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372 results for “hawaii”
Genomic resources for Macadamia tetraphylla and an examination of its historic use as a crop resource in Hawaii
<p><em>Macadamia tetraphylla </em>is a wild relative of the economically valuable crop <em>Macadamia integrifolia. </em>Genomic knowledge of crop wild relatives is central to determining their possible role in breeding programs to mitigate biotic and abiotic stress in the future. The data stored here represent SNP files for material found on Oahu and assembled transcriptomes from different tissue types. </p>
Reservoirs of Hawaii
<p>Accompanying file to "Loss of Reservoir Capacity through Sedimentation in Hawai`i: Management Implications for the Twenty-First Century", Pacific Science, 72(1), 2017. This file includes reservoir information acquired from the National Reservoir Database and the Hawaii Department of Land and Natural Resources, Dam Safety Program. In addition, it includes sedimentation estimates and capacity estimates from 2015 analysis. </p>
Figure 9 in Ramie Moth, Arcte coerula (Lepidoptera: Noctuidae): A New Invasive Pest in Hawaii on Endemic Plants
Figure 9. Arcte coerula adult. The hindwing markings are distinctive of this species.
Figure 1 in Statewide Survey of Insects Found on Coffee in Hawaii
Figure 1. Map of coffee pest survey locations throughout the State of Hawaii.
Figure 8 in Ramie Moth, Arcte coerula (Lepidoptera: Noctuidae): A New Invasive Pest in Hawaii on Endemic Plants
Figure 8. Arcte coerula pupa.
The role of plume-lithosphere interaction in Hawaii-Emperor chain formation
<p>Numerical modeling data of the research paper "The role of plume-lithosphere interaction in Hawaii-Emperor chain formation" published in Nature Communications.</p>
Dataset for "Divergent selection and primary gene flow shape incipient speciation of a riparian tree on Hawaii Island"
<p>HawaiiPopulation_Raw.bcf.gz</p> <p>- Unfiltered SNP + INDEL VCF file for Hawaii Island Metrosideros</p> <p> </p> <p>HawaiiPopulation_FILTERED_SNP.bcf.gz</p> <p>- Filtered SNP VCF for Hawaii Island Metrosideros</p> <p> </p> <p>Population_WithOutgroup_Raw.vcf.gz</p> <p>- Unfiltered SNP + INDEL VCF file used in analysis that grouped G<sub>H1</sub>, G<sub>H2</sub>, N subpopulation with the outgroup samples.</p> <p> </p> <p>Population_WithOutgroup_FILTERED_SNP.vcf.gz</p> <p>- Filtered SNP VCF file used in analysis that grouped G<sub>H1</sub>, G<sub>H2</sub>, N subpopulation with the outgroup samples.</p> <p> </p> <p>Population_WithOutgroup.geno.gz</p> <p>- Genotype file generated from the genomic_general from S. Martin and used as input for Dxy and Fst window analysis</p> <p> </p> <p>Popgene_stat*</p> <p>- 5, 10, and 50 kbp windows of calculating pi, Dxy, Fst, Omega, Hscan, and H12 statistics </p> <p> </p> <p>GPHOCS_INPUT.txt</p> <p>- Input data file for GPhoCS analysis</p> <p> </p> <p>GPHOCS_control_*</p> <p>- GPhoCS control file</p> <p> </p> <p>DADI_INPUT*</p> <p>- Input 2D-SFS file for dadi analysis</p>
Figure 1 in Twenty Years of Complaints: Arthropods of Medical Importance in Maui County, Hawaii, from 2000 to 2019
Figure 1. Maui island divided by study regions used to analyze arthropod pest complaints.
Figure 5 in Macadamia Felted Coccid, Eriococcus ironsidei: Biology and Life Cycle in Hawaii
Figure 5. Complete life cycles of female and male E. ironsidei.
Figure 1 in Macadamia Felted Coccid, Eriococcus ironsidei: Biology and Life Cycle in Hawaii
Figure 1. Adult female rostrum, indicated by red arrows.
Figure 2. A in Defoliation of the Invasive Tree Falcataria moluccana on Hawaii Island by the Native Koa Looper Moth (Geometridae: Scotorythra paludicola), and Evaluation of Five Fabaceous Trees as Larval Hostplants
Figure 2. A defoliated Falcataria moluccana
High-resolution Canopy Height Model of Hawaii Island 2018-2020
<p>Forest canopy height model for Hawaii Island using lairborne lidar data collected by NOAA in 2018, 2019 and 2020. The maps are produced by year at the resolution of 1 m. The raw point cloud data had am average point cloud density of 8 pulses per squre m. https://noaa-nos-coastal-lidar-pds.s3.amazonaws.com/laz/geoid12b/9635/index.html</p> <p>ALS 2018 data was reprocessed using Lastools software to reclassify ground class (2)</p> <p>ALS 2019_20 was also reprocessed using Lastools software to reclassify unclassified (1) points to vegetation (5)</p> <p>The CHM’s generation procedure is composed by four steps. It starts by the creation of 500m x 500m tiles using a 50m buffer, resorting to the lastile function, followed by the lasheight function that is used to compute the elevation of each point above the ground. Then, the lastile function is used again to remove the buffer from the normalised point clouds. These first three steps resort to the LASTools software. The fourth, and final step, consists in the generation of the CHM with a 1 m resolution resorting to the pit-free algorithm implemented in the rasterize_canopy function from the lidR package.</p> <p>The file is a GeoTIFF with LZW compression in ArcGIS pro 3.3 </p> <p>EPSG:6635</p> <p>Use of these data requires citation of this dataset </p>
2015 Hawaii Ocean Experiment - Legacy 2A, Water Column Data
<p>This dataset consists of samples taken at various depths in the water column from niskin bottles attached to a CTD rosette on the HOE Legacy 2A Diel cruise in 2015. The objective of the cruise was to deploy and follow free-drifting surface drifters in the vicinity of the Hawaii Ocean Time-series (HOT) station (Station ALOHA; defined as a circle with a 6 nautical mile radius centered at 22° 45N, 158°W). The overall goal was to conduct a comprehensive analysis of the diel patterns in phytoplankton physiology and biogeochemical cycling in near-surface waters of the oligotrophic North Pacific Ocean. Such diel patterns in ecology are particularly relevant in biological oceanographic research where the planktonic biomass turns over on timescales of days.</p>
2016 Hawaii Ocean Experiment - Legacy 4, Water Column Data
<p>This dataset consists of samples taken at various depths in the water column from niskin bottles attached to a CTD rosette on the HOE Legacy 4 cruise in 2016. Mesoscale eddies shape the temporal and spatial variability of ecosystem processes in many regions of the World Ocean, but an exhaustive description of their influence on the plankton community is still missing, partly due to the complex physical-biological interaction taking place inside the eddies. HOE-Legacy 4 was an oceanographic cruise organized by the Simons Collaboration on Ocean Processes and Ecology (SCOPE) and the Center for Microbial Oceanography: Research and Education (C-MORE) in 2016. The cruise took place in the northeast sector of the North Pacific Subtropical Gyre during May 9-14 2016 onboard the research vessel Kaimikai-o-Kanaloa, leaving from and returning to the port of Honolulu. HOE-Legacy 4 was one of a series of cruises investigating the biogeochemical and ecological variability associated with mesoscale eddies, that are regions of the ocean with diameters of tens to hundreds of kilometers characterized by a rotational motion.</p>
2016 Hawaii Ocean Experiment - Legacy 3, Water Column Data
<p>This dataset consists of samples taken at various depths in the water column from niskin bottles attached to a CTD rosette on the HOE Legacy 3 cruise in 2016. The objective of the cruise was to conduct water-column observations and sampling within an anticyclonic eddy to the north of the Hawaiian Islands. Surface drifters were deployed to track the eddy, and water- column sampling was conducted using the CTD-rosettes alongside the drifters for the duration of the cruise. The SVP drifter locations were transmitted every 30 mins.</p>
CB4856 C. elegans Wild Isolate (Hawaii, USA) | 2010-11-26T10:37:45+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=LwMaGrQ3EVA</li> <li><b>strain</b> : CB4856</li> <li><b>timestamp</b> : 2010-11-26T10:37:45+00:00</li> <li><b>gene</b> : -N/A-</li> <li><b>chromosome</b> : -N/A-</li> <li><b>allele</b> : -N/A-</li> <li><b>strain_description</b> : C. elegans Wild Isolate (Hawaii, USA)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : clockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : 399 CB4856 on food L_2010_11_26__10_37_45___8___1</li> <li><b>total time (s)</b> : 898.967</li> <li><b>frames per second</b> : 30.03</li> <li><b>video micrometers per pixel</b> : 4.52278</li> <li><b>number of segmented skeletons</b> : 26967</li> </ul>
CB4856 C. elegans Wild Isolate (Hawaii, USA) | 2011-03-08T12:25:53+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=AaxGIVYRDc0</li> <li><b>strain</b> : CB4856</li> <li><b>timestamp</b> : 2011-03-08T12:25:53+00:00</li> <li><b>gene</b> : -N/A-</li> <li><b>chromosome</b> : -N/A-</li> <li><b>allele</b> : -N/A-</li> <li><b>strain_description</b> : C. elegans Wild Isolate (Hawaii, USA)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : 399 CB4856 on food R_2011_03_08__12_25_53___8___3</li> <li><b>total time (s)</b> : 898.933</li> <li><b>frames per second</b> : 30.03</li> <li><b>video micrometers per pixel</b> : 4.52754</li> <li><b>number of segmented skeletons</b> : 26978</li> </ul>
CB4856 C. elegans Wild Isolate (Hawaii, USA) | 2011-03-10T12:06:01+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=O_H4FLZVXHM</li> <li><b>strain</b> : CB4856</li> <li><b>timestamp</b> : 2011-03-10T12:06:01+00:00</li> <li><b>gene</b> : -N/A-</li> <li><b>chromosome</b> : -N/A-</li> <li><b>allele</b> : -N/A-</li> <li><b>strain_description</b> : C. elegans Wild Isolate (Hawaii, USA)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : 399 CB4856 on food R_2011_03_10__12_06_01___8___5</li> <li><b>total time (s)</b> : 898.967</li> <li><b>frames per second</b> : 30.03</li> <li><b>video micrometers per pixel</b> : 4.52754</li> <li><b>number of segmented skeletons</b> : 26663</li> </ul>
CB4856 C. elegans Wild Isolate (Hawaii, USA) | 2011-03-15T16:21:26+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=szwNN2wGJ6E</li> <li><b>strain</b> : CB4856</li> <li><b>timestamp</b> : 2011-03-15T16:21:26+00:00</li> <li><b>gene</b> : -N/A-</li> <li><b>chromosome</b> : -N/A-</li> <li><b>allele</b> : -N/A-</li> <li><b>strain_description</b> : C. elegans Wild Isolate (Hawaii, USA)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : 399 CB4856 on food R_2011_03_15__16_21_26___7___11</li> <li><b>total time (s)</b> : 899.0</li> <li><b>frames per second</b> : 30.03</li> <li><b>video micrometers per pixel</b> : 4.2072</li> <li><b>number of segmented skeletons</b> : 26697</li> </ul>
CB4856 C. elegans Wild Isolate (Hawaii, USA) | 2011-02-17T16:46:08+00:00
<blockquote> <p>This experiment is part of the <em>C.elegans behavioural database</em>. For more information and the complete collection of experiments visit http://movement.openworm.org</p> </blockquote> <ul> <li><b>preview link</b> : https://www.youtube.com/watch?v=LR5T5JDiO2o</li> <li><b>strain</b> : CB4856</li> <li><b>timestamp</b> : 2011-02-17T16:46:08+00:00</li> <li><b>gene</b> : -N/A-</li> <li><b>chromosome</b> : -N/A-</li> <li><b>allele</b> : -N/A-</li> <li><b>strain_description</b> : C. elegans Wild Isolate (Hawaii, USA)</li> <li><b>sex</b> : hermaphrodite</li> <li><b>stage</b> : adult</li> <li><b>ventral_side</b> : anticlockwise</li> <li><b>media</b> : NGM agar low peptone</li> <li><b>arena</b> : <ul> <li><b>style</b> : petri</li> <li><b>size</b> : 35</li> <li><b>orientation</b> : away</li> </ul> </li> <li><b>food</b> : OP50</li> <li><b>habituation</b> : 30m wait</li> <li><b>who</b> : Laura Grundy</li> <li><b>protocol</b> : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li><b>lab</b> : <ul> <li><b>name</b> : William R Schafer</li> <li><b>location</b> : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li><b>software</b> : <ul> <li><b>name</b> : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li><b>version</b> : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li><b>featureID</b> : @OMG</li> </ul> </li> <li><b>base_name</b> : 399 CB856 on food R_2011_02_17__16_46_08___7___11</li> <li><b>total time (s)</b> : 897.961</li> <li><b>frames per second</b> : 28.3286</li> <li><b>video micrometers per pixel</b> : 4.2072</li> <li><b>number of segmented skeletons</b> : 20575</li> </ul>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.