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319
datasets available to search
ShareScore release 0.9.0
Dataset results
319 results for “Intestinal microbiota”
Microbiota-associated intestinal methylation changes confer immune-metabolic gene network of NEC in preterm pig model
GEO Series GSE88697. Sus scrofa. 14 samples. Type: Methylation profiling by high throughput sequencing.
Microbiota-derived pentanoate promotes differentiation of regulatory T cells via enhancing iron uptake in the intestine [Treg_in_vivo]
GEO Series GSE195603. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Paneth cell-derived intestinal luminal lysozyme shapes mucolytic microbiota and controls mucosal inflammatory tone
GEO Series GSE151151. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
The intestinal microbiota programs DNA methylation to control tissue homeostasis and inflammation [ATAC-Seq]
GEO Series GSE141458. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The intestinal microbiota reprograms intestinal lipid metabolism through long non-coding RNA Snhg9
GEO Series GSE208020. Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing; Other.
Kruppel-like factor 2+ CD4 T cells avert microbiota induced intestinal inflammation [Fluidgm]
GEO Series GSE236150. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Interplay of host microbiota, genetic perturbations, and inflammation promotes local development of intestinal neoplasms in mice
GEO Series GSE47736. Mus musculus. 12 samples. Type: Expression profiling by array; Expression profiling by high throughput sequencing.
Gene expression profile of small intestine tissue from C57BL/6 mice with or without faecal microbiota transplantation
GEO Series GSE92249. Mus musculus. 20 samples. Type: Expression profiling by array.
Selective induction of homeostatic Th17 cells in the murine intestine by cholera toxin interacting with the microbiota
GEO Series GSE97571. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq of mouse small intestine samples from different Fecal Microbiota Transplantation treatment groups
GEO Series GSE137999. Mus musculus. 23 samples. Type: Expression profiling by high throughput sequencing.
Evaluation of different responses of the intestinal microbiota to a TNF-α mediated pro-inflammatory stimulus by the HTF-Microbi.Array
GEO Series GSE51177. human gut metagenome; synthetic construct. 90 samples. Type: Other.
Depletion of murine intestinal microbiota: effects on gut mucosa and epithelial gene expression
GEO Series GSE22648. Mus musculus. 11 samples. Type: Expression profiling by array.
Intestinal Microbiota Composition is Predictive of Radiotherapy-induced Acute Gastrointestinal Toxicity in Prostate Cancer Patients
GEO Series GSE268869. Bacteria. 215 samples. Type: Other.
Critical Role for a Subset of Intestinal Macrophages in Shaping Gut Microbiota in Adult Zebrafish
GEO Series GSE159845. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Gut microbiota analysis of kdm5 mutant and the flies with KDM5 knockdown in intestine tissue
GEO Series GSE98944. Drosophila melanogaster. 36 samples. Type: Other.
Microbiota-dependent gene expression in small intestinal epithelial cells (IECs)
GEO Series GSE35597. Mus musculus. 4 samples. Type: Expression profiling by array.
c-Maf-dependent Treg cell control of intestinal TH17 cells and IgA establishes host–microbiota homeostasis
GEO Series GSE106396. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Microbiota modulate transcription in the intestinal epithelium without remodeling the accessible chromatin landscape
GEO Series GSE57919. Mus musculus. 39 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
mRNA seq of WT and tp53 e7/e7 mutant in zebrafish intestine with or without gut microbiota.
GEO Series GSE150376. Danio rerio. 8 samples. Type: Expression profiling by high throughput sequencing.
Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences [RNA-Seq]
GEO Series GSE58089. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.