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2,837 results for “Climate Data”
Data from: Population-level plant pollination mode is influenced by Quaternary climate and pollinators
<p>Patterns in ecology are the products of current factors interacting with history. Nevertheless, few studies have attempted to disentangle the contribution of historical and current factors, such as climate change and pollinator identity and behaviour, on plant reproduction. Here, we attempted to separate the relative importance of current and historical processes on geographical patterns of the mating system of the tree species Curatella americana (Dilleniaceae). Specifically, we asked: 1) How do Quaternary and current climate affect plant mating system? 2) How does current pollinator abundance and diversity relate to plant mating system? 3) How does mating system relate to fruit/seed quantity and quality in Curatella americana? We recorded pollinators (richness, frequency and body size) and performed pollination tests in ten populations of C. americana spread over 3,000 km in the Brazilian savannah. The frequency of self-pollination in the absence of pollinators was strongly influenced by historical climatic instability and not by present-day pollinators. In contrast, seed set from hand-cross and natural pollination were affected by pollinators (especially large bees) and temperature, indicating the importance of current factors on out-cross pollination. Two populations at the Southern edge of the species' distribution showed high level of hand-cross-pollination and high flower visitation by large bees, but also a high level of autogamy resulting from recent colonization. Our results indicate that historical instability in climate has favoured autogamy, most likely as a reproductive insurance strategy facilitating colonization and population maintenance over time, while pollinators are currently modulating the level of cross-pollination.</p>
Data from: Combining US and Canadian forest inventories to assess habitat suitability and migration potential of 25 tree species under climate change
Aim: To evaluate current and future dynamics of 25 tree species spanning USA and Canada. Location: USA and Canada Methods: We combine, for the first time, the species compositions from relative importance derived from the USA's Forest Inventory Analysis (FIA) with gridded estimates based on Canada's National Forest Inventory (NFI-kNN) ) based photo plot data to evaluate future habitats and colonization potentials for 25 tree species. Using 21 climatic variables under RCP 4.5 and RCP 8.5, we model climatic habitat suitability (HQ) within a consensus based multi-model ensemble regression approach. A migration model is used to assess colonization likelihoods (CL) for ~100 years and combined with HQ to evaluate the various combinations of HQ+CL outcomes for the 25 species. Results: At a continental scale, many species in the conterminous USA lose suitable climatic habitat (especially under RCP 8.5) while Canada and USA's Alaska gain climate habitat. For most species, even under optimistic migration rates, only a small portion of overall future suitable habitat is projected to be naturally colonized in ~ 100 years, although considerable variation exists among species. Main conclusions: For the species examined here, habitat losses were primarily experienced along southern range limits, while habitat gains were associated with northern range limits (especially under RCP 8.5). However, for many species, southern range limits are projected to remain relatively intact, albeit with reduced habitat quality. Our models predict that only a small portion of the climatic habitat generated by climate change will be colonized naturally by the end of the current century - even with optimistic tree migration rates. However, considerable variation among species points to the need for significant management efforts, including assisted migration, for economic or ecological reasons. Our work highlights the need to employ range-wide data, evaluate colonization potentials, and enhance cross-border collaborations.
Data from: Strong survival selection on seasonal migration versus residence induced by extreme climatic events
<p>1. Elucidating the full eco-evolutionary consequences of climate change requires quantifying the impact of extreme climatic events (ECEs) on selective landscapes of key phenotypic traits that mediate responses to changing environments. Episodes of strong ECE-induced selection could directly alter population composition, and potentially drive micro-evolution. However, to date, few studies have quantified ECE-induced selection on key traits, meaning that immediate and longer-term eco-evolutionary implications cannot yet be considered.</p> <p>2. One widely-expressed trait that allows individuals to respond to changing seasonal environments, and directly shapes spatio-seasonal population dynamics, is seasonal migration versus residence. Many populations show considerable among-individual phenotypic variation, resulting in 'partial migration'. However, variation in the magnitude of direct survival selection on migration versus residence has not been rigorously quantified, and empirical evidence of whether seasonal ECEs induce, intensify, weaken or reverse such selection is lacking.</p> <p>3. We designed full-annual-cycle multi-state capture-recapture models that allow estimation of seasonal survival probabilities of migrants and residents from spatio-temporally heterogeneous individual resightings. We fitted these models to nine years of geographically extensive year-round resighting data from partially migratory European shags (<i>Phalacrocorax aristotelis</i>). We thereby quantified seasonal and annual survival selection on migration versus residence across benign and historically extreme non-breeding season (winter) conditions, and tested whether selection differed between females and males.</p> <p>4. We show that two of four observed ECEs, defined as severe winter storms causing overall low survival, were associated with very strong seasonal survival selection against residence. These episodes dwarfed the weak selection or neutrality evident otherwise, and hence caused selection through overall annual survival. The ECE that caused highest overall mortality and strongest selection also caused sex-biased mortality, but there was little overall evidence of sex-biased selection on migration versus residence.</p> <p>5. Our results imply that seasonal ECEs and associated mortality can substantially shape the landscape of survival selection on migration versus residence. Such ECE-induced phenotypic selection will directly alter migrant and resident frequencies, and thereby alter immediate spatio-seasonal population dynamics. Given underlying additive genetic variation, such ECEs could potentially cause micro-evolutionary changes in seasonal migration, and thereby cause complex eco-evolutionary population responses to changing seasonal environments.</p>
Data used in: "Impacts of predator-mediated interactions along a climatic gradient on the population dynamics of an alpine bird"
<p>Data for:<br> Impacts of predator-mediated interactions along a climatic gradient on the population dynamics of an alpine bird</p> <p>doi: 10.1098/rspb.2020.2653</p> <p>Diana E. Bowler, Mikkel A. J. Kvasnes, Hans C. Pedersen, Brett K. Sandercock, Erlend B. Nilsen</p> <p>Questions to: diana.e.bowler@gmail.com or erlend.nilsen@nina.no</p>
Combining Satellite Remote Sensing and Climate Data in Species Distribution Models to Improve the Conservation of Iberian White Oaks (Quercus L.)
<p>The Iberian Peninsula hosts a high diversity of oak species, being a hot-spot for the conservation of European White Oaks (Quercus) due to their environmental heterogeneity and its critical role as a phylogeographic refugium. Identifying and ranking the drivers that shape the distribution of White Oaks in Iberia requires that environmental variables operating at distinct scales are considered. These include climate, but also ecosystem functioning attributes (EFAs) related to energy–matter exchanges that characterize land cover types under various environmental settings, at finer scales. Here, we used satellite-based EFAs and climate variables in species distribution models (SDMs) to assess how variables related to ecosystem functioning improve our understanding of current distributions and the identification of suitable areas for White Oak species in Iberia. We developed consensus ensemble SDMs targeting a set of thirteen oaks, including both narrow endemic and widespread taxa. Models combining EFAs and climate variables obtained a higher performance and predictive ability (true-skill statistic (TSS): 0.88, sensitivity: 99.6, specificity: 96.3), in comparison to the climate-only models (TSS: 0.86, sens.: 96.1, spec.: 90.3) and EFA-only models (TSS: 0.73, sens.: 91.2, spec.: 82.1). Overall, narrow endemic species obtained higher predictive performance using combined models (TSS: 0.96, sens.: 99.6, spec.: 96.3) in comparison to widespread oaks (TSS: 0.80, sens.: 92.6, spec.: 87.7). The Iberian White Oaks show a high dependence on precipitation and the inter-quartile range of Normalized Difference Water Index (NDWI) (i.e., seasonal water availability) which appears to be the most important EFA variable. Spatial projections of climate–EFA combined models contribute to identify the major diversity hotspots for White Oaks in Iberia, holding higher values of cumulative habitat suitability and species richness. We discuss the implications of these findings for guiding the long-term conservation of IberianWhite Oaks and provide spatially explicit geospatial information about each oak species (or set of species) relevant for developing biogeographic conservation frameworks.</p>
Data from: The importance of using topographic features to predict climate-resilient habitat for migratory forest landbirds: an example for the Rusty Blackbird, Olive-sided Flycatcher, and Canada Warbler
<p>Maintaining a functionally-connected network of high-quality habitat is one of the most effective responses to biodiversity loss. However, the spatial distribution of suitable habitat may shift over time in response to climate change. Taxa such as migratory forest landbirds are already undergoing climate-driven range shifts. Therefore, patches of climate-resilient habitat (also known as "climate refugia") are especially valuable from a conservation perspective. Here, we performed maximum entropy (Maxent) species distribution modeling to predict suitable and potentially climate-resilient habitat in Nova Scotia, Canada, for three migratory forest landbirds: Rusty Blackbird (Euphagus carolinus), Olive-sided Flycatcher (Contopus cooperi), and Canada Warbler (Cardellina canadensis). We used a reverse stepwise elimination technique to identify covariates that influence habitat suitability for the target species at broad scales, including abiotic (topographic control of moisture and nutrient accumulation) and biotic (forest characteristics) covariates. As topography should be relatively unaffected by a changing climate and helps regulate the structure and composition of forest habitat, we posit that the inclusion of appropriate topographic features may support the identification of climate-resilient habitat. Of all covariates, Depth to water table was the most important predictor of relative habitat suitability for the Rusty Blackbird and Canada Warbler, with both species showing a strong association with wet areas. Mean canopy height was the most important predictor for the Olive-sided Flycatcher, whereby the species was associated with taller trees. Our models, which comprise the finest scale species distribution models available for these species in this region, further indicated that, for all species, habitat (1) remains relatively abundant and well distributed in Nova Scotia and (2) is often located in wet lowlands (a climate-resilient topographic landform). These findings suggest that opportunities remain to conserve breeding habitat for these species despite changing temperature and precipitation regimes.</p>
Archive data for: Loss of predation risk from apex predators can exacerbate marine tropicalization caused by extreme climatic events
<p>1. Extreme climatic events (ECEs) and predator removal represent some of the most widespread stressors to ecosystems. Though species interactions can alter ecological effects of climate change (and vice versa), it is less understood whether, when, and how predator removal can interact with ECEs to exacerbate their effects. Understanding the circumstances under which such interactions might occur is critical because predator loss is widespread and ECEs can generate rapid phase shifts in ecosystems which can ultimately lead to tropicalization.</p> <p>2. Our goal was to determine whether loss of predation risk may be an important mechanism governing ecosystem responses to extreme events, and whether the effects of such events, such as tropicalization, can occur even when species range shifts do not. Specifically, our goal was to experimentally simulate loss of an apex predator, the tiger shark (<i>Galeocerdo cuvier</i>) effects on a recently damaged seagrass ecosystem of Shark Bay, Australia by applying documented changes to risk sensitive grazing of dugong (<i>Dugong dugon</i>) herbivores. </p> <p>3. Using a 16-month field experiment established in recently disturbed seagrass meadows, we used previous estimates of risk-sensitive dugong foraging behavior to simulate altered risk-sensitive foraging densities and strategies of dugongs consistent with apex predator loss, and tracked seagrass responses to the simulated grazing.</p> <p>4. Grazing treatments targeted and removed tropical seagrasses, which declined. However, like in other mixed-bed habitats where dugongs forage, treatments also incidentally accelerated temperate seagrass losses, revealing that herbivore behavioral changes in response to predator loss can exacerbate ECE effects and promote tropicalization, even without range expansions or introductions of novel species. </p> <p>5. Our results suggest that changes to herbivore behaviors triggered by loss of predation risk can undermine ecological resilience to ECEs, particularly where long lived herbivores are abundant. By implication, ongoing losses of apex predators may combine with increasingly frequent ECEs to amplify climate change impacts across diverse ecosystems and large spatial scales.</p>
Data from: Wintering bird communities are tracking climate change faster than breeding communities
<p><span>1. Global climate change is driving species' distributions towards the poles and mountain tops during both non-breeding and breeding seasons, leading to changes in the composition of natural communities. However, the degree of season differences in climate-driven community shifts has not been thoroughly investigated at large spatial scales. </span></p> <p><span>2. We compared the rates of change in the community composition during both winter (non-breeding season) and summer (breeding) and their relation to temperature changes.</span></p> <p><span>3. Based on continental-scale data from Europe and North America, we examined changes in bird community composition using the community temperature index (CTI) approach and compared the changes with observed regional temperature changes during 1980–2016.</span></p> <p><span>4. CTI increased faster in winter than in summer. This seasonal discrepancy is probably because individuals are less site-faithful in winter, and can more readily shift their wintering sites in response to weather in comparison to the breeding season. Regional long-term changes in community composition were positively associated with regional temperature changes during both seasons, but the pattern was only significant during summer due to high annual variability in winter communities. Annual changes in community composition were positively associated with the annual temperature changes during both seasons. </span></p> <p><span>5. Our results were broadly consistent across continents, suggesting some climate-driven restructuring in both European and North American avian communities. Because community composition has changed much faster during the winter than during the breeding season, it is important to increase our knowledge about climate-driven impacts during the less-studied non-breeding season.</span></p>
Data to replicate: Forecasting community reassembly using climate-linked spatio-temporal ecosystem models
Ecosystems are increasingly impacted by human activities, altering linkages among physical and biological components. Spatial community reassembly occurs when these human impacts modify the spatial overlap between system components, and there is need for practical tools to forecast spatial community reassembly at landscape scales using monitoring data. To illustrate a new approach, we extend a generalization of empirical orthogonal function (EOF) analysis, which involves a spatio-temporal ecosystem model that approximates coupled physical, biological, and human dynamics. We then demonstrate its application to five trophic levels for the eastern Bering Sea by fitting to multiple, spatially unbalanced datasets measuring physical characteristics (temperature measurements and climate-linked forecasts), primary producers (spring and fall size-fractionated chlorophyll-a), secondary producers (copepods), juveniles (age-0 walleye pollock), adult consumers (five commercially important fishes), human activities (seasonal fishing effort), and mobile predators (seabirds). We identify the spatial niche for each ecosystem component, as well as dominant modes of variability that are highly correlated with a known bottom-up driver of dynamics. We then measure spatial overlap between interacting variables (using Schoener's-D) and identify that age-0 pollock have decreased spatial overlap with copepods and increased overlap with adult pollock during warm years, and also that adult pollock have increased overlap with arrowtooth flounder and decreased overlap with catcher-processor fishing effort during these warm years. Given the warming conditions that are projected for the coming decade, the model forecasts increased prey and competitor overlap involving adult pollock (between age-0 pollock, adult pollock and arrowtooth flounder) and decreased overlap with the copepod forage base and with the catcher-processor fishery during future warming. We recommend that joint species distribution models be extended to incorporate "ecological teleconnections" (correlations between distant locations arising from known mechanisms) arising from behavioral adaptation by mobile animals as well as passive advection of nutrients and planktonic juvenile stages.
Data from: A global phylogeny of turtles reveals a burst of climate-associated diversification on continental margins
<p>Living turtles are characterized by extraordinarily low species diversity given their age. The clade's extensive fossil record indicates that climate and biogeography may have played important roles in determining their diversity. We investigated this hypothesis by collecting a molecular dataset for 591 individual turtles that together represent 80% of all turtle species, including representatives of all families and 98% of genera, and used it to jointly estimate phylogeny and divergence times. We found that the turtle tree is characterized by relatively constant diversification (speciation minus extinction) punctuated by a single threefold increase. We also found that this shift is temporally and geographically associated with newly emerged continental margins that appeared during the Eocene-Oligocene transition about 30 million years before present. In apparent contrast, the fossil record from this time period contains evidence for a major, but regional, extinction event. These seemingly discordant findings appear to be driven by a common global process: Global cooling and drying at the time of the Eocene Oligocene transition. This climatic shift led to aridification that drove extinctions in important fossil-bearing areas, while simultaneously exposing new continental margin habitat that subsequently allowed for a burst of speciation associated with these newly exploitable ecological opportunities.</p>
Data from: Competitive history shapes rapid evolution in a seasonal climate
<p>Eco-evolutionary dynamics will play a critical role in determining species' fates as climatic conditions change. Unfortunately, we have little understanding of how rapid evolutionary responses to climate play out when species are embedded in the competitive communities that they inhabit in nature. We tested the effects of rapid evolution in response to interspecific competition on subsequent ecological and evolutionary trajectories in a seasonally changing climate using a field-based evolution experiment with <i>Drosophila melanogaster</i>. Populations of <i>D. melanogaster</i> were either exposed, or not exposed, to interspecific competition with an invasive competitor, <i>Zaprionus indianus</i>, over the summer. We then quantified these populations' ecological trajectories (abundances) and evolutionary trajectories (heritable phenotypic change) when exposed to a cooling fall climate. We found that competition with <i>Z. indianus </i>in the summer affected the subsequent evolutionary trajectory of <i>D. melanogaster</i> populations in the fall, after all interspecific competition had ceased. Specifically, flies with a history of interspecific competition evolved under fall conditions to be larger, have lower cold fecundity and faster development than flies without a history of interspecific competition. Surprisingly, this divergent fall evolutionary trajectory occurred in the absence of any detectible effect of the summer competitive environment on phenotypic evolution over the summer or population dynamics in the fall. This study demonstrates that competitive interactions can leave a legacy that shapes evolutionary responses to climate even after competition has ceased, and more broadly, that evolution in response to one selective pressure can fundamentally alter evolution in response to subsequent agents of selection.</p>
Data from: Combining climate, land use change and dispersal to predict the distribution of endangered species with limited vagility
<p><b>Aim: </b>Many rare species are dispersal-limited and minimal land use and climate changes can impact their colonization capacity. Most ecological niche models predict the distribution of species under future climate and land use change scenarios without incorporating specie-specific dispersal abilities. Here we investigated the effect of climate and land use change on low vagile species accounting for their dispersal capacity and defined accessible areas in the future.</p> <p><b>Location:</b> Europe.</p> <p><b>Taxon:</b> Saproxylic beetles.</p> <p><b>Methods:</b> We used the current (2007-2012) occurrences of six endangered saproxylics to develop ecological niche models using current climate and land use conditions. We projected species distributions under four future climate and land use change scenarios to estimate their potential occurrences. Finally, accounting for species-specific dispersal, we limited their distributions to accessible areas in 2040-50.</p> <p><b>Results:</b> Without accounting for dispersal abilities we found a strong and positive impact of climate change on the distribution of <i>Cerambix cerdo, Cucujus cinnaberinus, Morimus funereus</i> and <i>Rosalia alpina</i> and a positive effect of land use change on the distribution of <i>Lucanus cervus</i> and <i>Osmoderma eremita.</i> When species-specific dispersal was included, we found a strong and positive impact of land use change on the distribution of all the species. In this case climate change had a lower but positive effect on the distribution of <i>C. cerdo, C. cinnaberinus, L. cervus</i> and <i>R. alpina,</i> and a negative effect on the distribution of O.<i> eremita</i>.</p> <p><b>Main conclusion:</b> We found that climate change would promote the expansion of saproxylic beetles only in the unrealistic case of unlimited dispersal. Accounting for dispersal abilities, the expansion of our species would be mainly conditioned by the effect of land use change. Thus, we encourage researchers to combine climate and land use change with dispersal when projecting species distribution under future scenarios to accurately identify areas with fundamental species-specific resources.</p>
Supplementary Data: Yarlagadda-etal_2022_energy_and_climate_change
<p>GCAM input files needed to run the scenarios in the paper "Climate and air pollution implications of potential energy infrastructure and policy measures in India".</p>
Data from: Dispersal barriers and climate determine the geographic distribution of the helicopter damselfly Mecistogaster modesta
Species' ranges are typically constrained by the interplay of physical barriers to dispersal, environmental requirements such as suitable climatic conditions and biotic constraints such as from predation or competition. However, teasing apart the relative importance of these constraints in determining species distributions still represents a major challenge for ecologists. The Neotropical damselfly Mecistogaster modesta (Coenagrionidae: Odonata) inhabits wet and moist forests in mainland Central America and north-western South America. This habitat specialist spends its larval development exclusively in tank bromeliads, where it acts as a keystone predator within the aquatic food web. Although tank-forming bromeliads occur from the southern United States throughout most of South America, M. modesta is absent from the Caribbean islands and South America south-east of the Andes mountain chain. We employed species distribution models to explore the relative importance of physical barriers (Andes mountain range and oceanic barriers), climate (mean annual temperature and annual precipitation) and biotic interactions (competition from other bromeliad-dwelling odonates) in limiting the geographic distribution of M. modesta. We found that dispersal barriers strongly limit the geographic distribution of M. modesta. In addition, its range is restricted by low temperatures and low precipitation. Competition from other bromeliad-dwelling odonates was not important in limiting the damselfly's range. Because of the physical barriers to dispersal, M. modesta does not occupy its full potential geographic range. Specifically, our model predicted suitable habitat on the Caribbean islands and throughout most of South America, where the species is currently absent. These findings have important conservation implications, particularly as the aridification of rainforests and subsequent localised extinctions due to climate change continue. On the other hand, the species may respond to warming temperatures by tracking climate to higher elevations, with subsequent effects on naïve high-elevation bromeliad food webs. An upwards migration could also increase the probability of M. modesta overcoming the dispersal barrier presented by the Andes, enabling the damselfly to invade large areas of suitable habitat in South America.
Data from: The influence of landscape, climate, and history on spatial genetic patterns in keystone plants (Azorella) on sub-Antarctic islands
The distribution of genetic variation in species is governed by factors that act differently across spatial scales. To tease apart the contribution of different processes, especially at intermediate spatial scales, it is useful to study simpler ecosystems such as those on sub-Antarctic oceanic islands. In this study, we characterize spatial genetic patterns of two keystone plant species, Azorella selago on sub-Antarctic Marion Island and Azorella macquariensis on sub-Antarctic Macquarie Island. Although both islands experience a similar climate and vegetation structure, they differ significantly in topography and geological history. We genotyped six microsatellites for 1149 individuals from 123 sites across Marion Island and 372 individuals from 42 sites across Macquarie Island. We tested for spatial patterns in genetic diversity, including correlation with elevation and vegetation type, and clines in different directional bearings. We also examined genetic differentiation within islands, isolation-by-distance with and without accounting for direction, and signals of demographic change. Marion Island was found to have a distinct northwest-southeast divide, with lower genetic diversity and more sites with signal of population expansion in the northwest. We attribute this to asymmetric seed dispersal by the dominant northwesterly winds, and to population persistence in a southwestern refugium during the last Glacial Maximum. No apparent spatial pattern, but greater genetic diversity and differentiation between sites, was found on Macquarie Island, which may be due to the narrow length of the island in the direction of the dominant winds and longer population persistence permitted by the lack of extensive glaciation on the island.
Data from: Adaptation services of floodplains and wetlands under transformational climate change
Adaptation services are the ecosystem processes and services that benefit people by increasing their ability to adapt to change. Benefits may accrue from existing but newly-used services where ecosystems persist, or from novel services supplied following ecosystem transformation. Ecosystem properties that enable persistence or transformation are important adaptation services because they support future options. The adaptation services approach can be applied to decisions on trade-offs between currently valued services and benefits from maintaining future options. For example, ecosystem functions and services of floodplains depend on river flows. In those regions of the world where climate change projections are for hotter, drier conditions, floods will be less frequent and floodplains will either persist, though with modified structure and function, or transform to terrestrial (flood-independent) ecosystems. Many currently valued ecosystem services will reduce in supply or become unavailable, but new options are provided by adaptation services. We present a case study from the Murray-Darling Basin, Australia, for operationalizing the adaptation services concept for floodplains and wetlands. We found large changes in flow and flood regimes are likely under a scenario of +1.6°C by 2030, even with additional water restored to rivers under the proposed Murray-Darling Basin Plan. We predict major changes to floodplain ecosystems, including contraction of riparian forests and woodlands and expansion of terrestrial, drought-tolerant vegetation communities. Examples of adaptation services under this scenario include substitution of irrigated agriculture with dryland cropping and floodplain grazing; mitigation of damage from rarer, extreme floods; and increased tourism, recreational and cultural values derived from fewer, smaller wetlands that can be maintained with environmental flows. Management for adaptation services will require decisions on where intervention can enable ecosystem persistence and where transformation is inevitable. New ways of managing water that includes consideration of the increasing importance of adaptation services requires major changes to decision-making that better account for landscape heterogeneity and large-scale change, rather than attempting to maintain ecosystems in fixed states.
Data from: Climate change and human colonization triggered habitat loss and fragmentation in Madagascar.
The relative effect of past climate fluctuations and anthropogenic activities on current biome distribution is subject to increasing attention, notably in biodiversity hot spots. In Madagascar, where humans arrived in the last ~4 to 5,000 years, the exact causes of the demise of large vertebrates that cohabited with humans are yet unclear. The prevailing narrative holds that Madagascar was covered with forest before human arrival and that the expansion of grasslands was the result of human-driven deforestation. However, recent studies have shown that vegetation and fauna structure substantially fluctuated during the Holocene. Here, we study the Holocene history of habitat fragmentation in the north of Madagascar using a population genetics approach. To do so, we infer the demographic history of two northern Madagascar neighbouring, congeneric and critically endangered forest dwelling lemur species—Propithecus tattersalli and Propithecus perrieri—using population genetic analyses. Our results highlight the necessity to consider population structure and changes in connectivity in demographic history inferences. We show that both species underwent demographic fluctuations which most likely occurred after the mid-Holocene transition. While mid-Holocene climate change probably triggered major demographic changes in the two lemur species range and connectivity, human settlements that expanded over the last four millennia in northern Madagascar likely played a role in the loss and fragmentation of the forest cover.
Data from: Phenological responsiveness to climate differs among four species of Quercus in North America
1.The timing of the seasonal activity of organisms is a tractable indicator of climate change. Many studies in North America have investigated the role of temperature on the onset date of phenological transitions in temperate deciduous trees and found that the onset of leafing and flowering in numerous species has occurred earlier in recent years, apparently in response to higher temperatures in winter and spring. 2.Few studies have examined the climatic and biogeographic drivers of phenological responses in water-limited ecosystems or explored inter-specific variation in responses of phenological metrics other than the timing of onset, such as the periodicity or duration of phenological activity. 3.This study used phenological observations of four species of Quercus contributed to the USA National Phenology Network database from 2009-2014 to investigate how responses to climate (temperature and precipitation) and geographic location (latitude, longitude and elevation) varied among two western North American species (Q. agrifolia and Q. lobata) and two eastern and central North American species (Q. alba and Q. rubra). 4.Within years, in species in the western, water-limited ecosystems, the phenological phases observed here (bud break, flowers or flower buds) tend to occur intermittently throughout the growing season, and each event is of longer duration than the same phenophases of the temperate-zone species, rendering a single onset date an incomplete metric with which to track responsiveness or to compare species. By contrast, the eastern/central U.S. species were phenologically more responsive than the western species to spatial and temporal variation in winter, spring, and fall precipitation and maximum temperature. 5.Synthesis: Within and between regions these congeners exhibited a diversity of responses to seasonal temperature and precipitation. This indicates that for predictive model development it is critical to understand how each underlying driver influences species that are adapted to different climatic regimes. These results underscore the value of studying a range of phenological metrics and species from a variety of ecosystems to better predict phenological responses to short-term variation and to long-term change in climate.
Data from: Thermal segregation drives patterns of alder and willow expansion in a montane ecosystem subject to climate warming
1.Tall-shrub expansion into low-statured communities, a hallmark of recent vegetative change across tundra ecosystems, involves three major genera: Alnus, Betula, and Salix. Which genus expands most into tundra landscapes will determine ecosystem properties. 2.We show that Alnus and Salix shrubs segregate thermal space (elevation x insolation) and colonize tundra landscapes differently in response to climate warming, thereby replacing different tundra types. 3.Vegetative change estimated from repeat photography should account for hill-slope. Methodologically, slope determines surface area estimated from orthophotos as projected pixel area times secant of pixel slope. Ecologically, the change in thermally-responsive vegetative area is sensitive to terrain steepness, scaling as the cosecant of hill-slope, so that studies should expect more shrub expansion in areas of shallow slopes than steep slopes. 4.Repeat aerial photography in Alaska's Chugach Mountains from 1972-2012 orthorectified on high-resolution lidar DEM indicated tall Salix was rare in 1972 and colonized warmer slopes by 2012. Tall Alnus colonized steeper, cooler slopes both by 2012 and by 1972. Salix and forest colonized similar thermal space. Colonization probability for both shrub genera was maximized at intermediate elevations. 5.Alnus colonization adjacent to dwarf-shrub tundra was twenty-times as likely as Salix colonization. Salix colonization adjacent to low-shrub/herbaceous tundra was three-times as likely as Alnus colonization. Replacement of dwarf-shrub tundra by Alnus and of low-shrub/herbaceous communities by Salix will affect herbivores and soil properties. 6.Good agreement between observations of plant functional type and multinomial predictions in a thermal space defined by elevation and insolation suggested that these two variables were sufficient for forecast modeling. Spatially explicit, climate-driven GLM multinomial and random forest classification models in available thermal space forecast surface areas of forest, Alnus, Salix, and tundra over a range of warming, modeled as upward shifted isotherms, including expected IPCC scenarios. Both modeling approaches indicated that shrubs may respond non-linearly to warming. 7.Synthesis The provision of taxon-specific coefficients for climate-driven, spatially-explicit models using high resolution digital elevation models is necessary for accurately forecasting vegetative change due to climate warming in montane and arctic regions.
Data from: Disentangling the effect of competition, CO2 and climate on intrinsic water-use efficiency and tree growth
1. Climate change scenarios forecast rising temperatures for the Mediterranean region, which could enhance vulnerability to drought stress in forest ecosystems. The long-term effects of climate forcing on tree performance can be, however, modulated by other environmental factors, such as competition and rising atmospheric CO2 concentrations. 2. We assessed the concomitant effect of competition, climate and CO2 concentrations on the tree-ring δ13C-derived intrinsic water-use efficiency (iWUE) and basal area increments (BAI) of species with different drought tolerance: two Mediterranean deciduous species (Quercus faginea Lam. and Quercus pyrenaica Willd.) and one conifer (Pinus sylvestris L.). Additionally, given that competition may be managed to mitigate the effect of increasing drought stress, we further examined the influence of this variable on iWUE and growth using data compiled from the literature, providing the first review on the response of iWUE to competition. 3. Competition had no significant effect on iWUE in any of the three species studied, whereas, as expected, growth rates were significantly higher under low competition levels. This was consistent with the literature review, which showed that shifts in iWUE with competition changes are rare; supporting the hypothesis that leaf-level gas exchange tends to be a homeostatic trait. In the long term, the three species exhibited a significant increasing trend in iWUE due to the combined effect of increased CO2 concentration, climate and age. Growth, however, was mostly affected by competition and climate and in most cases was not enhanced as a result of the increase in iWUE. 4. Synthesis. Regardless of their functional response to drought, trees respond to reduced competition through structural shifts such as increased radial growth rather than leaf-level gas exchange adjustments. CO2 and climate are, therefore, the main drivers of iWUE variability, rather than competition. Thus, if temperature-induced drought becomes limiting, reducing competition for resources may not offset the detrimental effect of increasing drought stress on tree physiology and growth decline may occur without a CO2 fertilization effect.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.