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opencc-by-4.0Mar 2018View details →

Fig. 2. Statistical parsimony cladogram network representing relationships among the 45 haplotypes for a 615 in Genetic diversity of Halyomorpha halys (Hemiptera, Pentatomidae) in Korea and comparison with COI sequence datasets from East Asia, Europe, and North America

Fig. 2. Statistical parsimony cladogram network representing relationships among the 45 haplotypes for a 615 bp fragment of the COI gene of Halyomorpha halys. Each circle is labeled with haplotype number, and the size of each circle is proportional to the frequency of each haplotype [H3 (n = 353); H1 (n = 285); H22 (n = 43); H8 (n = 34); H33 (n = 23); H2 (n = 16); H32 (n = 8); H7, H9–H13, and H43 (n = 3); H6, H14, H34, H39, and H40 (n = 2); H4–H5, H12, H15–H21, H23, H30–H31, H35–H38, H41, H42, and H44–H51 (n = 1)]. Differing colors indicate countries in which samples were collected.

Fig. 5 in Prevalence and genetic diversity of Haemoproteus and Plasmodium in raptors from Thailand: Data from rehabilitation center

Fig. 5. Heatmap of pairwise genetic distances estimated from nucleotide sequences of the cytochrome b gene (479 nucleotides) of Plasmodium spp. using the JukesCanter model.

Fig. 4 in Prevalence and genetic diversity of Haemoproteus and Plasmodium in raptors from Thailand: Data from rehabilitation center

Fig. 4. Bayesian phylogeny based on the partial cytochrome b gene (479 base pairs) of Plasmodium lineages. The lineages isolated in this study are given in red bold. MalAvi lineage codes and GenBank accession numbers are given after species names. Node values indicate percentages of posterior probabilities. Plasmodium isolated from this study are clustered into three clades (clade I, II and II). (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)

Fig. 6 in Prevalence and genetic diversity of Haemoproteus and Plasmodium in raptors from Thailand: Data from rehabilitation center

Fig. 6. Haemoproteus spp. infected in Blyth's hawk-eagles (Spizaetus alboniger), KU549 (A-C) and KU589 (D-F). Young gametocytes (A&D), microgametocytes (B&E) and macrogametocytes (C&F). Giemsa staining.

Fig. 2 in Prevalence and genetic diversity of Haemoproteus and Plasmodium in raptors from Thailand: Data from rehabilitation center

Fig. 2. Bayesian phylogeny based on partial cytochrome b gene (479 nucleotides) of Haemoproteus lineages. The lineages isolated in this study are given in red bold. MalAvi lineage codes and GenBank accession numbers are given after species names. Node values indicate percentages of posterior probabilities. Vertical bars indicate clades of subgenus Haemoproteus (A) and Parahaemoproteus (B) Haemoproteus isolated from this study are clustered into two clades (clade I and II). (For interpretation of the references to colour in this figure legend, the reader is referred to the Web version of this article.)

Fig. 3 in Prevalence and genetic diversity of Haemoproteus and Plasmodium in raptors from Thailand: Data from rehabilitation center

Fig. 3. Heatmap of pairwise genetic distances estimated from nucleotide sequences of the cytochrome b gene (479 nucleotides) of Haemoproteus spp. using the JukesCanter model.

Fig. 1 in Prevalence and genetic diversity of Haemoproteus and Plasmodium in raptors from Thailand: Data from rehabilitation center

Fig. 1. Localities of the raptors included in this study. There were 30 provinces where the raptors are found and submitted into the Kasetsart University Raptor Rehabilitation Unit. These provinces are divided into four groups base on the number of raptors. Bangkok is the most common locality of raptor (n> 100).

opencc-by-4.0Apr 2022View details →

Fig. 1 in Prevalence and genetic diversity of Enterocytozoon bieneusi in nonhuman primates in Northern and Central China

Fig. 1. Phylogenetic tree of E. bieneusi genotypes identified in this study and known genotypes based on the Neighbor-Joining analysis of the internal transcribed spacer of the rRNA gene. The numbers on the branches represent percent bootstrapping values from 500 replicates, with values of>70.0% shown in the tree. The genotypes identified in this study were marked, with △ for known genotypes and ▴ for the novel genotypes.

FIGURE 3 in The most important fishery resource in the Amazon, the migratory catfish Brachyplatystoma vaillantii (Siluriformes: Pimelodidae), is composed by an unique and genetically diverse population in the Solimões-Amazonas River System

FIGURE 3 | Analysis of the BAPS 6.0 program showing three clusters (green, red, and blue) distributed between the five sampled locations of Brachyplatystoma vaillantii.

FIGURE 2 in The most important fishery resource in the Amazon, the migratory catfish Brachyplatystoma vaillantii (Siluriformes: Pimelodidae), is composed by an unique and genetically diverse population in the Solimões-Amazonas River System

FIGURE 2 | Network of Brachyplatystoma vaillantii haplotypes. The number shown within a circle identifies the number of specimens sharing those haplotypes; circles without numbers represent unique haplotypes. White circles represent hypothetical intermediate haplotypes. Each locality is represented by the same colors in Fig. 1: red – Tabatinga, orange – Tefé, green – Manaus, purple – Santarém and blue – Estuary.

FIGURE 1 in The most important fishery resource in the Amazon, the migratory catfish Brachyplatystoma vaillantii (Siluriformes: Pimelodidae), is composed by an unique and genetically diverse population in the Solimões-Amazonas River System

FIGURE 1 | Sampling sites for Brachyplatystoma vaillantii along the Solimões-Amazonas River axis. The localities were grouped in five fishing landing towns as follow: Red circles: Tabatinga (1 – Benjamin Constant, 2 – Tabatinga), Orange circles: Tefé (3 – Mucura Lake, 4 – Tefé, 5 – Vila Nova), Green circles: Manaus (6 – Manaus, 7 – Careiro da Várzea), Purple circles: Santarém (8 – Santarém, 9 – Tapará) and Blues circles: Estuary (10 – Almeirim, 11 – Gurupá, 12 – Breves, 13 – Belém, 14 – Salvaterra).

FIGURE 4 in The most important fishery resource in the Amazon, the migratory catfish Brachyplatystoma vaillantii (Siluriformes: Pimelodidae), is composed by an unique and genetically diverse population in the Solimões-Amazonas River System

FIGURE 4 | Analysis of the FASTBAPS program. Numbers are individual sequence of Brachyplatystoma vaillantii. Colors ranging from red for the lowest probabilities and clear yellow for the highest probabilities support for bootstrap.

FIGURE 1 in A new species of Knodus (Characiformes: Characidae), with deep genetic divergence, from the Mearim and Munim river basins, Northeastern Brazil, and evidence for hidden diversity in adjacent river basins

FIGURE 1 | Knodus guajajara, holotype, CICCAA 4883, 31.4 mm SL, Alto Alegre do Pindaré municipality, Igarapé Arapapá, Pindaré River drainage, Mearim River basin.

FIGURE 4 in A new species of Knodus (Characiformes: Characidae), with deep genetic divergence, from the Mearim and Munim river basins, Northeastern Brazil, and evidence for hidden diversity in adjacent river basins

FIGURE 4 | Knodus guajajara, CICCAA 4861, paratype, male, 31.9 mm SL Maranhão, Mearim River basin. A. Hooks on pelvic fin. B. Hooks on anal fin. (Photographed by F. P. Ottoni).

FIGURE 2 in A new species of Knodus (Characiformes: Characidae), with deep genetic divergence, from the Mearim and Munim river basins, Northeastern Brazil, and evidence for hidden diversity in adjacent river basins

FIGURE 2 | Knodus guajajara, paratypes. A. CICCAA 1518, 22.8 mm SL, Brazil, Maranhão, Alto Alegre do Pindaré municipality, igarapé Jenipapo, Pindaré River drainage, Mearim River basin. B. CICCAA 2696, 40.2 mm SL, Brazil, Maranhão, Chapadinha municipality, stream in riparian forest on the road BR–222, Munim River basin.

FIGURE 3 in A new species of Knodus (Characiformes: Characidae), with deep genetic divergence, from the Mearim and Munim river basins, Northeastern Brazil, and evidence for hidden diversity in adjacent river basins

FIGURE 3 | Knodus guajajara, CICCAA 4861, paratype, 31.9 mm SL, jaw suspensorium. A. Premaxillary. B. Maxilla. C. Dentary. Scale bar = 1 mm.

opencc-by-4.0Mar 2023View details →

FIGURE 3 in Genetic diversity of the species Cnesterodon hypselurus (Cyprinodontiformes: Poeciliidae) in Cinzas River basin: new record and headwater capture evidences

FIGURE 3 | Results of Bayesian analysis (STRUCTURE) for Cnesterodon hypselurus in Cinzas River basin (CIN) and Lambari stream (LAM), Itararé River basin. Estimates of the number of K groups based on mean A. Likelihood Ln(K) and B. ∆K statistic. C. Graphical representation based on K = 2. Each column represents a different individual and the colors represent the probability membership coefficient of that individual for each genetic cluster.

opencc-by-4.0Mar 2023View details →

FIGURE 1 in Genetic diversity of the species Cnesterodon hypselurus (Cyprinodontiformes: Poeciliidae) in Cinzas River basin: new record and headwater capture evidences

FIGURE 1 | Distribution of Cnesterodon hypselurus occurrence locations and the sampling sites used in the genetic study. CIN - new occurrence record in Cinzas River basin (unnamed stream), LAM - Lambari and PED - Pedrinhas streams in Itararé River basin and GUA - Guaricanga stream in Tibagi River basin (Source: modified from Silva et al., 2015; Franco-Magalhaes et al., 2010, and Google Earth, 2018, https://www. google.com.br/maps).

opencc-by-4.0Mar 2023View details →

FIGURE 2 in Genetic diversity of the species Cnesterodon hypselurus (Cyprinodontiformes: Poeciliidae) in Cinzas River basin: new record and headwater capture evidences

FIGURE 2 | Results from mtDNA (D-Loop) of Cnesterodon hypselurus samples obtained in Cinzas River basin (CIN) and some other locations along the occurrence area reported for this species. A. Haplotype network. Circle sizes are proportional to haplotype frequency. Mismatch distributions of mitochondrial haplotypes for CIN and LAM are shown in B and C, respectively.