Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
218
datasets available to search
ShareScore release 0.9.0
Dataset results
218 results for “Pleosporales”
Figure 9 from: Hou L, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW (2020) Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys 65: 49-99. https://doi.org/10.3897/mycokeys.65.47704
Figure 9 Stagonosporopsis stuijvenbergii (CBS 144953). A, B Colony on OA (front and reverse) C, D colony on MEA (front and reverse) E, F colony on PDA (front and reverse) G pycnidia forming on OAH pycnidia I ostiole J–L conidiogenous cells M stromatic hyphal aggregations N conidia. Scale bars: 50 μm (H); 10 μm (I, M); 5 μm (J–L, N).
Figure 13 from: Hou L, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW (2020) Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys 65: 49-99. https://doi.org/10.3897/mycokeys.65.47704
Figure 13 Xenodidymella weymaniae (CBS 144960). A, B Colony on OA (front and reverse) C, D colony on MEA (front and reverse) E, F colony on PDA (front and reverse) G, H pycnidia forming on OAI, J section of pycnidial wall K–N conidiogenous cells O conidia. Scale bars: 50 μm (H); 20 μm (I); 10 μm (J); 5 μm (K–O).
Figure 10 from: Hou L, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW (2020) Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys 65: 49-99. https://doi.org/10.3897/mycokeys.65.47704
Figure 10 Stagonosporopsis weymaniae (CBS 144959). A, B Colony on OA (front and reverse) C, D colony on MEA (front and reverse) E, F colony on PDA (front and reverse) G–I pycnidia forming on OAJ, L conidiogenous cells K subglobose conidia M stromatic hyphal aggregations N chlamydospores O oblong conidia. Scale bars: 100 μm (I); 10 μm (J–N); 5 μm (O).
Figure 12 from: Hou L, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW (2020) Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys 65: 49-99. https://doi.org/10.3897/mycokeys.65.47704
Figure 12 Vandijckomycella snoekiae (CBS 144954). A, B Colony on OA (front and reverse) C, D colony on MEA (front and reverse) E, F colony on PDA (front and reverse) G, H pycnidia forming on OAI, J section of pycnidial wall K–N conidiogenous cells O conidia. Scale bars: 100 μm (H); 50 μm (I); 10 μm (J); 5 μm (K–O).
Figure 11 from: Hou L, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW (2020) Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys 65: 49-99. https://doi.org/10.3897/mycokeys.65.47704
Figure 11 Vandijckomycella joseae (CBS 143011). A, B Colony on OA (front and reverse) C, D colony on MEA (front and reverse) E, F colony on PDA (front and reverse) G, H pycnidia forming on OAI, J section of pycnidial wall K–N conidiogenous cells O conidia. Scale bars: 100 μm (H); 20 μm (I); 10 μm (J); 5 μm (K–O).
Figure 1 from: Hou L, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW (2020) Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys 65: 49-99. https://doi.org/10.3897/mycokeys.65.47704
Figure 1 Phylogenetic tree generated from the maximum-likelihood analysis based on the combined ITS, LSU, tub2 and rpb2 sequence alignment of Didymellaceae members. The RAxML bootstrap support values (BS), Bayesian posterior probabilities (PP), and parsimony bootstrap support values (PBS) are given at the nodes (BS/PP/PBS). BS and PBS values represent parsimony bootstrap support values >50 %. Full supported branches are indicated in bold. The scale bar represents the expected number of changes per site. Ex-type strains are represented in bold. Strains obtained in the current study are printed in green; among them, whilst strains that represent new taxa are printed in red. Some of the basal branches were shortened to facilitate layout (the fraction in round parentheses refers to the presented length compared to the actual length of the branch). The tree was rooted to Coniothyrium palmarum CBS 400.71 and Leptosphaeria doliolum CBS 505.75.
Figure 2 from: Hou L, Hernández-Restrepo M, Groenewald JZ, Cai L, Crous PW (2020) Citizen science project reveals high diversity in Didymellaceae (Pleosporales, Dothideomycetes). MycoKeys 65: 49-99. https://doi.org/10.3897/mycokeys.65.47704
Figure 2 Ascochyta benningiorum (CBS 144957). A, B Colony on OA (front and reverse) C, D colony on MEA (front and reverse) E, F colony on PDA (front and reverse) G pycnidia forming on OAH pycnidium I section of pycnidium J section of pycnidial wall K–M conidiogenous cells N conidia. Scale bars: 100 μm (H, I); 10 μm (J); 5 μm (K–N).
Figure 2 from: Samarakoon BC, Phookamsak R, Wanasinghe DN, Chomnunti P, Hyde KD, Mckenzie EHC, Promputtha I, Xu J-C, Li Y-J (2020) Taxonomy and phylogenetic appraisal of Spegazzinia musae sp. nov. and S. deightonii (Didymosphaeriaceae, Pleosporales) on Musaceae from Thailand. MycoKeys 70: 19-37. https://doi.org/10.3897/mycokeys.70.52043
Figure 2 Spegazzinia deightonii (MFLU 19-2908) a–c fungal colonies on host surface d conidiophore mother cell of α conidia e–g α conidia i a developmental stage of β conidia h, k conidia l colonies on PDA after 28 days showing sporulation j, m–p β conidia. Scale bars: 500μm (a), 200μm (b), 50 μm (c), 20μm (e–h), 10μm (d, k, m–p), 5 μm (i, j).
Figure 1 from: Samarakoon BC, Phookamsak R, Wanasinghe DN, Chomnunti P, Hyde KD, Mckenzie EHC, Promputtha I, Xu J-C, Li Y-J (2020) Taxonomy and phylogenetic appraisal of Spegazzinia musae sp. nov. and S. deightonii (Didymosphaeriaceae, Pleosporales) on Musaceae from Thailand. MycoKeys 70: 19-37. https://doi.org/10.3897/mycokeys.70.52043
Figure 1 Maximum likelihood tree revealed by RAxML from an analysis of SSU, LSU and ITS and TEF1-α sequence data of selected genera of family Didymosphaeriaceae, showing the phylogenetic position of Spegazzinia musae (MFLUCC 20-0001) and S. deightonii (MFLUCC 20-0002). ML bootstrap supports (≥60 %) and Bayesian posterior probabilities (≥ 0.95 BYPP) are given above in the branches, respectively. The tree was rooted with Pleospora herbarum and Stemphylium botryosum (Pleosporaceae). Strains generated in this study are indicated in red-bold. Ex-type species are indicated in bold. The scale bar represents the expected number of nucleotide substitutions per site. A best scoring RAxML tree is shown with a final ML optimization likelihood value of -13516.66. The matrix had 795 distinct alignment patterns, with 33.60% of undetermined characters or gaps. Estimated base frequencies were: A = 0.239862, C = 0.245185, G = 0.277025, T = 0.237927; substitution rates AC = 1.626982, AG = 2.468452, AT = 1.211822, CG = 1.092437, CT = 6.295657, GT = 1.000000; proportion of invariable sites I = 0.484119; gamma distribution shape parameter α = 0.445929.
Figure 3 from: Samarakoon BC, Phookamsak R, Wanasinghe DN, Chomnunti P, Hyde KD, Mckenzie EHC, Promputtha I, Xu J-C, Li Y-J (2020) Taxonomy and phylogenetic appraisal of Spegazzinia musae sp. nov. and S. deightonii (Didymosphaeriaceae, Pleosporales) on Musaceae from Thailand. MycoKeys 70: 19-37. https://doi.org/10.3897/mycokeys.70.52043
Figure 3 Spegazzinia musae (MFLU 19-2907, holotype) a–c fungal colonies on host surface d mature conidia e conidiophore of α conidia with the mother cell f, g α conidia h–q β conidia r colony on PDA after 28 days. Scale bars: 200 μm (a–c), 20 μm (d–g, j), 10 μm (h, i, k–q).
Figure 6 from: Tennakoon DS, Thambugala KM, Wanasinghe DN, Gentekaki E, Promputtha I, Kuo C-H, Hyde KD (2020) Additions to Phaeosphaeriaceae (Pleosporales): Elongaticollum gen. nov., Ophiosphaerella taiwanensis sp. nov., Phaeosphaeriopsis beaucarneae sp. nov. and a new host record of Neosetophoma poaceicola from Musaceae. MycoKeys 70: 59-88. https://doi.org/10.3897/mycokeys.70.53674
Figure 6 Neosetophoma poaceicola (MFLU 18–2597, new host record) a appearance of ascomata on host b close up of ascomata c vertical section through ascoma d peridium e pseudoparaphyses f–h asci i–k ascospores l germinated ascospore in PDAm colony from above n colony from below. Scale bars: 50 µm (c), 20 µm (d), 30 µm (e–h), 15 µm (i–l).
Figure 5 from: Tennakoon DS, Thambugala KM, Wanasinghe DN, Gentekaki E, Promputtha I, Kuo C-H, Hyde KD (2020) Additions to Phaeosphaeriaceae (Pleosporales): Elongaticollum gen. nov., Ophiosphaerella taiwanensis sp. nov., Phaeosphaeriopsis beaucarneae sp. nov. and a new host record of Neosetophoma poaceicola from Musaceae. MycoKeys 70: 59-88. https://doi.org/10.3897/mycokeys.70.53674
Figure 5 Phaeosphaeriopsis beaucarneae (MFLU 18-2586, paratype) a appearance of conidiomata on host b close up of conidiomata c vertical section through conidioma d conidiomatal wall e, f conidiogenous cells and developing conidia g–i conidia j germinated conidium in PDAk colony from above l colony from below. Scale bars: 100 µm (c), 20 µm (d), 3 µm (e, f), 5 µm (g–j).
Figure 4 from: Tennakoon DS, Thambugala KM, Wanasinghe DN, Gentekaki E, Promputtha I, Kuo C-H, Hyde KD (2020) Additions to Phaeosphaeriaceae (Pleosporales): Elongaticollum gen. nov., Ophiosphaerella taiwanensis sp. nov., Phaeosphaeriopsis beaucarneae sp. nov. and a new host record of Neosetophoma poaceicola from Musaceae. MycoKeys 70: 59-88. https://doi.org/10.3897/mycokeys.70.53674
Figure 4 Phaeosphaeriopsis beaucarneae (MFLU 18-2586, holotype) a appearance of ascomata on host b close up of ascoma c vertical section through ascoma d peridium e pseudoparaphyses f–i asci j–n ascospores o germinated ascospore in PDAp colony from above q colony from below. Scale bars: 100 µm (c), 15 µm (d), 50 µm (e–i), 10 µm (j–o).
Figure 2 from: Tennakoon DS, Thambugala KM, Wanasinghe DN, Gentekaki E, Promputtha I, Kuo C-H, Hyde KD (2020) Additions to Phaeosphaeriaceae (Pleosporales): Elongaticollum gen. nov., Ophiosphaerella taiwanensis sp. nov., Phaeosphaeriopsis beaucarneae sp. nov. and a new host record of Neosetophoma poaceicola from Musaceae. MycoKeys 70: 59-88. https://doi.org/10.3897/mycokeys.70.53674
Figure 2 Elongaticollum hedychii (MFLU 18-2542, holotype) a specimen b appearance of conidiomata on host c close up of conidiomata on host d vertical section through conidioma e, f squash mount of conidioma g conidioma wall h, i elongated conidiomatal necks j conidiogenous cells k conidia l, m germinated conidia n colony from below o colony from above p, q pycnidia formed on PDA. Scale bars: 100 µm (c), 50 µm (d–h), 10 µm (g), 30 µm (i), 3 µm (j–m), 100 µm (p, q).
Figure 1 from: Tennakoon DS, Thambugala KM, Wanasinghe DN, Gentekaki E, Promputtha I, Kuo C-H, Hyde KD (2020) Additions to Phaeosphaeriaceae (Pleosporales): Elongaticollum gen. nov., Ophiosphaerella taiwanensis sp. nov., Phaeosphaeriopsis beaucarneae sp. nov. and a new host record of Neosetophoma poaceicola from Musaceae. MycoKeys 70: 59-88. https://doi.org/10.3897/mycokeys.70.53674
Figure 1 RAxML tree inferred from combined dataset of ITS, LSU, SSU and tef1-α partial sequences of 168 strains of Phaeosphaeriaceae. Bootstrap support values for maximum likelihood (ML), maximum parsimony (MP) values ≥70%, and Bayesian posterior probabilities (BYPP) ≥0.95 are given above each branch respectively. The new species are highlighted in red, and the new record in green. Ex-type strains are in bold. The tree is rooted by Leptosphaeria doliolum (CBS 505.75) and Paraleptosphaeria dryadis (CBS 643.86).
Figure 3 from: Tennakoon DS, Thambugala KM, Wanasinghe DN, Gentekaki E, Promputtha I, Kuo C-H, Hyde KD (2020) Additions to Phaeosphaeriaceae (Pleosporales): Elongaticollum gen. nov., Ophiosphaerella taiwanensis sp. nov., Phaeosphaeriopsis beaucarneae sp. nov. and a new host record of Neosetophoma poaceicola from Musaceae. MycoKeys 70: 59-88. https://doi.org/10.3897/mycokeys.70.53674
Figure 3 Ophiosphaerella taiwanensis (MFLU 18-2534, holotype) a, b appearance of ascomata on host c close-up of ascomata d vertical section through ascoma e apex of ascoma f peridium g pseudoparaphyses h–j asci k, l ascospores m germinated ascospore in PDAn colony from above o colony from below. Scale bars: 100 µm (d, e), 15 µm (f), 50 µm (g–m).
Figure 3 from: Samarakoon BC, Wanasinghe DN, Samarakoon MC, Phookamsak R, McKenzie EH.C, Chomnunti P, Hyde KD, Lumyong S, Karunarathna SC (2020) Multi-gene phylogenetic evidence suggests Dictyoarthrinium belongs in Didymosphaeriaceae (Pleosporales, Dothideomycetes) and Dictyoarthrinium musae sp. nov. on Musa from Thailand. MycoKeys 71: 101-118. https://doi.org/10.3897/mycokeys.71.55493
Figure 3 Dictyoarthrinium sacchari (MFLU 20-0439) a conidia on the host b developmental stage of terminal conidium attached to the conidiophore c–f Conidiophores and conidia (e, with distinct mother cell) g, h mature conidiophores with four-celled terminal conidium i conidiophore with two celled terminal conidium j developmental stages of conidia on conidiophore k colony on PDA after 21 days l–q conidia. Scale bars: a = 1000 μm (a); 20 μm (b, j); 50 μm (c–i); 5 μm (l–q).
Figure 2 from: Samarakoon BC, Wanasinghe DN, Samarakoon MC, Phookamsak R, McKenzie EH.C, Chomnunti P, Hyde KD, Lumyong S, Karunarathna SC (2020) Multi-gene phylogenetic evidence suggests Dictyoarthrinium belongs in Didymosphaeriaceae (Pleosporales, Dothideomycetes) and Dictyoarthrinium musae sp. nov. on Musa from Thailand. MycoKeys 71: 101-118. https://doi.org/10.3897/mycokeys.71.55493
Figure 2 Dictyoarthrinium musae (MFLU 20-0437, holotype) a conidia on the host b conidiophore and conidia with conidiophore mother cell c–f conidia with conidiophores on stalk g developmental stage of an immature lateral conidium h four-celled terminal conidium i conidiophore j conidiophores and conidia with terminal conidium k, l conidiophores without terminal conidium m attachment of a mature lateral conidium n–q warted four-celled mature conidia r, s mature conidia that split at septa t colony on PDA after 21 days. Scale bars: 500 μm (a); 50 μm (b, c); 20 μm (d–g, i); 10 μm (h); 5 μm (j–s).
Figure 1 from: Samarakoon BC, Wanasinghe DN, Samarakoon MC, Phookamsak R, McKenzie EH.C, Chomnunti P, Hyde KD, Lumyong S, Karunarathna SC (2020) Multi-gene phylogenetic evidence suggests Dictyoarthrinium belongs in Didymosphaeriaceae (Pleosporales, Dothideomycetes) and Dictyoarthrinium musae sp. nov. on Musa from Thailand. MycoKeys 71: 101-118. https://doi.org/10.3897/mycokeys.71.55493
Figure 1 Maximum Likelihood tree revealed by RAxML from an analysis of SSU, LSU and ITS and tef1-α sequence data of the genera of Didymosphaeriaceae, showing the phylogenetic position of Dictyoarthrinium musae (MFLUCC 20-0105, MFLUCC 20-0106) and D. sacchari (MFLUCC 20-0107). ML bootstrap supports (≥ 60%) and Bayesian posterior probabilities (≥ 0.95 BYPP) are given above the branches, respectively. The tree is rooted with Bambusistroma didymosporum (MFLU 15-0057 and MFLU 15-0058). Strains generated in this study are indicated in brown bold type. Ex-type strains are indicated in black bold. The scale bar represents the expected number of nucleotide substitutions per site.
Figure 4 from: Samarakoon BC, Wanasinghe DN, Samarakoon MC, Phookamsak R, McKenzie EH.C, Chomnunti P, Hyde KD, Lumyong S, Karunarathna SC (2020) Multi-gene phylogenetic evidence suggests Dictyoarthrinium belongs in Didymosphaeriaceae (Pleosporales, Dothideomycetes) and Dictyoarthrinium musae sp. nov. on Musa from Thailand. MycoKeys 71: 101-118. https://doi.org/10.3897/mycokeys.71.55493
Figure 4 Morphology of conidia and conidiophores of previously described Dictyoarthrinium species a, dD. microsporumb, iD. synnematicumc, eD. lilliputeumf, jD. africanumg, h, kD. rabaulense. Scale bars: 20 μm (a, c, d, e); 10 μm (b, i). Magnification × 650 (f, g, h, j, k). Redrawn from Rao and Rao (1964), Ellis (1971), Kobayasi et al. (1971) and Somrithipol (2007).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.