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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
Single-cell analysis of bidirectional reprogramming between early embryonic states reveals mechanisms of differential lineage plasticities [scATAC-seq]
GEO Series GSE276702. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Identifying cross-lineage dependencies of cell-type specific regulators in gastruloids [scATAC-seq]
GEO Series GSE217905. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Gene regulatory programs of NK cells show that NCAM1 (CD56) and KIRs are controlled by genetically polymorphic distal regulatory elements [scATAC-seq]
GEO Series GSE297712. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-omic analysis reveals retinoic acid molecular drivers for fibrosis and regenerative repair in skin fibrosis [scATAC-seq]
GEO Series GSE278069. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spatiotemporal molecular profiling of macrophage-fibroblast crosstalk defines checkpoints orchestrating onset and resolution of inflammation [scATAC-Seq]
GEO Series GSE316802. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deciphering the spatio-temporal transcriptional and chromatin accessibility of human retinal organoid development at the single cell level [scATAC-Seq]
GEO Series GSE235577. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [Celline_scATAC]
GEO Series GSE173930. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes [scATAC-seq - LSK].
GEO Series GSE216506. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genetic variation in IL-4 activated tissue resident macrophages alters the epigenetic state to determine strain specific synergistic responses to LPS [scATAC-seq]
GEO Series GSE248035. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
scATAC-seq data of pig brains
GEO Series GSE281568. Sus scrofa. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Clonal expansion and epigenetic inheritance shape long-lasting NK cell memory [scATAC in vitro]
GEO Series GSE197033. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [BMMNC_scATAC_ASAP]
GEO Series GSE173933. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Clonal expansion and epigenetic inheritance shape long-lasting NK cell memory [scATAC ex vivo]
GEO Series GSE197008. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Beta cell-specific CD8+ T cells maintain stem-cell memory-associated epigenetic programs during type 1 diabetes (scATAC-seq)
GEO Series GSE144692. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell chromatin accessibility data using scATAC-seq
GEO Series GSE65360. Homo sapiens; Mus musculus. 1632 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Inhibition of EB3 activates the Meis2-Pax6 regenerative program in wet AMD [scATAC-seq]
GEO Series GSE228270. Chlorocebus sabaeus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Subtype Heterogeneity and Epigenetic Convergence in Neuroendocrine Prostate Cancer [scATAC-seq]
GEO Series GSE262623. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell ATAC-Seq (scATAC-Seq) of mouse basal cell carcinoma (BCC) immune cells.
GEO Series GSE204863. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Patterns of intra- and inter-tumor phenotypic heterogeneity in men with lethal prostate cancer [scATAC-seq]
GEO Series GSE292194. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcription factor NFYA directs male meiotic entry by facilitating accessible chromatin at the promoters of genes expressed during meiosis [scRNA-seq & scATAC-seq]
GEO Series GSE296438. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.