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214
datasets available to search
ShareScore release 0.9.0
Dataset results
214 results for “CRISPRi”
CRISPRi RNA-seq from K562 (ENCSR024HAR)
GEO Series GSE127065. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi RNA-seq from K562 (ENCSR369BHC)
GEO Series GSE127113. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi RNA-seq from K562 (ENCSR942XXL)
GEO Series GSE127169. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi RNA-seq from K562 (ENCSR715EDZ)
GEO Series GSE127145. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi RNA-seq from K562 (ENCSR650QAK)
GEO Series GSE127134. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Knockdown specificity of Mobile-CRISPRi system targeting chromosomal mRFP
GEO Series GSE134771. Pseudomonas aeruginosa. 2 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi proliferation dropout screen of EGFR cis-regulatory elements
GEO Series GSE139415. Homo sapiens; synthetic construct. 3 samples. Type: Other.
CRISPRi RNA-seq from K562 (ENCSR126GEQ)
GEO Series GSE127089. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Data from: Filamentation and restoration of normal growth in Escherichia coli using a combined CRISPRi sgRNA/antisense RNA approach
CRISPR interference (CRISPRi) using dCas9-sgRNA is a powerful tool for the exploration and manipulation of gene functions. Here we quantify the reversible switching of a central process of the bacterial cell cycle by CRISPRi and an antisense RNA mechanism. Reversible induction of filamentous growth in E. coli has been recently demonstrated by controlling the expression levels of the bacterial cell division proteins FtsZ/FtsA via CRISPRi. If FtsZ falls below a critical level, cells cannot divide. However, the cells remain metabolically active and continue with DNA replication. We surmised that this makes them amenable to an inducible antisense RNA strategy to counteract FtsZ inhibition. We show that both static and inducible thresholds can adjust the characteristics of the switching process. Combining bulk data with single cell measurements, we characterize the efficiency of the switching process. Successful restoration of division is found to occur faster in the presence of antisense sgRNAs than upon simple termination of CRISPRi induction.
CRISPRi RNA-seq from K562 (ENCSR046FQX)
GEO Series GSE127071. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
A myeloid maturation program initiated by nucleotide depletion during S phase [CRISPRi screen]
GEO Series GSE211065. Mus musculus; Homo sapiens. 27 samples. Type: Other.
An ultraconserved snoRNA-like element in long noncoding RNA CRNDE promotes ribosome biogenesis and cell proliferation (CRISPRi screen) [ACHN]
GEO Series GSE270849. Homo sapiens. 4 samples. Type: Other.
CRISPRi RNA-seq from K562 (ENCSR200UDS)
GEO Series GSE127099. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Targeted modulation of chicken genes in vitro using CRISPRa and CRISPRi toolkit
GEO Series GSE217310. Gallus gallus. 8 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi RNA-seq from K562 (ENCSR800PWS)
GEO Series GSE127156. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Precise measurement of molecular phenotypes with barcode-based CRISPRi screens
GEO Series GSE268777. Saccharomyces cerevisiae. 32 samples. Type: Other.
Single-cell CRISPRi screens of breast cancer associated enhancers
GEO Series GSE224986. Homo sapiens. 94 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi RNA-seq from K562 (ENCSR552HTC)
GEO Series GSE127128. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Data from: Filamentation and restoration of normal growth in Escherichia coli using a combined CRISPRi sgRNA/antisense RNA approach
Open the record for dataset details and reuse information.
CRISPRi RNA-seq from K562 (ENCSR190RZZ)
GEO Series GSE127098. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.