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2,052 results for “Species tree”
FIGURE 4. Maximum likelihood tree established under TIM3e in Berteroa physocarpa (Brassicaceae), a new species from NW Turkey based on morphological and molecular data
FIGURE 4. Maximum likelihood tree established under TIM3e+G model of DNA substitution in W-IQ-TREE in an analysis of 14 ITS sequences from 11 taxa. Ultrafast bootstrap values are indicated from 1000 replicates.
FIGURE 2. Simira robusta. A. Tree. B in Simira robusta (Rubiaceae, Condamineeae), a new species from the Atlantic Rainforest of south-eastern Brazil
FIGURE 2. Simira robusta. A. Tree. B. Branch with flowers; C. Detail of inflorescences; D. Branch with fruits and seeds. E. Detail of the fruit, note the four lobes forming a cross-like structure, reflexed outwards when fully open. Photos by Geovanne S. Siqueira.
FIGURE 2. Magnolia mercedesiarum. A. Tree. B in Magnolia mercedesiarum (subsect. Talauma, Magnoliaceae): a new Andean species from northern Ecuador, with insights into its potential distribution
FIGURE 2. Magnolia mercedesiarum. A. Tree. B. Flower (forced to open from mature flowerbud). C. Leaf and lateral veins. D. Flower bud. E. Fruit before dehiscence. Photographs A and E by Efren Merino-Santi. B, C and D. by Antonio Vázquez. A tree. B and E from the holotype. C and D from Vázquez et al. 10126.
FIGURE 1. Maximum likelihood tree generated using a in Russula darjeelingensis, a new species from Eastern Himalaya, India
FIGURE 1. Maximum likelihood tree generated using a HYK+G model of nucleotide evolution. Maximum likelihood bootstrap values> 50% (left of /) and Bayesian posterior probabilities> 0.50 (to the right). The scale bar represents the number of expected changes per site. Lactarius torminosus, L. indigo, L. subindigo and L. deliciosus were selected as outgroup taxa for rooting purpose. Russula darjeelingensis is placed in bold font to highlight its phylogenetic position in the tree. Categorizations of Russula species within the tree follows the classification of Hongsanan et al. (2015) and Sarnari (1998).
FIGURE 4. Phylogenetic relationships among the Desmarestia species. A. The neighbor-joining tree was constructed using 2,000 in Desmarestia japonica subsp. angustifolia (Desmarestiales, Phaeophyceae), a new subspecies from Korea
FIGURE 4. Phylogenetic relationships among the Desmarestia species. A. The neighbor-joining tree was constructed using 2,000 bootstrap replicates.
FIGURE 1. Phylogenetic tree inferred from a in Dictyosporella hydei sp. nov., an asexual species from freshwater habitats in China
FIGURE 1. Phylogenetic tree inferred from a maximum likelihood analysis based on LSU sequences of 26 strains representing the species of Dictyosporella and their related species. The RAxML bootstrap support values (MLBS)> 75 and Bayesian posterior probabilities (BPP)> 0.90 are given on the nodes (MLBS/BPP). The tree is rooted to Dothidea berberidis (CBS 187.58). The type strains were marked with a "T".
FIGURE 2. Vantanea maculicarpa. A. Flowering branch. B in Vantanea maculicarpa (Humiriaceae): a new tree species from French Guiana
FIGURE 2. Vantanea maculicarpa. A. Flowering branch. B. Detail of stamens. C. Mature leaf. D. Medial section of flower. E. Flower at anthesis. F. Flower bud. G. Mature (left) and immature (right) fruit. H. Endocarp. (A–C. Sabatier 5574. D–F. Sabatier & Prévost 4911. G. Sabatier 4898, Sabatier 5342. H. Sabatier 4898). (Drawn by Laurence Ramon)
FIGURE 1 in Vantanea maculicarpa (Humiriaceae): a new tree species from French Guiana
FIGURE 1. Vantanea maculicarpa (photographs A–C by Daniel Sabatier and D–E by Julien Engel). A. Flowering branch. B. Flower buds and flowers. C. Medial section of flower (note the pubescent intrastaminal disk). D. Two fruits (right), transverse section with one seed (below left) and upper view of endocarp (above left). E. Fruit surface showing white lenticels. (A. Sabatier & Prévost 4911. B–C. Sabatier 5574. D–E. Sabatier 4898).
FIGURE 3. Boswellia occulta, from isotype A. Fruits, 4 in Boswellia occulta (Burseraceae), a new species of frankincense tree from Somalia (Somaliland)
FIGURE 3. Boswellia occulta, from isotype A. Fruits, 4-locular with style intact (left) and 5-locular (right); B. Pyrenes, ventral (left) and dorsal (right) views. Scales 2 mm (A), 1 mm (B). Photographs: Henrik Sundberg.
FIGURE 2. Boswellia occulta, from the type locality A in Boswellia occulta (Burseraceae), a new species of frankincense tree from Somalia (Somaliland)
FIGURE 2. Boswellia occulta, from the type locality A. Tree, in leaf; B. Tree, showing swollen disk-shaped base when growing on rock; C. Branches, showing foliage; D. Trunk with incisions, showing resin oozing out. Photographs: Ahmed Mohamed Dhunkaal.
FIGURE 1 in Boswellia occulta (Burseraceae), a new species of frankincense tree from Somalia (Somaliland)
FIGURE 1. Holotype of Boswellia occulta, with field label and still unmounted. Photograph: Stephen P. Johnson.
FIGURE 8 in Flower of the heart, Magnolia yajlachhi (subsect. Talauma, Magnoliaceae), a new species of ceremonial, medicinal, conservation and nurse tree relevance in the Zapotec culture, Sierra Norte de Oaxaca, Mexico
FIGURE 8. Magnolia yajlachhi (left side). A. Open flower. C. Mature fruit before dehiscence. E. Fruit axis with seeds, after circumscissile dehiscence. Magnolia mexicana (right side) B. Open flower. D. Mature Fruit before dehiscence. F. Fruit axis with seeds, after circumscissile dehiscence. (Photographs: A, C and E by R. Domínguez Yescas; B, D and F by R. Sánchez Cuahua).
FIGURE 7. A. Flower bud bouquet. B in Flower of the heart, Magnolia yajlachhi (subsect. Talauma, Magnoliaceae), a new species of ceremonial, medicinal, conservation and nurse tree relevance in the Zapotec culture, Sierra Norte de Oaxaca, Mexico
FIGURE 7. A. Flower bud bouquet. B. Procession of Good Friday in San Juan Yatzona, using flower buds. C. Sculpture of Jesus on a donkey decorated with flower buds. D. Men of San Juan Yatzona decorating with Magnolia flower buds. E. Altar at San Juan Yatzona´s church decorated with flower buds and bromeliads. F. Tomb in cemetery adorned with Magnolia flower buds (Photographs: A by J. Bautista-Vargas, B by D. Sánchez-Luna, C–D and E by S. A. Hernández-Merlín, F by J. A. Vázquez-García).
FIGURE 6 in Flower of the heart, Magnolia yajlachhi (subsect. Talauma, Magnoliaceae), a new species of ceremonial, medicinal, conservation and nurse tree relevance in the Zapotec culture, Sierra Norte de Oaxaca, Mexico
FIGURE 6. Magnolia yajlachhi at Llano de Piedra. A–B Two kinds of visiting beetles. C–D, F–H. Piercing the flower by beetles (possibly Cyclocephala). E. Two-stem tree (Photographs: A–H by R. Domínguez-Yescas).
FIGURE 5. Magnolia yajlachhi. A in Flower of the heart, Magnolia yajlachhi (subsect. Talauma, Magnoliaceae), a new species of ceremonial, medicinal, conservation and nurse tree relevance in the Zapotec culture, Sierra Norte de Oaxaca, Mexico
FIGURE 5. Magnolia yajlachhi. A. Sterile fruits of a cultivated tree at Juquila Vijanos, Oaxaca, B–D. Fruit, and fruit axis with seeds at Llano de Piedra, E–F. Flowers of a tree within a coffee plantation in Llano de Piedra, Juquila, showing rusty spots due to visiting beetles (Photographs: A–F by R. Domínguez-Yescas).
FIGURE 4. Magnolia yajlachhi. A. Leaves from a young shoot, found under shade. B in Flower of the heart, Magnolia yajlachhi (subsect. Talauma, Magnoliaceae), a new species of ceremonial, medicinal, conservation and nurse tree relevance in the Zapotec culture, Sierra Norte de Oaxaca, Mexico
FIGURE 4. Magnolia yajlachhi. A. Leaves from a young shoot, found under shade. B. Leave exposed to direct sunlight. C. Spathaceous bract protecting the young flower bud. D. Heart shaped flower bud fully grown. E. Flowers at female phase, with sepals at an angle of ca. 30 degrees from the axis, barely opening for beetle entrance. F. Flower at female phase with perpendicular sepals, starting to close, usually with insects inside. G. Flower with reflexed sepals at an angle of ca. 80 degrees. H. Receptive gynoecium, female phase, with stamens. I. Receptive gynoecium (female phase, with stamens removed. J. Stamens. (Photographs: A, E and H–I by J. A. Vázquez-García; B–D, F–G and J by R. Domínguez-Yescas; G and H).
FIGURE 3 in Flower of the heart, Magnolia yajlachhi (subsect. Talauma, Magnoliaceae), a new species of ceremonial, medicinal, conservation and nurse tree relevance in the Zapotec culture, Sierra Norte de Oaxaca, Mexico
FIGURE 3. Magnolia yajlachhi at San Juan Juquila Vijanos, Oaxaca. A–B. Bernardo Domínguez Yescas and his wife, Ma. Luisa PascualYescas, the family that transplanted and cared for seedlings for over a decade, until the trees flowered and turned out to be a new species. C. First documented (2010) open flower at male phase for this species. D. Flower bud flower of the heart, ready to be harvested for decoration, each tree producing up to 200 flower buds. E. Female phase (1:30 pm), with ca. perpendicular sepals, partially opened for beetle entrance, closing latter at night. F. Male phase (8:01 am) fully open flower, after pollen shedding (Photographs: A, D–F by J.A. Vázquez-García; B–C by R. Domínguez-Yescas).
FIGURE 2. Magnolia yajlachhi. A. Flowering branch. B. Flower with reflexed sepals. C in Flower of the heart, Magnolia yajlachhi (subsect. Talauma, Magnoliaceae), a new species of ceremonial, medicinal, conservation and nurse tree relevance in the Zapotec culture, Sierra Norte de Oaxaca, Mexico
FIGURE 2. Magnolia yajlachhi. A. Flowering branch. B. Flower with reflexed sepals. C. Receptive gynoecium (female phase), still retaining the stamens. D. Leaf venation. E. Flower bud without spathaceous bract. F. Fruit axis. G. Fruit. (By Edgar Esau Vázquez Verdejo).
FIGURE 2. Phylogenetic tree generated from a in Two new species of Barssia from China
FIGURE 2. Phylogenetic tree generated from a maximum likelihood analysis based on ITS+nrLSU combined sequences, showing the phylogenetic relationships of the new species. Tuber anniae and T. bellisporum are the outgroups. Likelihood bootstrap support values (≥ 70%) and Bayesian posterior probabilities values (≥ 0.95) are indicated above the nodes as BS/PP. Novel sequences are printed in bold.
FIGURE 1. Phylogenetic tree generated from a in Two new species of Barssia from China
FIGURE 1. Phylogenetic tree generated from a maximum likelihood analysis based on nrLSU sequences, showing the phylogenetic relationships of the new species. Tuber anniae and T. bellisporum are the outgroups. Likelihood bootstrap support values (≥ 70%) and Bayesian posterior probabilities values (≥ 0.95) are indicated above the nodes as BS/PP. Novel sequences are printed in bold.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.