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FIGURE 5 in A new species of the cardinalfish genus Apogon (Teleostei, Apogonidae) from the southern Red Sea and Indian Ocean with comments on phylogenetic relationships within the Apogonini
FIGURE 5. Species of the Apogon unicolor group. A: A. caudicinctus, BPBM 13002, holotype, 52.5 mm SL, Rapa Island; B: A. caudicinctus, NBE106, 84.0 mm SL, Madagascar; C: A. dianthus, BPBM 9360, holotype, 48.0 mm SL, Palau Islands; D: A. soloriens, KAUM-I.74702, 23.5 cm SL, Bonin Islands, Ogasawara Islands; E: A. talboti, SMF 35881 [KAU17-242], 44.0 mm SL, Abkar I., Farasan Archipelago, Saudi Arabia; F: A. unicolor, KAUM-I29415, 105 mm SL, Iou-jima I., Japan. Specimen length for images A & C is as given in the original descriptions depicting the same photos. Photos by J.E. Randall (A & C), N. Hubert (B), Kagoshima University Museum (D & F), and S.V. Bogorodsky (E).
FIGURE 3 in A new species of the cardinalfish genus Apogon (Teleostei, Apogonidae) from the southern Red Sea and Indian Ocean with comments on phylogenetic relationships within the Apogonini
FIGURE 3. Maximum likelihood phylogeny of the apogonine cardinalfishes (tribe Apogonini) based on a concatenated alignment of (partial) mitochondrial COI and rDNA and nuclear RAG1 and ENC1 genes (specimens for which more than COI sequences were available are in bold letters). Branch support values were obtained by 200 bootstrapped replicates; only bootstrap values above 50 percent are shown (* = 100 %). The scale bar represents average number of nucleotide substitutions. M = sequences retrieved from Mabuchi et al. (2014); P = sequences obtained in the present study; B = sequence retrieved from BOLD; C = sequence retrieved from CRIOBE; G = sequence retrieved from GenBank; ID = species ID re-assigned herein. Collection location of sequence voucher is provided if available (n/a = not available).
FIGURE 1. Apogon fugax new species. A in A new species of the cardinalfish genus Apogon (Teleostei, Apogonidae) from the southern Red Sea and Indian Ocean with comments on phylogenetic relationships within the Apogonini
FIGURE 1. Apogon fugax new species. A: SMF 35884 [KAU14-542], holotype, fresh specimen, 46.2 mm SL, off Jizan, Saudi Arabia, Red Sea; B: SAIAB 203703, paratype, fresh specimen, 59.7 mm SL, Myanmar; C: CSIRO H 6378-16 [BW-A4835], paratype, preserved specimen, 52.9 mm SL, Western Australia. Photos by S.V. Bogorodsky (A), O. Alvheim (B), and curtesy of the CSIRO Australian National Fish Collection (C).
FIGURE 11 in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURE 11. Cladistic relationship among the Oriental species of the genus Polypedilum (CI 0.18, RI 0.79).
FIGURES 9A–B in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 9A–B. Polypedilum (Polypedilum) tamanigrum Sasa, 1983. A, Hypopygium (Photograph) of adult male. Scale: 0.1 mm; B, Neighbor-Joining tree based on the COX1 gene sequences of Polypedilum (Polypedilum) tamanigrum and 28 reference sequences of chironomine midges from GenBank. Red circles mark nodes. Scale: 0.01 substitutions per nucleotide position.
FIGURES 10A–C in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 10A–C. Photographs of adult male of Zavreliella marmorata (Wulp, 1985). A, Wing; B, Hypopygium; C, Abdomen. All to scale: 1 mm.
FIGURES 4A–B in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 4A–B. Adult male of Polypedilum (Pentapedilum) anale (Freeman, 1954) A, Hypopygium, scale: 0.01 mm; B, Wing (Photograph), scale: 20 mm.
FIGURES 2A–I in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 2A–I. Pupa of Polypedilum (Pentapedilum) retusum sp. n. A, Cephalothorax, scale: 0.05 mm; B, Basal ring, scale: 0.1 mm; C, Wing sheath (Photograph); D, Wing sheath, scale: 0.1 mm; E, Abdomen (T I–VII), scale: 0.4 mm; F, Hookrow (T II), scale: 0.1 mm; G, T VIII and anal lobe (Photograph), scale: 0.1 mm; H, T VIII and anal lobe, scale: 0.2 mm; I, Spine at posterolateral corner of T VIII, scale: 0.05 mm.
FIGURE 3 in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURE 3. Neighbor-Joining tree based on the COX1 gene sequences of Polypedilum (Pentapedilum) retusum sp. n. and four reference sequences from GenBank. Red circles mark nodes. Scale: 0.03 substitutions per nucleotide position.
FIGURES 1A–D in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 1A–D. Adult male of Polypedilum (Pentapedilum) retusum sp. n. A, Wing (Photograph); B, Wing, scale: 1 mm; C, Hypopygium (Photograph); D, Hypopygium, scale: 0.01 mm.
FIGURES 5A–B in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 5A–B. Adult male of Polypedilum (Polypedilum) ascium Chaudhuri, Guha and Dasgupta, 1981. A, Hypopygium; B, Superior volsella. Both to scale: 0.01 mm.
FIGURES 7A–B. A in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 7A–B. A, Hypopygium of adult male Polypedilum (Tripodura) lineatum Chaudhuri, Guha and Dasgupta, 1981. Scale: 0.1 mm; B, Neighbor-Joining tree based on the COX1 gene sequences of Polypedilum (Tripodura) lineatum and three reference sequences of from GenBank. Circles mark nodes. Scale: 0.02 substitutions per nucleotide position.
FIGURES 6A–F in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 6A–F. Adult (A) and pupa (B–F) of male Polypedilum (Tripodura) conghuaense Zhang, Song, Qi and Wang, 2016. A, Hypopygium of adult male; B, Frontal apotome; C, Basal ring; D, T I–VII; E, T VIII and anal lobe; F, Caudolateral spur. All to scale: 0.01 mm.
FIGURES 8A–B in Revision of the Oriental species of Polypedilum Kieffer (Diptera: Chironomidae) with their phylogenetic relationship
FIGURES 8A–B. Adult male of Polypedilum (Polypedilum) nudiceps Chaudhuri, Guha and Dasgupta, 1981. A, Hypopygium; B, Variation of superior volsella. Both to scale: 0.1 mm.
FIGURE 1. Maximum Likelihood tree showing phylogenetic relationships among 124 in New insights on the systematics and reproductive behaviour in tree frogs of the genus Feihyla, with description of a new related genus from Asia (Anura, Rhacophoridae)
FIGURE 1. Maximum Likelihood tree showing phylogenetic relationships among 124 representative taxa from all recognised genera of the subfamily Rhacophorinae. Relationships are inferred based on 1,937 bp of mitochondrial (12SrRNA, tRNAVAL, 16SrRNA) and nuclear (RHO and RAG1) genes. Numbers above and below the branches indicate Bayesian Posterior Probabilities and RAxML bootstrap support values, respectively.
FIGURE 3. Phylogenetic relationships among the Centropomus 16S in Revision of the diagnostic characters of two morphologically similar snook species Centropomus viridis and C. nigrescens (Carangiformes: Centropomidae)
FIGURE 3. Phylogenetic relationships among the Centropomus 16S rRNA gene sequences found in the GenBank (March, 2020), only those sequences which overlap with the sequences from this study were selected. Relationships are based on the neighbor-joining method and the Tamura 3-parameter with a gamma distribution (shape parameter = 1). Node value support higher than 60% are shown.
FIGURE 4 in A morphological and molecular phylogenetic analysis of relationships between genera of the nematode sub-family Cloacininae (Stossich) (Strongyloidea Chabertiidae) parasitic in kangaroos, wallabies and rat-kangaroos (Marsupialia Macropodoidea)
FIGURE 4. Morphological phylogenetic analysis of the genera of the Cloacininae. Numerals represent bootstrap values.
FIGURE 5 in A morphological and molecular phylogenetic analysis of relationships between genera of the nematode sub-family Cloacininae (Stossich) (Strongyloidea Chabertiidae) parasitic in kangaroos, wallabies and rat-kangaroos (Marsupialia Macropodoidea)
FIGURE 5. Molecular phylogenetic analysis of available representatives of the Cloacininae based on ITS+ sequence data. GenBank registration numbers for sequence data follow each taxon. Numerals represent posterior probabilities.
FIGURE 1 in A morphological and molecular phylogenetic analysis of relationships between genera of the nematode sub-family Cloacininae (Stossich) (Strongyloidea Chabertiidae) parasitic in kangaroos, wallabies and rat-kangaroos (Marsupialia Macropodoidea)
FIGURE 1. Buccal capsules of representative genera of the Cloacininae (lateral views). A. Rugopharynx rosemariae Beveridge & Presidente (Pharyngostrongylinea); B. Cyclostrongylus kartana (Mawson) (Pharyngostrongylinea); C. Thallostonema lichtenfelsi Beveridge (Zoniolaiminea); D. Tethystrongylus coronatus Beveridge (Zoniolaiminea); E. Parazoniolaimus collaris Johnston & Mawson (Labiostrongylinea); F. Labiostrongylus labiostrongylus Yorke & Maplestone (Labiostrongylinea); G. Rugostrongylus labiatus (Davey & Wood) (Pharyngostrongylinea); H. Pharyngostrongylus kappa Mawson (Pharyngostrongylinea); I. Macroponema comani Mawson (Macropostrongylinea); J. Popovastrongylus pearsoni (Johnston & Mawson) (Coronostrongylinea); K. Popovastrongylus macropodis Beveridge (Coronostrongylinea); L. Alocostoma clelandi (Johnston & Mawson) (Macropostrongylinea); M. Cloacina hydriformis Johnston & Mawson (Cloacininea); N. Monilonema ochetocephalum Beveridge (Macropostrongylinea); O. Wallabinema thylogale Beveridge (Zoniolaiminea); P. Woodwardostrongylus petrogale Beveridge (Pharyngostrongylinea); Q. Dorcopsinema simile Smales (Labiostrongylinea); R. Zoniolaimus mawsonae Beveridge (Zoniolaiminea); S. Coronostrongylus coronatus Johnston & Mawson (Coronostrongylinea); T. Papillostrongylus labiatus Johnston & Mawson (Coronostrongylinea). Figures redrawn from: Beveridge, 1982 (A, B, G, H); Beveridge, 1983 (C, D, O, R), Beveridge, 1986a (tribe Macropostrongylinea) (I); Beveridge, 1986b (Popovastrongylus) (J, K); Beveridge, 1986c (Alocostoma) (L); Beveridge, 1986d (Molinonema) (N); Beveridge, 1998a (P); Beveridge, 1998b (M); Beveridge, 2002 (S); Chilton et al., 2002 (T); Huby-Chilton et al., 2002 (R); Smales, 2002 (E), 1994 (F), 1999 (Q).
FIGURE 3 in A morphological and molecular phylogenetic analysis of relationships between genera of the nematode sub-family Cloacininae (Stossich) (Strongyloidea Chabertiidae) parasitic in kangaroos, wallabies and rat-kangaroos (Marsupialia Macropodoidea)
FIGURE 3. Oesophagi of representative genera of the Cloacininae. A. Cloacina metis Beveridge; B. Coronostrongylus coronatus Johnston & Mawson; C. Wallabinema thylogale Beveridge; D. Spirostrongylus spirostrongylus Yorke & Maplestone; E. Pharyngostrongylus kappa Mawson; F. Zoniolaimus mawsonae Beveridge; G. Thallostonema lichtenfelsi Beveridge; H. Labiomultiplex eugenii (Johnston & Mawson) (Labiostrongylinea). Figures redrawn from Beveridge, 1982 (D, E); Beveridge, 1983 (C, G); Beveridge, 1998a (A); Beveridge, 2002 (B); Huby-Chilton et al., 2002 (F); Smales, 1994 (H).
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.