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193 results for “Joining”
FIGURES NJ20, NJ22–NJ26. Neighbor-joining trees. Scale bar = 1%. Blue circles indicate Nearctic specimens, red circles Palearctic specimens, and mixed circles indicate a combination of the two; diamonds indicate outgroups. In parentheses are numbers of specimens per node. NJ20, Coleophora glitzella; NJ22, Coleophora texanella; NJ23, Coleophora vitisella; NJ24, Scythris sinensis; NJ25, Altenia perspersella; NJ26, Gnorimoschema jalavai. in Shared but overlooked: 30 species of Holarctic Microlepidoptera revealed by DNA barcodes and morphology
FIGURES NJ20, NJ22–NJ26. Neighbor-joining trees. Scale bar = 1%. Blue circles indicate Nearctic specimens, red circles Palearctic specimens, and mixed circles indicate a combination of the two; diamonds indicate outgroups. In parentheses are numbers of specimens per node. NJ20, Coleophora glitzella; NJ22, Coleophora texanella; NJ23, Coleophora vitisella; NJ24, Scythris sinensis; NJ25, Altenia perspersella; NJ26, Gnorimoschema jalavai.
FIGURES NJ7–NJ12. Neighbor-joining trees. Scale bar = 1%. Blue circles indicate Nearctic specimens, red circles Palearctic specimens, and mixed circles indicate a combination of the two; diamonds indicate outgroups. In parentheses are numbers of specimens per node. NJ7, Parornix betulae; NJ8, Phyllonorycter maestingella; NJ9, Paraswammerdamia albicapitella; NJ10, Paraswammerdamia conspersella; NJ11, Plutella hyperboreella; NJ12, Lyonetia pulverulentella. in Shared but overlooked: 30 species of Holarctic Microlepidoptera revealed by DNA barcodes and morphology
FIGURES NJ7–NJ12. Neighbor-joining trees. Scale bar = 1%. Blue circles indicate Nearctic specimens, red circles Palearctic specimens, and mixed circles indicate a combination of the two; diamonds indicate outgroups. In parentheses are numbers of specimens per node. NJ7, Parornix betulae; NJ8, Phyllonorycter maestingella; NJ9, Paraswammerdamia albicapitella; NJ10, Paraswammerdamia conspersella; NJ11, Plutella hyperboreella; NJ12, Lyonetia pulverulentella.
FIGURES NJ1–NJ6. Neighbor-joining trees. Scale bar = 1%. Blue circles indicate Nearctic specimens, red circles Palearctic specimens, and mixed circles indicate a combination of the two; diamonds indicate outgroups. In parentheses are numbers of specimens per node. NJ1, Scardia amurensis; NJ2, Triaxomera parasitella; NJ3, Nemapogon cloacella; NJ4, Elabotia montelliella; NJ5, Tinea svenssoni; NJ6, Caloptilia suberinella. in Shared but overlooked: 30 species of Holarctic Microlepidoptera revealed by DNA barcodes and morphology
FIGURES NJ1–NJ6. Neighbor-joining trees. Scale bar = 1%. Blue circles indicate Nearctic specimens, red circles Palearctic specimens, and mixed circles indicate a combination of the two; diamonds indicate outgroups. In parentheses are numbers of specimens per node. NJ1, Scardia amurensis; NJ2, Triaxomera parasitella; NJ3, Nemapogon cloacella; NJ4, Elabotia montelliella; NJ5, Tinea svenssoni; NJ6, Caloptilia suberinella.
FIG. 42. Neighbour-joining dendrogram for 48 in The systematics of Pyrenean and Cantabrian Cochlostoma (Gastropoda, Cyclophoroidea) revisited
FIG. 42. Neighbour-joining dendrogram for 48 populations of Cochlostoma, using Roger's genetic distances calculated from allozyme data.
FIGURE 2. The Neighbor-Joining tree for the cytochrome oxidase c subunit 1 in Mitochondrial diversity of the white-toothed shrews (Mammalia, Eulipotyphla, Crocidura) in Vietnam
FIGURE 2. The Neighbor-Joining tree for the cytochrome oxidase c subunit 1 (COI) gene fragment. The bootstrap values (≥ 50 %) obtained from 1000 pseudoreplications are presented above the branches. Crocidura olivieri is used as outgroup.
FIGURE 3. The Neighbor-Joining tree for the cytochrome b in Mitochondrial diversity of the white-toothed shrews (Mammalia, Eulipotyphla, Crocidura) in Vietnam
FIGURE 3. The Neighbor-Joining tree for the cytochrome b (cytb) gene fragment. Designations as on the Fig. 2. Suncus murinus and S. stoliczkanus are used as outgroup.
Figure 1. Neighbour-joining tree deduced from the cytochrome c oxidase subunit I in DNA barcoding and morphology reveal exceptional species diversity of Scoparia (Lepidoptera: Crambidae) from the Hailuogou Glacier area, China
Figure 1. Neighbour-joining tree deduced from the cytochrome c oxidase subunit I (COI) gene sequences using MEGA 5. Sequences were corrected with the Kimura two-parameter substitution model. Codon positions included were 1st + 2nd + 3rd + noncoding. Values represented at the nodes of branches are bootstrap values (1000 replicates).
FIGURE 3. Neighbor-joining tree for Cytochrome C Oxidase Subunit I in Two new species and three new provincial records of Neoperla (Plecoptera: Perlidae) from Nanling Mountains, China
FIGURE 3. Neighbor-joining tree for Cytochrome C Oxidase Subunit I (COI) sequences (659 bp) from Neoperla annulatispina Mo, Li & Wang, sp. nov. and N. nigromarginata Li & Zhang, 2014, modeled by Kimura-2-parameter (K2P).
FIGURE 1. Neighbor-joining tree derived from mitochondrial cytochrome oxidase 1 in Identification of early life-history stages of Caribbean Apogon (Perciformes: Apogonidae) through DNA Barcoding
FIGURE 1. Neighbor-joining tree derived from mitochondrial cytochrome oxidase 1 sequences showing genetic lineages of Apogon species from Bahamas (BAH), Belize (BLZ), Curaçao (CUR), Florida (FCC, FWRI, SMS), and Saba Bank (SAB). L = larva, J = juvenile, A = adult.
Figure 2. Haplotype median joining network estimated from dataset 1, comprising 76 in Phylogeography and evolutionary lineage diversity in the small-eared greater galago, Otolemur garnettii (Primates: Galagidae)
Figure 2. Haplotype median joining network estimated from dataset 1, comprising 76 samples of partial cytochrome b (402 bp).
Data from: Joining up the scattered anticancer knowledge on auraptene and umbelliprenin: A meta-analysis
<p>Auraptene (AUR) and umbelliprenin (UMB) are naturally occurring prenylated coumarins that have demonstrated promising anticancer effects across various human cancer cell lines. This meta-analysis aimed to systematically assess, compare, and quantify the anticancer efficacy of AUR and UMB by synthesizing evidence from in vitro studies. A comprehensive literature search identified 27 eligible studies investigating AUR or UMB against cancer cells. Mixed-effects models revealed significant negative associations between coumarin dose and viability for AUR (est. = − 2.27) and UMB (est. = − 3.990), underscoring their dose-dependent cytotoxicity. Meta-regression indicated slightly higher potency for UMB over AUR, potentially due to increased lipophilicity imparted by additional isoprenyl units. Machine learning approaches identified coumarin dose and cancer type as the most influential determinants of toxicity, while treatment duration and the specific coumarin displayed weaker effects. Moderate (AUR) to substantial (UMB) between-study heterogeneity was detected, although the findings proved robust. In summary, this meta-analysis establishes AUR and UMB as promising natural anticancer candidates with clear dose-toxicity relationships across diverse malignancies. The structural insights and quantifications of anticancer efficacy can inform forthcoming efforts assessing therapeutic potential in pre-clinical models and human trials.</p>
Packaging and Disseminating the JOIN for ME Program in Low-Income Settings
ClinicalTrials.gov study NCT04647760. IPD Sharing: YES. Countries: 1. Publications: 2.
Data from: Subordinate females in the cooperatively breeding Seychelles warbler obtain direct benefits by joining unrelated groups
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Data from: Joining up the scattered anticancer knowledge on auraptene and umbelliprenin: A meta-analysis
Open the record for dataset details and reuse information.
Data from: Multiple habitat use by declining migratory birds necessitates joined-up conservation
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Phoenix Area Social Survey: 2006 and 2011 Joined Dataset
The Phoenix Area Social Survey (PASS) is a longitudinal initiative funded by the National Science Foundation through the Central Arizona–Phoenix Long-Term Ecological Research (CAP LTER) program at Arizona State University. In 2006 and 2011, the PASS research team surveyed residential addresses in selected neighborhoods in the metropolitan Phoenix area to better understand perceptions, values, and behaviors regarding several key environmental issues, including water conservation, urban growth, air pollution, land conservation, biodiversity and urban climate change. To facilitate longitudinal analysis, PASS researchers have joined the 2006 and 2011 PASS datasets across questions common to both surveys. The resulting codebook (see link to codebook and report below) provides details on each question in the 2006 and 2011 joined dataset and methodological information. Since the PASS was originally designed to focus on neighborhood-level changes over time, the survey strategy followed residential addresses over time, not individual respondents. The PASS 2006 and 2011 joined dataset captures the 365 residential addresses that were surveyed during both years. A sub-set of this dataset is the 196 individuals who responded to the PASS in 2006 and 2011. Researchers interested in comparing responses from the same respondent over time can do so by using the Screen2006A question in the 2011 survey to create this data sub-set.
Data from: Joined at the hip: linked characters and the problem of missing data in studies of disparity
Paleontological investigations into morphological diversity, or disparity, are often confronted with large amounts of missing data. We illustrate how missing discrete data effects disparity using a novel simulation for removing data based on parameters from published datasets that contain both extinct and extant taxa. We develop an algorithm that assesses the distribution of missing characters in extinct taxa, and simulates data loss by applying that distribution to extant taxa. We term this technique 'linkage'. We compare differences in disparity metrics and ordination spaces produced by linkage and random character removal. When we incorporated linkage among characters, disparity metrics declined and ordination spaces shrank at a slower rate with increasing missing data, indicating that correlations among characters govern the sensitivity of disparity analysis. We also present and test a new disparity method that uses the linkage algorithm to correct for the bias caused by missing data. We equalized proportions of missing data among time bins before calculating disparity, and found that estimates of disparity changed when missing data were taken into account. By removing the bias of missing data, we can gain new insights into the morphological evolution of organisms and highlight the detrimental effects of missing data on disparity analysis.
FIGURE 5. Neighbour Joining tree obtained from the 505 in On the identity of Isoperla curtata (Plecoptera: Perlodidae): behavioural and molecular approaches show the existence of two separate species
FIGURE 5. Neighbour Joining tree obtained from the 505 bp COI fragment for studied populations.
Figure 1. Neighbour-joining consensus tree inferred from the 16S in A new species of Arenallianassa (Decapoda: Axiidea: Callianassidae) from hydrothermal vents with notes on its ecology and a redescription of Arenallianassa arenosa (Poore, 1975)
Figure 1. Neighbour-joining consensus tree inferred from the 16S rRNA gene sequences for eight species of Callianassidae. Genbank Accession numbers are appended. Consensus support (%) based on 1000 bootstrap replicates is shown for each node. Scale indicates patristic distances.
Fig. 3. A neighbor-joining phylogenetic tree reconstructed from a in Report of two unrecorded yeast species in the class Tremellomycetes
Fig. 3. A neighbor-joining phylogenetic tree reconstructed from a comparative analysis of 26S rRNA gene sequences showing the relationships of strain DJ2-14-10C with closely related species. Bootstrap values (>70%) based on neighbor-joining methods are shown at the branch nodes. Bar, 0.01 substitutions per nucleotide position (Trees, 1987).
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.