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zenodo48/100

Dataset to manuscript: Soil organic carbon stocks and quality in small-scale tropical, sub-humid and semi-arid watersheds under shrubland and dry deciduous forest in southwestern India

<p>Raw data to the manuscript entitled&nbsp;&quot;Soil organic carbon stocks and quality in small-scale tropical, sub-humid and semi-arid watersheds under shrubland and dry deciduous forest in southwestern India&quot; by Severin-Luca Bell&egrave;, Jean Riotte, Muddu Sekhar, Laurent Ruiz, Marcus Schiedung&nbsp;and Samuel Abiven.</p> <p>Data files include all raw data of soil cores (20211111_Raw_data.zip), data measured on composited samples (20211111_Composite_data.zip) and&nbsp;DRIFT spectra (20211111_DRIFT_data.zip).</p> <p>Files ending with var_names are the README files.</p>

opencc-by-4.0Nov 2021View details →
zenodo48/100

Data to support the publication "Soil Water Retention as Affected by Management Induced Changes of Soil Organic Carbon: Analysis of Long-Term Experiments in Europe", https://doi.org/10.3390/land10121362

<p>Soil organic carbon content and water content at the different pressure points, as measured by Ioanna Panagea for&nbsp;&nbsp;the publication&nbsp;&quot;Soil Water Retention as Affected by Management Induced Changes of Soil Organic Carbon: Analysis of Long-Term Experiments in Europe&quot;, &nbsp;https://doi.org/10.3390/land10121362 from the&nbsp;the long term experiments&nbsp; belonging in some of the SoilCare project partners.&nbsp;</p>

opencc-by-4.0Dec 2021View details →
zenodo48/100

Dataset supporting the paper "Doublet-Singlet-Doublet Transition in a Single Organic Molecule Magnet On-Surface Constructed with up to 3 Aluminum Atoms. Nano Letters 21, 8317 (2021)"

<p>Dataset corresponding to theoretical calculations in the paper &quot;Doublet-Singlet-Doublet Transition in a Single Organic Molecule Magnet On-Surface Constructed with up to 3 Aluminum Atoms&quot; Nano Letters 21, 8317 (2021), <a href="https://doi.org/10.1021/acs.nanolett.1c02881">https://doi.org/10.1021/acs.nanolett.1c02881</a></p> <p>List of files:</p> <p>Several folders corresponding to the figures of the paper. They contain:</p> <ul> <li>.siesta files: STM images in WsXM format (http://www.wsxm.eu/) simulated using STMpw (<a href="https://doi.org/10.5281/zenodo.3581159">https://doi.org/10.5281/zenodo.3581159</a>).</li> <li>CONTCAR and POSCAR files: relaxed structures in VASP format. They can be visualized with VESTA (<a href="https://jp-minerals.org/vesta/en/">https://jp-minerals.org/vesta/en/</a>).</li> <li>.agr: grace files (<a href="https://plasma-gate.weizmann.ac.il/Grace/">https://plasma-gate.weizmann.ac.il/Grace/</a>).<br> &nbsp;</li> </ul>

opencc-by-4.0Mar 2022View details →
zenodo48/100

Seafloor organic carbon flux output from the NEMO-MEDUSA model

<p>This output was produced by a simulation using a coupled ocean physics and marine biogeochemistry model. The physical ocean submodel was the Nucleus for European Modeling of the Ocean (NEMO) physical ocean model (Madec, 2014), run here in a global 1/12-degree resolution configuration (ORCA0083). The marine biogeochemistry submodel was the Model of Ecosystem Dynamics, nutrient Utilisation, Sequestration and Acidification (MEDUSA-2), an intermediate-complexity plankton ecosystem model (Yool et al., 2013). The horizontal resolution of this configuration of NEMO has non-uniform grid cells ranging 2 to 9 km in size (mean 7.5 km), with 75 vertical depth levels (31 levels between the surface and 200 m depth). Sea-ice is represented in the model by the Louvian‐la‐Neuve Ice Model (LIM2) (Fichefet, &amp; Maqueda, M. a. M., 1997; Goosse &amp; Fichefet, 1999). The configuration was forced at the air-sea interface with version 5.2 of the DRAKKAR forcing set (DFS) (Brodeau et al., 2010). DFS 5.2 is based on ERA40 reanalysis data, comprising of 6‐hourly means for wind, humidity, and atmospheric temperature, daily means for radiative fluxes (both longwave and shortwave), and monthly means for precipitation. A monthly climatology was used for river runoff, taken from the CORE2 reanalysis (Brodeau et al., 2010; Timmermann et al., 2005). The resulting model hindcast was created using this forcing set for the period 1958&ndash;2015, with marine biogeochemistry initialised in 1990.</p> <p>This archive includes the flux of organic carbon reaching the seafloor and the area of the grid cells for the global domain. In MEDUSA, the seafloor flux is the sum of slow- and fast-sinking detrital particles that reach the base of the water column and enter the benthic submodel of MEDUSA. In general, away from shallow water regions (&lt; 200 m), this flux is dominated by fast-sinking material produced by ecological processes associated with the large components of MEDUSA.</p> <p>The specific subset of output used was drawn from the decadal period 2006-2015, and was regridded from the non-uniform ORCA0083 grid to a regular 1/12-degree grid. Output processing was undertaken by A. Yool (axy@noc.ac.uk; National Oceanography Centre, Southampton UK).</p> <p>In addition to the netCDF files, text file dumps of their contents are included to assist with interpretation.</p> <p>References:</p> <p>Brodeau, L., Barnier, B., Treguier, A.‐M., Penduff, T., &amp; Gulev, S. (2010). An ERA40‐based atmospheric forcing for global ocean circulation models. Ocean Modelling, 31, 88&ndash;104.</p> <p>Fichefet, T., &amp; Maqueda, M. a. M. (1997). Sensitivity of a global sea ice model to the treatment of ice thermodynamics and dynamics. Journal of Geophysical Research, Oceans, 102, 12,609&ndash;12,646.</p> <p>Goosse, H., &amp; Fichefet, T. (1999). Importance of ice‐ocean interactions for the global ocean circulation: A model study. Journal of Geophysical Research, Oceans, 104, 23,337&ndash;23,355.</p> <p>Kelly, S., Popova, E., Aksenov, Y., Marsh, R., &amp; Yool, A. (2018). Lagrangian modeling of Arctic Ocean circulation pathways: Impact of advection on spread of pollutants. J. Geophys. Res. Oceans, 123, 2882‐2902, doi: 10.1002/2017JC013460.</p> <p>Madec, G. (2014). &quot;NEMO Ocean engine&quot; (draft edition r5171) &quot;NEMO Ocean engine&quot; (draft edition r5171). Note du P&ocirc;le de mod&eacute;lisation, Institut Pierre‐Simon Laplace (IPSL), France, 27, 1288&ndash;1619.</p> <p>Timmermann, R., Goosse, H., Madec, G., Fichefet, T., Ethe, C., &amp; Duli&egrave;re, V. (2005). On the representation of high latitude processes in the ORCA‐LIM global coupled sea ice&ndash;ocean model. Ocean Modelling, 8, 175&ndash;201.</p> <p>Yool, A., Popova, E.E. and Anderson, T.R. (2013).&nbsp; MEDUSA-2.0: an intermediate complexity biogeochemical model of the marine carbon cycle for climate change and ocean acidification studies.&nbsp; Geoscientific Model Development 6, 1767-1811, doi: 10.5194/gmd-6-1767-2013.</p>

opencc-by-4.0May 2022View details →
zenodo48/100

Soil organic carbon content [g/kg] for continental Europe at 30 m spatial resolution for period 2000-2020: Open Soil Data Cube for Europe

<p>Predictions are based on the 3D Ensemble Machine Learning framework, as implemented in the R environment for statistical computing (Hengl &amp; MacMillan, 2019; Hengl, et al., 2021). For each pixel we provide prediction errors as 1 standard deviation in either log or the original variable scale.</p> <p>The short description of currently available soil properties: log organic carbon [g/kg] to back-transform use exp(x/10)-1;</p> <p>Soil properties were predicted at fixed depths:</p> <p>&nbsp;&nbsp;&nbsp; Surface soil = s0..0cm,<br> &nbsp;&nbsp;&nbsp; Subsoil 1 = s30..30cm,<br> &nbsp;&nbsp;&nbsp; Subsoil 2 = s60..60cm,<br> &nbsp;&nbsp;&nbsp; Subsoil 3 = s100..100cm.</p> <p>To produce estimates for depth intervals e.g. 0&ndash;30 cm, 0&ndash;100 cm best use the trapezoidal rule formula.</p> <p>Periods: 2000 (2000&ndash;2003), 2004 (2004&ndash;2007), 2008 (2008&ndash;2011), 2012 (2012&ndash;2015), 2016 (2016&ndash;2019), 2020;</p> <p>To back-transform the log.oc maps use formula: exp(x/10)-1. These are examples of back-transformed values:</p> <p>&nbsp;&nbsp;&nbsp; log.oc = 15 &rarr; 0.3% SOC;<br> &nbsp;&nbsp;&nbsp; log.oc = 20 &rarr; 0.6% SOC;<br> &nbsp;&nbsp;&nbsp; log.oc = 25 &rarr; 1.1% SOC;<br> &nbsp;&nbsp;&nbsp; log.oc = 30 &rarr; 1.9% SOC;<br> &nbsp;&nbsp;&nbsp; log.oc = 35 &rarr; 3.2% SOC;<br> &nbsp;&nbsp;&nbsp; log.oc = 40 &rarr; 5.3% SOC;<br> &nbsp;&nbsp;&nbsp; log.oc = 50 &rarr; 14.8% SOC;</p>

opencc-by-sa-4.0May 2022View details →
zenodo48/100

MOdern River archivEs of Particulate Organic Carbon: MOREPOC

<p>Modern River Archives of Particulate Organic Carbon (MOREPOC) version 1.1 is&nbsp;a new, open-access, georeferenced, global database, featuring data on POC in suspended particulate matter (SPM) collected at 233 locations across 121 major river systems. This database includes 3,546 SPM data entries, among which 3,053 with POC content, 3,402 with stable carbon isotope (&delta;<sup>13</sup>C) values, 2,283 with radiocarbon activity (&Delta;<sup>14</sup>C) values, 1,936 with total nitrogen content, and 299 with aluminum-to-silicon mass ratios (Al/Si). The MOREPOC database aims at being used by the Earth System community to build comprehensive and quantitative models for the mobilization, alteration, and fate of terrestrial POC.</p> <p>The supply of particulate organic carbon (POC) associated with terrigenous solids transported to the ocean by rivers plays a significant role in the global carbon cycle. To advance our understanding of the source, transport, and fate of fluvial POC from regional to global scales, databases of riverine POC are needed, including elemental and isotope composition data from contrasted river basins in terms of geomorphology, lithology, climate, and anthropogenic pressure.&nbsp;MOREPOC will benefit the scientific community carrying out research on riverine POC sources, transport, and fate, furthermore, helping inform and validate Earth system models to improve the ability to model and understand the global carbon cycle.&nbsp;Existing environmental raster global datasets for climate, geomorphology, lithology, tectonics, hydrology, and land use, also offer promising prospects for the use of MOREPOC for identifying the controls on POC fluxes and composition, in particular using advanced statistical analysis or machine learning techniques. Moreover, MOREPOC enables a better understanding of sources, transport, and fate of fluvial POC combined with some existing ocean sediment databases. Future updates of MOREPOC should include new bulk POC parameters as well as data on molecular fractions, thermal labile fractions, or specific components such as black carbon or fossil carbon, which should, in turn, provide additional insight into the alteration of riverine POC from source to sink, an essential feature of the global carbon cycle.</p> <p><strong>Data description</strong></p> <p>The MOREPOC database consists of two parts: 1) the master metadata (MOREPOC_v1.1); 2) the summarization of references and methods (MOREPOC_v1.1_RM). A Readme is provided to better understand all parameters provided in&nbsp;the MOREPOC v1.1 database.&nbsp;</p> <p>MOREPOC_v1.1 includes one table, avaible as Excel spreadsheet (.xslx), comma-limited table (.csv), and GIS shapefile (compiled in .rar) using WGS84 coordinate system.</p> <ul> <li>MOREPOC_v1.1.xlsx</li> <li>MOREPOC_v1.1.csv</li> <li>MOREPOC_v1.1.rar (GIS shapefile)</li> </ul> <p>MOREPOC_v1.1_RM only provides one table,&nbsp;avaible as Excel spreadsheet (.xslx), comma-limited table (.csv).</p> <ul> <li>MOREPOC_v1.1_RM.xlsx</li> <li>MOREPOC_v1.1_RM.csv</li> </ul> <p>The database structure of MOREPOC is listed in Table.1 to understand all provided parameters, more information can be found in the companion manuscript.</p> <table> <caption><strong>Table. 1 Description of the parameters of the MOREPOC v1.1 database.</strong></caption> <tbody> <tr> <td><strong>Parameter</strong></td> <td><strong>Description</strong></td> <td><strong>MOREPOC column name</strong></td> </tr> <tr> <td>River name</td> <td>Name of the major river basin</td> <td>bas_id</td> </tr> <tr> <td>Sub river name</td> <td>Name of the sampled river/stream</td> <td>riv_id</td> </tr> <tr> <td>Country</td> <td>Name of country or places</td> <td>country</td> </tr> <tr> <td>Continent</td> <td>Name of the continent</td> <td>cont</td> </tr> <tr> <td>Sampling site/code</td> <td>Expedition sampling ID</td> <td>code</td> </tr> <tr> <td>Sampling date</td> <td>Time (month/day/year) when the SPM sample was collected</td> <td>time_m/d/y</td> </tr> <tr> <td>Latitude</td> <td>Decimal latitude using WGS 1984</td> <td>lat</td> </tr> <tr> <td>Longitude</td> <td>Decimal longitude using WGS 1984</td> <td>lon</td> </tr> <tr> <td>Sampling technique</td> <td>Method of SPM sampling</td> <td>type_spm</td> </tr> <tr> <td>Size fraction of SPM</td> <td>Reported size fractions analyzed</td> <td>fra_spm</td> </tr> <tr> <td>SPM concentration (mg/L)</td> <td>The total dry weight of SPM in mg per liter water column</td> <td>conc_spm</td> </tr> <tr> <td>POC concentration (mg/L)</td> <td>The total dry weight of POC in mg per liter water column</td> <td>conc_poc</td> </tr> <tr> <td>POC content (%)</td> <td>The total POC content of SPM in wt %</td> <td>per_poc</td> </tr> <tr> <td>POC content uncertainty (1&sigma;)</td> <td>The analytical uncertainty for POC content (1&sigma;)</td> <td>perc_poc_1sd</td> </tr> <tr> <td>&delta;<sup>13</sup>C (&permil;)</td> <td>&delta;<sup>13</sup>C values of POC (carbonate removed) in &permil;</td> <td>d13C_poc</td> </tr> <tr> <td>&delta;<sup>13</sup>C uncertainty (1&sigma;)</td> <td>The analytical uncertainty for &delta;<sup>13</sup>C of POC</td> <td>d13C_1sd</td> </tr> <tr> <td>&Delta;<sup>14</sup>C (&permil;)</td> <td>&Delta;<sup>14</sup>C values of POC (carbonate removed) in &permil;</td> <td>D14C_poc</td> </tr> <tr> <td>&Delta;<sup>14</sup>C uncertainty (1&sigma;)</td> <td>The analytical uncertainty for &Delta;<sup>14</sup>C of POC</td> <td>D14C_1sd</td> </tr> <tr> <td>Fraction modern (Fm)</td> <td>Fraction modern of POC</td> <td>F14C</td> </tr> <tr> <td>Radiocarbon ages (year)</td> <td>Radiocarbon ages before present (1950)</td> <td>age_14C</td> </tr> <tr> <td>TN content (%)</td> <td>The total nitrogen content of SPM in wt %</td> <td>perc_tn</td> </tr> <tr> <td>C<sub>org</sub>/N mass ratio</td> <td>Mass ratio of POC to TN in SPM</td> <td>cn_ratio</td> </tr> <tr> <td>Al/Si mass ratio</td> <td>Mass ratio of Al to Si in SPM</td> <td>alsi_ratio</td> </tr> <tr> <td>Reference</td> <td>Full list of citations of the data source</td> <td>ref</td> </tr> <tr> <td>Complete reference</td> <td>Complete information for cited references</td> <td>ref_c</td> </tr> <tr> <td>Measured parameters</td> <td>Summarization of elemental and isotopic carbon parameters measured</td> <td>para_m</td> </tr> <tr> <td>Calculated parameters</td> <td>Summarization of elemental and isotopic carbon parameters calculated</td> <td>para_c</td> </tr> <tr> <td>Filter</td> <td>Filter used to obtain SPM</td> <td>filter</td> </tr> <tr> <td>Acid</td> <td>The acid type used to remove carbonate in SPM</td> <td>acid</td> </tr> <tr> <td>Carbonate removal method</td> <td>The method used to remove carbonate in SPM</td> <td>m_acid</td> </tr> <tr> <td>Acid concentration</td> <td>The concentration of adopted acid to remove carbonate in SPM</td> <td>conc_acid</td> </tr> <tr> <td>carbonate removal temperature</td> <td>The environmental temperature for acid to remove carbonate in SPM</td> <td>temp_acid</td> </tr> <tr> <td>Carbonate removal duration</td> <td>The reaction time used for acid to remove carbonate in SPM</td> <td>time_acid</td> </tr> <tr> <td>Note</td> <td>Additional information for carbonate removal process</td> <td>note</td> </tr> </tbody> </table> <p><strong>Contributing Data</strong></p> <p>Please contact Yutian Ke at&nbsp;<a href="mailto:yutianke@caltech.edu">yutianke@caltech.edu</a>&nbsp;or &nbsp;<a href="mailto:yutian.ke@universite-paris-saclay.fr">yutian.ke@universite-paris-saclay.fr</a>&nbsp;if you are interested in contributing your published or unpublished data to MOREPOC.</p> <p><strong>Citation</strong></p> <p>Ke, Y. T., Calmels, D., Bouchez, J., C&eacute;cile, Q.: MOdern River archivEs of Particulate Organic Carbon: MOREPOC, Dataset version 1.1, Zenodo [dataset], <a href="https://doi.org/10.5281/zenodo.6541925">https://doi.org/10.5281/zenodo.7055970</a>.</p>

opencc-by-4.0May 2022View details →
zenodo48/100

Soil Organic Carbon Content estimations over the Lithuanian pilot area (2022)

<p>In the context of the EU-funded project DIONE (No. 870378), Soil Organic Carbon Content (SOC) estimations have been released as outputs of novel machine learning algorithms which combined the point measurements (i.e. soil properties detected by the Soil Scanning Systems) with temporal EO multispectral imagery and other ancillary variables, enabling end-users, and for the DIONE case, the national paying agency of Lithuania (National Paying Agency - NPA) to mine meaningful information about overall soil health and the effects applied agricultural practices.<br> The dataset is delivered in a single-banded GeoTIFF file (DIONE_SOC_estimations_LT_2022.tif- EPSG:4326) containing the SOC content (SOC %) labelled as Band 1.</p>

opencc-by-4.0Oct 2022View details →
zenodo48/100

Soil Organic Carbon Content estimations over the Cypriot pilot area (2022)

<p>In the context of the EU-funded project DIONE (No. 870378), Soil Organic Carbon Content (SOC) estimations have been released as outputs of novel machine learning algorithms which combined the point measurements (i.e. soil properties detected by the Soil Scanning Systems) with temporal EO multispectral imagery and other ancillary variables, enabling end-users, and for the DIONE case, the national paying agency of Cyprus (Cyprus Agricultural Payments Organisation - CAPO) to mine meaningful information about overall soil health and the effects applied agricultural practices.<br> The dataset is delivered in a single-banded GeoTIFF file (DIONE_SOC_estimations_CY_2022.tif- EPSG:4326) containing the SOC content (SOC %) labelled as Band 1.<br> &nbsp;</p>

opencc-by-4.0Oct 2022View details →
zenodo48/100

Organic micropollutants and heavy metals in stormwater runoff of five different catchment types in Berlin (Germany)

<p>This dataset includes concentrations of micropollutants (67), heavy metals (8) and standard parameters (9) for stormwater runoff taken from separated sewers of five catchments between 3 and 37 ha in Berlin (Germany). It also includes rain data of analyzed events as separate file. Samples were taken as part of the OgRe research project of Kompetenzzentrum Wasser Berlin (<a href="https://www.kompetenz-wasser.de/en/project/ogre/">www.kompetenz-wasser.de/en/project/ogre/</a>) in 2014 and 2015. Sampling and analytical methods are detailed in &quot;Concentrations of micropollutants in urban stormwater runoff of different land uses&quot; (<a href="https://doi.org/10.3390/w13091312">https://doi.org/10.3390/w13091312</a>). A dataset with concentrations of the urban stream Panke in Berlin during dry and wet weather (samples were taken as part of the same project) is available separately (<a href="https://zenodo.org/record/4633779">https://zenodo.org/record/4633779</a>).</p> <p><strong>Description of fields (concentrations):</strong></p> <ul> <li><strong>SampleID</strong>: unique sample identifier</li> <li><strong>SiteID</strong>: unique site identifier (catchment type) <ul> <li>&nbsp;1 - OLD: area with typical five-storey perimeter blocks built between 1870 and 1930 (31 ha)</li> <li>&nbsp;2 - NEW: newer area of 4-8-storey concrete slab buildings built between 1960 and 1980 (16 ha)</li> <li>&nbsp;3 - STR: 1.3 km of a busy streeat with intersection with traffic lights and bus stops (3 ha)</li> <li>&nbsp;4 - OFH: a residential area characterized by one-family houses and villas with gardens (17 ha)</li> <li>&nbsp;5 - COM: a commercial and industrial area of high imperviousness with large flat-roof buildings and yards (37 ha)</li> <li>&nbsp;6 - PNK: urban stream Panke (characterized by strong stormwater inputs from separate sewer discharges - available in separate dataset)</li> </ul> </li> <li><strong>LocalDateTime</strong>: start time of sampling (local)</li> <li><strong>DateTimeUTC</strong>: start time of sampling (UTC)</li> <li><strong>UTCOffset</strong>: UTC offset to local time in h</li> <li><strong>SampleType</strong>: either &quot;composite&quot; for volume proportional composite sample (all samples from storm sewers) or &quot;single&quot; for grab sample (all stream samples, separate dataset)</li> <li><strong>VariableName</strong>: name of analysed substance/parameter</li> <li><strong>UnitsAbbreviation</strong>: either &quot;ug/L&quot; (microgram per litre) or &quot;mg/L&quot; (milligram per litre)</li> <li><strong>CensorCode</strong>: either &quot;lt&quot; (less than) for concentration below detection limit (value is detection limit) or &quot;nc&quot; (not censored) for concentration above detection limit</li> <li><strong>DataValue</strong>: measured value (if censor code is lt, value indicates detection limit)</li> </ul> <p><strong>Description of fields (rain data):</strong></p> <ul> <li><strong>SampleID</strong>: sample identifier of matching sample (see above)</li> <li><strong>SiteID and SiteName</strong>: unique site identifier and name (catchment type) (see above)</li> <li><strong>tBeg_rain, tEnd_rain</strong>: begin and end of rain event in local time</li> <li><strong>depth.mm</strong>: rain depth of rain event in mm</li> <li><strong>duration_rain.h</strong>: duration of rain event in h</li> <li><strong>intensity_max_10min.mm_h</strong>: maximum rain intensitity of rain event in 10-min interval in mm/h</li> <li><strong>intensity_mean_event.mm_h</strong>: mean rain intensitity of rain event in mm/h</li> <li><strong>ADD.d</strong>: number of antecedent dry days in days</li> </ul> <p>Rain data was collected by rain gauge network of Berlin waterworks (&gt;40 gauges) &mdash; gauge with best correlation between rain depth and event volume in storm sewer was chosen (distances to monitoring sites: 2&ndash;6 km).</p> <p>Two data files are provided in comma separated format:</p> <ul> <li>&quot;OgRe_drain.csv&quot; contains concentrations of all stormwater runoff samples taken in separate storm sewers</li> <li>&quot;OgRe_rain.csv&quot; contains rain data for all stormwater runoff samples</li> </ul>

opencc-by-4.0Mar 2021View details →
zenodo48/100

Soil Organic Carbon Content estimations over the Cypriot pilot area (2021)

<p>In the context of the EU-funded project DIONE (No. 870378), Soil Organic Carbon Content (SOC) estimations have been released as outputs of novel machine learning algorithms which combined the point measurements (i.e. soil properties detected by the Soil Scanning Systems) with temporal EO multispectral imagery and other ancillary variables, enabling end-users, and for the DIONE case, the national paying agency of Cyprus (Cyprus Agricultural Payments Organisation - CAPO) to mine meaningful information about overall soil health and the effects applied agricultural practices at a parcel level.</p> <p>The dataset is delivered in a shapefile format (DIONE_SOC_estimations_CY_2021.shp - EPSG: 4326) containing the SOC content (SOC %) labeled as SOC.</p>

opencc-by-4.0Oct 2022View details →
zenodo48/100

Soil Organic Carbon Content estimations over the Lithuanian pilot area (2021)

<p>In the context of the EU-funded project DIONE (No. 870378), Soil Organic Carbon Content (SOC) estimations have been released as outputs of novel machine learning algorithms which combined the point measurements (i.e. soil properties detected by the Soil Scanning Systems) with temporal EO multispectral imagery and other ancillary variables, enabling end-users, and for the DIONE case, the national paying agency of Lithuania (National Paying Agency - NPA) to mine meaningful information about overall soil health and the effects applied agricultural practices at a parcel level.</p> <p>The dataset is delivered in a shapefile format (DIONE_SOC_estimations_LT_2021.shp - EPSG:3346) containing the SOC content (SOC %) labeled as SOC.</p>

opencc-by-4.0Oct 2022View details →
zenodo48/100

Marine plastics alter the organic matter composition of the air-sea boundary layer, with influences on CO2 exchange: a large-scale analysis method to explore future ocean scenarios

<p>Microplastics are substrates for microbial activity and can influence biomass production. This has potentially important implications in the sea-surface microlayer, the marine boundary layer that controls gas exchange with the atmosphere and where biologically produced organic compounds can accumulate. In the present study, we used six large scale mesocosms to simulate future ocean scenarios of high plastic concentration. Each mesocosm was filled with 3 m3&nbsp;of seawater from the oligotrophic Sea of Crete, in the Eastern Mediterranean Sea. A known amount of standard polystyrene microbeads of 30 &mu;m diameter was added to three replicate mesocosms, while maintaining the remaining three as plastic-free controls. Over the course of a 12-day experiment, we explored microbial organic matter dynamics in the sea-surface microlayer in the presence and absence of microplastic contamination of the underlying water. Our study shows that microplastics increased both biomass production and enrichment of carbohydrate-like and proteinaceous marine gel compounds in the sea-surface microlayer. Importantly, this resulted in a 3 % reduction in the concentration of dissolved CO2&nbsp;in the underlying water. This reduction was associated to both direct and indirect impacts of microplastic pollution on the uptake of CO2&nbsp;within the marine carbon cycle, by modifying the biogenic composition of the sea&#39;s boundary layer with the atmosphere.</p>

opencc-by-4.0Oct 2022View details →
zenodo48/100

Mixed ionic-electronic conduction in Ruddlesden-Popper and Dion-Jacobson layered hybrid perovskites with aromatic organic spacers

<p>Characterisation dataset for&nbsp;&ldquo;Mixed ionic-electronic conduction in Ruddlesden-Popper and Dion-Jacobson layered hybrid perovskites with aromatic organic spacers&rdquo;, DOI:10.1039/d4tc01010h. Data provided as *.xlsx, *.csv, *tif and *.png files.</p> <p>&nbsp;</p> <p>&nbsp;</p> <p>&nbsp;</p>

opencc-by-4.0May 2024View details →
zenodo48/100

Organic Matter Database (OMD)

<p>Agricultural, fisheries, forestry and agro-processing activities produce large quantities of residues, by-products and waste materials every year. However, data on such residues and by-products are not readily available. We present a global organic matter database (OMD) of residues and by-products from agriculture, fisheries, forestry and related industries. The OMD is the first of its kind consolidating quantities of residues and by-products from agriculture, fisheries, forestry and allied industries globally. Residue datasets were estimated from the FAOSTAT and FishStatJ databases using prescribed equations and conversion factors.</p>

opencc-by-4.0Jul 2023View details →
zenodo48/100

Soil organic carbon content in x 5 g / kg at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution

<p>Soil organic carbon content in&nbsp;&times; 5 g / kg (to convert to % divide by 2) at 6 standard depths (0, 10, 30, 60, 100 and 200 cm) at 250 m resolution. The maps are provided using&nbsp;Byte type&nbsp;to significantly reduce file size.&nbsp;Predicted from a global compilation of soil points. Also available for download:&nbsp;soil organic stock maps in&nbsp;in kg / m<sup>2</sup>&nbsp;(<a href="https://doi.org/10.5281/zenodo.1475453">https://doi.org/10.5281/zenodo.1475453</a>) and bulk density maps in kg / m<sup>3</sup>&nbsp;(<a href="https://doi.org/10.5281/zenodo.1475970">https://doi.org/10.5281/zenodo.1475970</a>). Processing steps are described in detail <strong><a href="https://gitlab.com/openlandmap/global-layers/tree/master/soil">here</a></strong>. Antarctica is not included.</p> <p>To access and visualize maps use:&nbsp;&nbsp;<a href="http://www.openlandmap.org/">OpenLandMap.org</a></p> <p>If you discover a bug, artifact or inconsistency in the maps, or if you have a question please use some of the following channels:</p> <ul> <li>Technical issues and questions about the code:&nbsp;<a href="https://gitlab.com/openlandmap/global-layers/issues">https://gitlab.com/openlandmap/global-layers/issues</a>&nbsp;</li> <li>General questions and comments:&nbsp;<a href="https://disqus.com/home/forums/landgis/">https://disqus.com/home/forums/landgis/</a></li> </ul> <p>All files internally compressed using &quot;COMPRESS=DEFLATE&quot; creation&nbsp;option in GDAL. File naming convention:</p> <ul> <li>sol = theme: soil,</li> <li>organic.carbon = variable: soil organic carbon content in x 5 g / kg,</li> <li>usda.6a1c = determination method: laboratory method code,</li> <li>m = mean value,</li> <li>250m = spatial resolution / block support: 250 m,</li> <li>b10..10cm = vertical reference: 10 cm depth below surface,</li> <li>1950..2017 = time reference: period 1950&ndash;2017,</li> <li>v0.2 = version number: 0.2,</li> </ul>

opencc-by-sa-4.0Oct 2018View details →
zenodo48/100

Soil organic carbon stock (0–30 cm) in kg/m2 time-series 2001–2015 based on the land cover changes

<p>Estimated SOC loss based on the European Space Agency (ESA) Climate Change Initiative (ESACCI-LC) land cover maps 2001&ndash;2015. This only shows estimated SOC loss (in kg/m2) as a result of change in land use / land cover (assuming standard change factors based on the literature and IPCC reports). Methodology produced for the purpose of the&nbsp;Land Degradation Neutrality (UNCCD) project. Processing steps are described in detail <strong><a href="https://gitlab.com/openlandmap/global-layers/tree/master/soil/LDN">here</a></strong>. Antartica is not included.</p> <p>To access and visualize maps use:&nbsp;&nbsp;<a href="http://www.openlandmap.org/">OpenLandMap.org</a></p> <p>If you discover a bug, artifact or inconsistency in the maps, or if you have a question please use some of the following channels:</p> <ul> <li>Technical issues and questions about the code:&nbsp;<a href="https://gitlab.com/openlandmap/global-layers/issues">https://gitlab.com/openlandmap/global-layers/issues</a>&nbsp;</li> <li>General questions and comments:&nbsp;<a href="https://disqus.com/home/forums/landgis/">https://disqus.com/home/forums/landgis/</a></li> </ul> <p>All files internally compressed using &quot;COMPRESS=DEFLATE&quot; creation&nbsp;option in GDAL. File naming convention:</p> <ul> <li>sol = theme: soil,</li> <li>organic.carbon.stock = variable: soil organic carbon stock in kg/m2,</li> <li>msa.kgm2 = determination method: derived from carbon content, bulk density and coarse fragments,</li> <li>m = mean value,</li> <li>250m = spatial resolution / block support: 250 m,</li> <li>b0..30cm = vertical reference: standard layer 0-30 cm below surface,</li> <li>2014 = time reference: year 2014,</li> <li>v0.2 = version number: 0.2,</li> </ul>

opencc-by-sa-4.0Oct 2018View details →
zenodo48/100

Soil organic carbon stock in kg/m2 for 5 standard depth intervals (0–10, 10–30, 30–60, 60–100 and 100–200 cm) at 250 m resolution

<p>Soil organic carbon stock in kg/m<sup>2</sup> for 5 standard depth intervals (0&ndash;10, 10&ndash;30, 30&ndash;60, 60&ndash;100 and 100&ndash;200 cm) at 250 m resolution. To convert to t/ha multiply by 10.&nbsp;Derived using soil organic carbon content (<a href="https://doi.org/10.5281/zenodo.1475457">https://doi.org/10.5281/zenodo.1475457</a>), bulk density (<a href="https://doi.org/10.5281/zenodo.1475970">https://doi.org/10.5281/zenodo.1475970</a>) and coarse fragments (<a href="https://doi.org/10.5281/zenodo.2525681">https://doi.org/10.5281/zenodo.2525681</a>), predicted from point data at 6 standard depths. Depth to bed rock has been ignored, hence total stocks might be about 10&ndash;15% lower then reported.&nbsp;Processing steps are described in detail <strong><a href="https://gitlab.com/openlandmap/global-layers/tree/master/soil">here</a></strong>. Antarctica is not included.</p> <p>To access and visualize maps use:&nbsp;<a href="https://openlandmap.org"><strong>https://openlandmap.org</strong></a></p> <p>If you discover a bug, artifact or inconsistency in the maps, or if you have a question please use some of the following channels:</p> <ul> <li>Technical issues and questions about the code:&nbsp;<a href="https://gitlab.com/openlandmap/global-layers/issues">https://gitlab.com/openlandmap/global-layers/issues</a>&nbsp;</li> <li>General questions and comments:&nbsp;<a href="https://disqus.com/home/forums/landgis/">https://disqus.com/home/forums/landgis/</a></li> </ul> <p>All files internally compressed using &quot;COMPRESS=DEFLATE&quot; creation&nbsp;option in GDAL. File naming convention:</p> <ul> <li>sol = theme: soil,</li> <li>organic.carbon.stock = variable: soil organic carbon stock in kg/m2,</li> <li>msa.kgm2 = determination method: derived from organic carbon content, bulk density and coarse fragments,</li> <li>m = mean value,</li> <li>250m = spatial resolution / block support: 250 m,</li> <li>b0..10cm = vertical reference: 0-10 cm layer below surface,</li> <li>1950..2017 = time reference: period 1950-2017,</li> <li>v0.2 = version number: 0.2,</li> </ul>

opencc-by-sa-4.0Dec 2018View details →
zenodo48/100

S57 | GREEKPHARMA | Suspect Pharmaceuticals from the National Organization of Medicine, Greece

<p>This is the dataset associated with list S57 GREEKPHARMA on the NORMAN Suspect List Exchange:</p> <p><a href="https://www.norman-network.com/nds/SLE/">https://www.norman-network.com/nds/SLE/</a></p>

opencc-by-4.0Jun 2019View details →
zenodo48/100

Table S27: Target and identified unknown organic micropollutants detected in surface water samples taken during heavy rain events

<p>In the following table, peak intensities of detected organic micropollutants in water samples are displayed.</p> <p>This data table is part of the appendix of Chapter 4 of the PhD thesis &ldquo;Novel approaches to identify drivers of chemical stress in small rivers&rdquo; by Liza-Marie Beckers prepared at RWTH Aachen University and at the Helmholtz Centre for Environmental Research-UFZ. In Chapter 4, precipitation-related pollutant patterns and indicator compounds during heavy rain events were identified in the Holtemme River by nontarget screening and cluster analysis. The table contains peak heights of organic micropollutants detected in water samples taken during heavy rain events in the Holtemme River (Saxony &ndash; Anhalt, Germany). The table is structured into the following columns: Compound name, use class of compound (e.g., pharmaceutical or pesticide), distinction between target or identified unknown compounds, mass-to-charge ratio (m/z), retention time (RT), assignment to a pattern identified by cluster analysis (i.e., &ldquo;Base&rdquo; or &ldquo;Quick&rdquo;), the probability of belonging to the assigned pattern as number between 0 and 1 as well as the peak height of the compound in each sample. The samples are indicated by &quot;B&quot; for &quot;bottle&quot; and a number from 1-16. The use class &ldquo;NA&rdquo; indicates that now major use class for this compound could be identified.</p> <p>The sampling was triggered by combined sewer overflow at a wastewater treatment plant upstream of the sampling point. Samples were taken by an automated sampler in 30-min composite samples for 8 hours resulting in 16 samples per rain event. In total, 6 heavy rain events from May to September 2016 were sampled during this study. The table is divided into 6 subtables (i.e., Table S27 A-F). Each subtable displays compounds and their peak heights detected in samples from one heavy rain event. The different rain events are abbreviated by the sampling date:</p> <p>Table S27A displays results from the rain event samples May 29<sup>th</sup> 2016 : E2905</p> <p>Table S27B displays results from the rain event samples June 01<sup>st</sup> 2016 : E0106</p> <p>Table S27C displays results from the rain event samples June 24<sup>th</sup> 2016 : E1306</p> <p>Table S27D displays results from the rain event samples June 13<sup>th</sup> 2016 : E2406</p> <p>Table S27E displays results from the rain event samples July 13<sup>th</sup> 2016 : E1307</p> <p>Table S27F displays results from the rain event samples September 17<sup>th</sup> 2016 : E1709</p> <p>Chemical analysis of the water samples was performed by liquid chromatography (UltiMate 3000 LC system (Thermo Scientific)) coupled to high resolution mass spectrometry (Q Exactive Plus, Thermo Scientific) with a heated electrospray ionization (HESI) source. Nontarget screening was performed as it allows for a comprehensive characterization of the chemical exposure during heavy rain events. However, only annotated target compounds and unknown compounds identified by structure elucidation are presented in the table. Details on data evaluation methods are described in Chapter 4 of the PhD thesis.</p> <p>Beckers, L.M. (2019): Novel approaches to identify drivers of chemical stress in small rivers. RWTH Aachen University, Aachen.</p>

opencc-by-4.0Aug 2019View details →
zenodo48/100

Laboratory simulations of benzene oxidation and formation of highly oxygenated organic molecules (HOM)

<p>This dataset supplements the following manuscript:<br> Garmash, O., Rissanen, M. P., Pullinen, I., Schmitt, S., Kausiala, O., Tillmann, R., Percival, C., Bannan, T. J., Priestley, M., Hallquist, &Aring;. M., Kleist, E., Kiendler-Scharr, A., Hallquist, M., Berndt, T., McFiggans, G., Wildt, J., Mentel, T., and Ehn, M.: Multi-generation OH oxidation as a source for highly oxygenated organic molecules from aromatics, Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2019-582, in review, 2019.<br> It presents data from Table 1, Tables S1-S4 and Figures 5, A1 and A2, including model input data.</p>

opencc-by-4.0Nov 2019View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record