Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,142
datasets available to search
ShareScore release 0.9.0
Dataset results
2,142 results for “by contact”
Activity-induced gene expression and long-range enhancer-promoter contacts in cohesin-deficient neurons with BDNF
GEO Series GSE172425. Mus musculus. 23 samples. Type: Expression profiling by high throughput sequencing.
Su(Hw) interacts with Combgap to establish long-range chromatin contacts
GEO Series GSE231576. Drosophila melanogaster. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Hi-C analysis of genomic contacts revealed karyotype abnormalities in chicken HD3 cell line
GEO Series GSE217327. Gallus gallus. 2 samples. Type: Other.
Inter-chromosomal contacts demarcate genome topology along a spatial gradient
GEO Series GSE242273. Homo sapiens. 8 samples. Type: Other.
SLAMF1 is regulated by macrophage-CD4 T cell contact and confers protection to Mycobacterium tuberculosis
GEO Series GSE224054. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Activity-by-Contact model of enhancer specificity from thousands of CRISPR perturbations [RNA-Seq human]
GEO Series GSE118843. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Topologically-associating domains and their long-range contacts are established during early G1 coincident with the establishment of the replication timing program
GEO Series GSE66579. Mus musculus. 109 samples. Type: Other.
A combination of transcription factors mediates inducible interchromosomal contacts
GEO Series GSE118118. Saccharomyces cerevisiae; synthetic construct; Saccharomyces cerevisiae x Saccharomyces uvarum. 123 samples. Type: Other; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Defining Cell Type-specific Immune Responses in Allergic Contact Dermatitis by Single-cell Transcriptomics
GEO Series GSE224848. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Satellite glial contact enhances differentiation and maturation of human induced sensory neurons
GEO Series GSE272868. Rattus norvegicus; Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Twins: A deep learning method for replicate-based conformation contact map analysis.
GEO Series GSE233377. Mus musculus. 0 samples. Type: Third-party reanalysis; Other.
Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells (mESC data)
GEO Series GSE123586. Mus musculus. 17 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Activity-induced gene expression and long-range enhancer-promoter contacts in cohesin-deficient neurons (Ribo Tag)
GEO Series GSE172428. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
BET inhibition disrupts transcription but retains enhancer-promoter contact [RNA-seq]
GEO Series GSE139436. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Hypoxia and loss of GCM1 expression prevents differentiation and contact inhibition in human trophoblast stem cells [RNA-Seq 2]
GEO Series GSE276594. Homo sapiens. 45 samples. Type: Expression profiling by high throughput sequencing.
CDK4 Inactivation Hinders Cell Death and Metabolism Remodeling Mitochondria-ER contacts in Triple-Negative Breast cancer cells
GEO Series GSE278524. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Ezh2 regulates Langerhans cell migration and host protection against allergic contact dermatitis
GEO Series GSE122206. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells (KBM7 data)
GEO Series GSE123585. Homo sapiens. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
RNA-seq analysis of in vitro p53+/+ and p53-/- neural progenitor cells (NPCs) upon direct cell-cell contact with primary brain microvascular endothelial cells (bmvEC)
GEO Series GSE165801. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Intra- and interchromosomal contact mapping reveals the Igh locus has extensive conformational heterogeneity and interacts with B-lineage genes
GEO Series GSE208602. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.