamic regulation of histone modifications and long-range chromosomal interactions during post-mitotic transcriptional reactivation [EU-RNA-seq]
GEO Series GSE141137. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing.
Long-range phasing of dynamic, tissue-specific and allele-specific regulatory elements
GEO Series GSE183760. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other; Methylation profiling by high throughput sequencing.
Experience recruits MSK1 to expand the dynamic range of synapses and enhance cognition
GEO Series GSE149210. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease
GEO Series GSE124463. Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Med1 facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination.
GEO Series GSE62969. Mus musculus. 18 samples. Type: Other.
Chromatin connectivity maps reveal dynamic promoter-enhancer long-range associations
GEO Series GSE44067. Mus musculus. 8 samples. Type: Other; Expression profiling by high throughput sequencing.
Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency
GEO Series GSE72164. Mus musculus. 76 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Data from: Geographic ranges of genera and their constituent species: structure, evolutionary dynamics, and extinction resistance
We explore the relationships among the geographic ranges of genera, the ranges and positions of their constituent species, and the number of species they contain, considering variation among coeval genera and changes within genera over time. Measuring range size as the maximal distance, or extent, between occurrences within a taxon, we find that the range of the most widespread species is a good predictor of the range of the genus, and that the number of species is a better predictor still. This analysis is complicated by a forced correlation: the range of a genus must be at least as large as that of each of its constituent species. We therefore focus on a second measure of range, the mean squared distance, or dispersion, of occurrences from the geographic centroid, which, by analogy to the analysis of variance, allows the total dispersion of a genus to be compared to the mean within-species dispersion and the dispersion among species centroids. We find that among-species dispersion is the principal determinant of genus dispersion. Within-species dispersion also plays a major role. The role of species richness is relatively small. Our results are not artifacts of temporal variation in the geographic breadth of sampled data. The relationship between changes in genus dispersion and changes in within- and among-species dispersion shows a symmetry, being similar in cases when the genus range is expanding and when it is contracting. We also show that genera with greater dispersion have greater extinction resistance, but that within- and among-species dispersion are not demonstrable predictors of survival once the dispersion of the genus is accounted for. Thus it is the range of the genus, rather than how it is attained, that is most relevant to its fate. Species richness is also a clear predictor of survival, beyond its effects on geographic range.
Data from: Phylogeographic diversification and postglacial range dynamics shed light on the conservation of the kelp Saccharina japonica
Studies of postglacial range shifts could enhance our understanding of seaweed species' responses to climate change, and hence facilitate the conservation of natural resources. However, the distribution dynamics and phylogeographic diversification of the commercially and ecologically important kelp Saccharina japonica in the Northwest Pacific (NWP) are still poorly surveyed. In this study, we analyzed the evolutionary history of S. japonica using two mitochondrial markers and 24 nuclear microsatellites. A STRUCTURE analysis revealed two partially isolated lineages: lineage H, which is scattered along the coast of Japan; and lineage P, which occurs along the west coast of the Japan Sea. Ecological niche modeling projections to the Last Glacial Maximum (LGM) revealed that the southern coasts of the Japan Sea and the Pacific side of the Oshima and Honshu Peninsulas provided the most suitable habitats for S. japonica, implying that these regions served as ancient refugia during the LGM. Ancient isolation in different refugia may explain the observed divergence between lineages P and H. An approximate Bayesian computation analysis indicated that the two lineages experienced post‐LGM range expansion, and that postglacial secondary contact occurred in Sakhalin. Model projections into the year 2100 predicted that S. japonica will shift northwards and lose its genetic diversity center on the Oshima Peninsula in Hokkaido and Shimokita Peninsula in Honshu. The range shifts and evolutionary history of S. japonica improve our understanding of how climate change impacted the distribution range and diversity of this species and provide useful information for the conservation of natural resources under ongoing environmental change in the NWP.
The Dynamic Range of Acidity: Tracking Rules for the Unidirectional Penetration of Cellular Compartments
<p>Original data</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.