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231
datasets available to search
ShareScore release 0.9.0
Dataset results
231 results for “molecular features”
Knockdown of heterochromatin protein 1 binding protein 3 recapitulates phenotypic, cellular, and molecular features of aging [RNA-Seq]
GEO Series GSE119318. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Knockdown of heterochromatin protein 1 binding protein 3 recapitulates phenotypic, cellular, and molecular features of aging [miRNA-Seq]
GEO Series GSE119319. Mus musculus. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
ATF3-induced mammary tumors exhibit molecular features of human basal-like breast cancer
GEO Series GSE162804. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Comparative analysis of response to treatments and molecular features of tumor- derived organoids versus cell lines and PDX derived from the same clear cell ovarian adenocarcinoma
GEO Series GSE237277. Homo sapiens. 7 samples. Type: Expression profiling by array.
ALS molecular subtypes are a combination of cellular and pathological features learned by deep multiomics classifiers (postmortem cortex)
GEO Series GSE272624. Homo sapiens. 289 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional profiling of microglia in the injured brain reveals distinct molecular features underlying neurodegeneration
GEO Series GSE163691. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Molecular encoding of stimulus features in a single sensory neuron type enables neuronal and behavioral plasticity
GEO Series GSE222226. Caenorhabditis elegans. 10 samples. Type: Expression profiling by high throughput sequencing.
Syngeneic model of carcinogen-induced tumor mimics basal/squamous, stromal-rich, and neuroendocrine molecular and immunological features of muscle-invasive bladder cancer
GEO Series GSE220999. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Molecular indicators of stress-induced neuroinflammation in a mouse model simulating features of post-traumatic stress disorder
GEO Series GSE85495. Mus musculus. 40 samples. Type: Methylation profiling by genome tiling array.
No safe renal warm ischemia time-The molecular network characteristics and pathological features of mild to severe ischemia reperfusion kidney injury
GEO Series GSE192883. Mus musculus. 27 samples. Type: Expression profiling by high throughput sequencing.
Analysis of time series gene expression and DNA methylation reveals the molecular features of myocardial infarction progression
GEO Series GSE206282. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
High-throughput mapping of single-neuron projection and molecular features by retrograde barcoded labelling [scRNA-seq]
GEO Series GSE210172. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Multi-omics comparison of malignant and normal uveal melanocytes reveals novel molecular features of uveal melanoma
GEO Series GSE199679. Homo sapiens. 50 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other.
Characterizing the molecular features of ERG-positive tumors in primary and castration resistant prostate cancer
GEO Series GSE74367. Homo sapiens. 76 samples. Type: Expression profiling by array.
Immune evolution from preneoplasia to invasive lung adenocarcinomas and underlying molecular features
GEO Series GSE169033. Homo sapiens. 85 samples. Type: Expression profiling by array.
DNA methylation epitypes of Burkitt lymphoma with distinct molecular and clinical features
GEO Series GSE292690. Homo sapiens. 237 samples. Type: Methylation profiling by genome tiling array.
SInsights into molecular features of Venerupis decussata oocytes: a microarray-based study.
GEO Series GSE58906. Ruditapes decussatus. 15 samples. Type: Expression profiling by array.
PMP22 antisense oligonucleotides reverse clinical, pathological, and molecular features of Charcot-Marie-Tooth disease type 1A
GEO Series GSE103799. Mus musculus. 43 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Profiling Reveals Intratumoral Heterogeneity and Molecular Features in Breast Cancer
GEO Series GSE195861. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
MelanoDB: A Database of clinical and molecular features of advanced melanoma patients treated with2 MAPK inhibitors
<p>MAPK inhibitors have significantly improved overall survival in patients with metastatic melanoma disease but their efficacy is still limited by primary or acquired resistance. Several studies have attempted to predict response to MAPK inhibitor therapy, however the lack of a consistent cohort prevents better definition of associations between treatment efficacy and clinical and/or molecular features. Here, we present MelanoDB, a collection of patients with metastatic melanoma treated with MAPK inhibitors. We formatted data from 8 different studies for a total of 417 cases to gather common clinical and molecular features. Whole or partial exome sequencing is available for 191 cases and gene expression for 132 cases. We provide a web application to explore the integrated data and its distribution among the collected studies, and we share this dataset to the scientific community according to FAIR principles</p> <p>The database can be operated using applications, software and programming languages such as DB Viewer, Rstudio or Python. </p> <p>Here we provide a link to the web viewer application to explore the database: http://melanodb-ircm.montp.inserm.fr/</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.