Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
150
datasets available to search
ShareScore release 0.9.0
Dataset results
150 results for “Brassica rapa”
DNA methylation dynamics in male germline development in Brassica rapa [RNA-seq/Bisulfite-seq]
GEO Series GSE248075. Brassica rapa. 20 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Genome-wide gene expression disturbance by single a A1/C1 chromosome substitution line in Brassica rapa restituted from natural B. napus
GEO Series GSE108122. Brassica rapa. 9 samples. Type: Expression profiling by high throughput sequencing.
Elucidation of stress memory inheritance through epigenome alterations in Brassica rapa plants
GEO Series GSE58897. Brassica rapa. 60 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Transcriptome analysis of Brassica rapa near-isogenic lines carrying clubroot-resistant and -susceptible alleles in response to Plasmodiophora brassicae during early infection
GEO Series GSE74044. Brassica rapa. 8 samples. Type: Expression profiling by high throughput sequencing.
Elucidation of stress memory inheritance through epigenome alterations in Brassica rapa plants [RNA-seq]
GEO Series GSE58895. Brassica rapa. 28 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of Brassica rapa subsp. pekinensis treated with immunity elicitors
GEO Series GSE150746. Brassica rapa. 23 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive analysis of genic male sterility-related genes in Brassica rapa using Brassica rapa 300k microarray v2.0
GEO Series GSE47665. Brassica rapa; Brassica rapa subsp. pekinensis. 14 samples. Type: Expression profiling by array.
Calcium and Magnesium responses in Brassica rapa
GEO Series GSE44185. Brassica rapa. 279 samples. Type: Expression profiling by array.
Expression analysis of low-temperature and warming treated Chiifu and Kenshin inbred lines to identify high-temperature adaptation-related gene in Brassica rapa.
GEO Series GSE113637. Brassica rapa subsp. pekinensis; Brassica rapa. 6 samples. Type: Expression profiling by array.
Decipherment of transcriptional aneuploidy response patterns of monosomic alien addition lines (MAALs) in a restituted Brassica rapa
GEO Series GSE111510. Brassica rapa. 30 samples. Type: Expression profiling by high throughput sequencing.
Persistence of Escherichia coli in the microbiomes of mizuna mustard (Brassica rapa var. japonica) - does seed sanitization matter?
Seed sanitization via chemical processes removes/reduces microbes from the external surfaces of the seed and thereby could have an impact on the plants' health or productivity. To determine the impact of seed sanitization on the plants' microbiome and pathogen persistence, sanitized and unsanitized seeds from two leafy green crops, red Romaine lettuce (Lactuca sativa cv. 'Outredgeous') and mizuna mustard (Brassica rapa var. japonica) were exposed to Escherichia coli and grown in controlled environment growth chambers simulating environmental conditions aboard the International Space Station. Plants were harvested at four intervals from 7 days post-germination to maturity. The bacterial communities of leaf and root were investigated using the 16S rRNA sequencing while quantitative polymerase chain reaction (qPCR) and heterotrophic plate counts were used to reveal the persistence of E. coli. Result: E. coli was detectable for longer periods of time in plants from sanitized versus unsanitized seeds and was identified in root tissue more frequently than in leaf tissue. 16S rRNA sequencing showed dynamic changes in the abundance of members of the phylum Proteobacteria, Firmicutes, and Bacteroidetes in leaf and root samples of both leafy crops. We observed minimal changes in the microbial diversity of lettuce or mizuna leaf tissue with time or between sanitized and unsanitized seeds. Beta-diversity showed that time had more of an influence on all samples versus the E. coli treatment. Conclusion: Our results indicated that the seed surface sanitization, a current requirement for sending seeds to space, could influence the microbiome. Insight into the changes in the crop microbiomes could lead to healthier plants and safer food supplementation.
Comparison of root and leaf samples from Brassica rapa
GEO Series GSE23409. Brassica rapa; Brassica. 6 samples. Type: Expression profiling by array.
High-throughput sequencing of small RNAs and mRNA transcriptome during Brassica rapa seed development
GEO Series GSE36227. Brassica rapa. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Identification and characterization of miRNAs in oilseed rape (Brassica napus) responsive to the pathogenic fungus Verticillium longisporum infection using Brassica AA (B. rapa) and CC (B. oleracea) a
GEO Series GSE58322. Brassica napus. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
BrphyB is critical for rapid recovery to darkness in mature Brassica rapa leaves
GEO Series GSE135955. Brassica rapa. 28 samples. Type: Expression profiling by high throughput sequencing.
Chloroplast-genome-wide maps of small RNAs in Chinese cabbage (Brassica rapa) and Arabidopsis thaliana (Ler).
GEO Series GSE28281. Brassica rapa subsp. chinensis. 5 samples. Type: Non-coding RNA profiling by high throughput sequencing.
A premature stop codon in BrFLC2 transcript results in early flowering in oilseed-type Brassica rapa plants
GEO Series GSE179970. Brassica rapa. 30 samples. Type: Expression profiling by high throughput sequencing.
Deep small RNA profiling of anthers of Brassica rapa R-o-18 and rdr2 mutant
GEO Series GSE141219. Brassica rapa. 5 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Next Generation Sequencing of non-heading Chinese cabbage (Brassica rapa ssp. chinensis)
GEO Series GSE38722. Brassica rapa subsp. chinensis. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Global Analysis of the Transcriptional Response of Chinese cabbage (Brassica rapa ssp. pekinensis) to Methyl Jasmonate Reveals JA Signaling on Enhancement of Secondary Metabolism Pathways
GEO Series GSE51363. Brassica rapa subsp. pekinensis. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.