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894
datasets available to search
ShareScore release 0.7.1
Dataset results
894 results for “single-cell RNA-seq”
Integration of single-cell transcriptomes and biological function reveals distinct behavioral patterns in bone marrow endothelial cells [bulk RNA-seq]
GEO Series GSE206975. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Single-cell 3D genome structure reveals distinct human pluripotent states (RNA-Seq)
GEO Series GSE260994. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA-seq Transcriptome Profiling from Male Germ Cells Isolated from Late Fetal and Neonatal Mouse Testes
GEO Series GSE124904. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
A single-cell RNA-seq atlas of the pathogenic stage of Schistosoma mansoni identifies a key regulator of blood feeding [RNA-Seq]
GEO Series GSE146735. Schistosoma mansoni. 6 samples. Type: Expression profiling by high throughput sequencing.
Generation of Blastocyst-like Structures from Extended Pluripotent Stem Cells (single-cell RNA-Seq)
GEO Series GSE135701. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification
GEO Series GSE118614. Mus musculus. 882 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq uncovers cellular heterogeneity of granulosa cells and provides a signature for follicular development in chicken
GEO Series GSE291444. Gallus gallus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of CD8 T cells sorted from one sample of seropositive rheumatoid arthritis synovial fluid
GEO Series GSE202366. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas
GEO Series GSE111672. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing.
Targeted single-cell RNA-seq identifies minority cell types of kidney distal nephron & A Comprehensive Map of mRNAs and Their Isoforms across All 14 Renal Tubule Segments of Mouse
GEO Series GSE150338. Mus musculus. 96 samples. Type: Expression profiling by high throughput sequencing.
Improved bacterial single-cell RNA-seq through automated MATQ-seq [bulk RNA-seq]
GEO Series GSE218631. Salmonella enterica subsp. enterica serovar Typhimurium. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq reveals intratumoral heterogeneity in primary uveal melanomas and discloses new targetable vulnerability
GEO Series GSE138433. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis of human tonsil CD4 T cells
GEO Series GSE119507. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of the esophagus of Keratin5CreERT2::Keap1 floxB/floxB and Keap1 floxB/floxB mice
GEO Series GSE197558. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Adapting the 10x Genomics Platform for single-cell RNA-seq in yeast reveals the importance of stochastic gene expression during the lag phase
GEO Series GSE144820. Saccharomyces cerevisiae. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling for metastatic renal cell carcinoma patient-derived cells [RNA-seq]
GEO Series GSE73121. Homo sapiens. 121 samples. Type: Expression profiling by high throughput sequencing.
Coupling shRNA screening with single-cell RNA-Seq identifies mechanisms regulating senescence during reprogramming
GEO Series GSE95020. Homo sapiens. 376 samples. Type: Expression profiling by high throughput sequencing.
Sox9 switch links regeneration to fibrosis at the single-cell level in mammalian kidneys [RNA-Seq 2]
GEO Series GSE249778. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq data for control and POU IV-misexpressed Ciona intestinalis embryos at late tailbud (LTB) stage
GEO Series GSE192645. Ciona intestinalis. 2 samples. Type: Expression profiling by high throughput sequencing.
The Human Testis Cell Atlas via Single-cell RNA-seq (Infant scRNA-seq data set)
GEO Series GSE120506. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.