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3,761 results for “phylogenetic relationships”
Figure 10 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 10. Octopupilla felix gen. nov., sp. nov., holotype, female, 7.7 mm, NSMT-Cr 16655. A, pereopod 3; B, dactylus of pereopod 3; C, pereopod 4. Scale bars = 0.1 mm.
Figure 16 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 16. Lucioblivio kozaensis gen. nov., sp. nov., holotype, female, 6.3 mm, NSMT-Cr 16662. A, gnathopod 1; B, palmar margin of propodus and dactylus of gnathopod 1; C, gnathopod 2; D, palmar margin of propodus and dactylus of gnathopod 2; E, posteromarginal setae of propodus of gnathopod 2; F, anteromarginal setae of carpus of gnathopod 2. Scale bars = 0.1 mm.
Figure 3 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 3. Eoniphargus kojimai (Uéno, 1955), male, 4.3 mm, NSMT-Cr 16652; female, 4.6 mm, NSMT-Cr 16653. A, antenna 1 (some flagellar articles are omitted); B, accessory flagellum of antenna 1; C, aesthetasc on flagellar article of antenna 1; D, antenna 2 (some flagellar articles are omitted); E, calceolus on flagellar article of antenna 2; F, antenna 1 (female, some flagellar articles are omitted); G, accessory flagellum of antenna 1 (female); H, aesthetasc on flagellar article of antenna 1 (female); I, antenna 2 (female, some flagellar articles are omitted); J, gnathopod 1; K, palmar margin and dactylus of gnathopod 1 (some setae are omitted); L, gnathopod 2; M, palmar margin and dactylus of gnathopod 2 (some setae are omitted); N, gnathopod 1 (female); O, palmar margin and dactylus of gnathopod 1 (female); P, gnathopod 2 (female); Q, palmar margin and dactylus of gnathopod 2 (female, some setae are omitted). F–H, N–Q, female; others, male. Scale bars = 0.1 mm unless indicated otherwise.
Figure 6 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 6. Scanning electron micrographs of Eoniphargus kojimai (Uéno, 1955), male, 4.3 mm; female, 4.4 mm. A, antenna 2; B, calceoli on antenna 2; C, right mandible; D, molar of right mandible. A–B, male; C–D, female.
Figure 15 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 15. Lucioblivio kozaensis gen. nov., sp. nov., holotype, female, 6.3 mm, NSMT-Cr 16662. A, maxilliped; B, inner plate of maxilliped; C, outer plate of maxilliped; D, dactylus of maxilliped; E–G, dorsal margins of pleonites 1–3; H–J, dorsal margins of urosomites 1–3; K–M, epimeral plates 1–3; N, uropod 1; O, uropod 2; P, uropod 3; Q, inner plate of uropod 3; R, outer plate of uropod 3; S, telson, dorsal. Scale bars = 0.1 mm.
Figure 5 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 5. Eoniphargus kojimai (Uéno, 1955), male, 4.3 mm, NSMT-Cr 16652; female, 4.6 mm, NSMT-Cr 16653. A–C, dorsal margins of pleonites 1–3; D–F, dorsal margins of urosomites 1–3; G, pleopod 1 (plumose setae on rami are omitted); H, retinacula of pleopod 1; I, bifid setae of pleopod 1; J, pleopod 2 (plumose setae on rami are omitted); K, pleopod 3 (plumose setae on rami are omitted); L, pleopod 1 (female, rami are omitted); M, pleopod 2 (female, rami are omitted); N–P, epimeral plates 1–3; Q, epimeral plate 2 (female); R, uropod 1; S, uropod 2; T, uropod 2 (female); U, uropod 3; V, terminal article of outer ramus of uropod 3; W, uropod 3 (female); X, telson, dorsal; Y, telson, dorsal (female). L, M, Q, T, W, Y, female; others, male. Scale bars = 0.1 mm unless indicated otherwise.
Figure 13 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 13. Lucioblivio kozaensis gen. nov., sp. nov., holotype, female, 6.3 mm, NSMT-Cr 16662. Habitus, left, appendages omitted. A1, antenna 1; A2, antenna 2.
Figure 9 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 9. Octopupilla felix gen. nov., sp. nov., holotype, female, 7.7 mm, NSMT-Cr 16655. A, gnathopod 1; B, palmar margin of propodus of gnathopod 1 (some setae are omitted); C, dactylus of gnathopod 1; D, gnathopod 2; E, palmar margin of propodus of gnathopod 2 (some setae are omitted); F, dactylus of gnathopod 2. Scale bars = 0.1 mm.
Figure 12 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 12. Octopupilla felix gen. nov., sp. nov., holotype, female, 7.7 mm, NSMT-Cr 16655. A–C, dorsal margins of pleonites 1–3; D–F, dorsal margins of urosomites 1–3; G–I, epimeral plates 1–3; J, uropod 1; K, uropod 2; L, inner ramus of uropod 2; M, outer ramus of uropod 2; N, uropod 3; O, distal part of inner ramus of uropod 3; P, terminal article of outer ramus of uropod 3. Scale bars = 0.1 mm.
Figure 21 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 21. Two patterns of character evolution for one clade of the strict consensus tree obtained by maximum parsimony analysis. Solid bars indicate character states common to Lucioblivio, Octopupilla and Eoniphargus, indicated by numbers: 1, eyes reduced or lacking; 2, coxal gills pedunculate; 3, coxae 1–4 reduced in size; 4, pereopods feeble; 5, pereonites with numerous fine setae. White bars indicate alternative character states.
Figure 1 in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 1. Known distributions of Eoniphargus kojimai Uéno, 1955, Octopupilla felix sp. nov. and Lucioblivio kozaensis sp. nov. Filled circles, E. kojimai; filled triangles, O. felix; open circles, L. kozaensis.
Figure 3. The phylogenetic relationship between G in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
Figure 3. The phylogenetic relationship between G. bucephalus and the other Pipistrellini species is inferred by maximum likelihood analysis based on cytb sequences. The numbers in the branches show the bootstrap values. Vespertilio species are used as outgroups.
Figure 2. The phylogenetic relationship between G in The Complete Mitochondrial Genome of Glischropus bucephalus (Vespertilionidae; Chiroptera) Provides New Evidence for Pipistrellus Paraphyly
Figure 2. The phylogenetic relationship between G. bucephalus and the other Vespertilioninae species is inferred by the maximum likelihood analysis based on the concatenated protein-coding gene sequences. The bootstrap values (indicated by the slashes on the branches) correspond to the trees constructed on full sequences (three codon positions), the first two codon positions (third positions omitted), and two positions with the exclusion of the Nd6 gene. The asterisks mark branches that in the second or third case have a different topology than shown. Myotis species are used as outgroups.
Multiple dimensions of phylogenetic diversity are needed to explain the complex aboveground-belowground diversity relationships
<p>The complex relationship between aboveground and belowground diversity and whether they act as surrogates for one another remains unresolved. Increasing evidence suggests that investigating phylogenetic diversity could provide valuable insights into the interplay between plants and soil microbes, but the proliferation of phylogenetic diversity metrics has hindered comparative studies and the identification of general patterns. To overcome this challenge, we implemented a multi-dimensional framework that classifies phylogenetic diversity metrics into three dimensions: richness, divergence, and regularity, each of which captures different ecological aspects of species differences. Then we applied this framework to investigate the relationship between above and belowground diversity in a subtropical forest in Eastern China. We found that phylogenetic diversity of plant and soil microbes, including bacteria and fungi, were more strongly correlated at the richness and regularity dimension compared with divergence dimension. Further analyses revealed that these observed correlation patterns can be attributed to the influence of soil total phosphorus content, which is the limiting factor of plant and microbial phylogenetic diversity at richness and regularity dimensions. Together, our study demonstrated the necessity of using a multi-dimensional approach to advance our understanding of the complex relationships between plant and soil microbial biodiversity.</p>
FIGURE 4 Phylogenetic relationships within the genus Longidorus. Bayesian 50 in Molecular phylogenetic analysis and comparative morphology reveals the diversity and distribution of needle nematodes of the genus Longidorus (Dorylaimida: Longidoridae) from Spain
FIGURE 4 Phylogenetic relationships within the genus Longidorus. Bayesian 50% majority rule consensus tree as inferred from cytochrome c oxidase subunit I (CoxI) mtDNA gene sequence alignment under the general time-reversible model of sequence evolution with correction for invariable sites and a gammashaped distribution (GTR + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site.
FIGURE 3 Phylogenetic relationships within the genus Longidorus. Bayesian 50 in Molecular phylogenetic analysis and comparative morphology reveals the diversity and distribution of needle nematodes of the genus Longidorus (Dorylaimida: Longidoridae) from Spain
FIGURE 3 Phylogenetic relationships within the genus Longidorus. Bayesian 50% majority rule consensus tree as inferred from 18S rRNA gene sequence alignment under a transitional model with invariable sites and a gamma correction (TIM 2 + I + G). Posterior probabilities greater Downloaded than 0.70 from are Brill given.comfor08/29/ appropriate 2023 05:44:51PM clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changesvia per site free. access
FIGURE 1 Phylogenetic relationships within the genus Longidorus. Bayesian 50 in Molecular phylogenetic analysis and comparative morphology reveals the diversity and distribution of needle nematodes of the genus Longidorus (Dorylaimida: Longidoridae) from Spain
FIGURE 1 Phylogenetic relationships within the genus Longidorus. Bayesian 50% majority rule consensus tree as inferred from D2 and D3 expansion domains of 28S rRNA sequence alignment under an SYM model with invariable sites and a gamma-shaped distribution (SYM + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site. ** = Branches collapsed, indicating clustered Longidorus species. For a more specific detail of collapsed clades, see supplementary fig. S1.
FIGURE 2 Phylogenetic relationships within the genus Longidorus. Bayesian 50 in Molecular phylogenetic analysis and comparative morphology reveals the diversity and distribution of needle nematodes of the genus Longidorus (Dorylaimida: Longidoridae) from Spain
FIGURE 2 Phylogenetic relationships within the genus Longidorus. Bayesian 50% majority rule consensus tree as inferred from ITS1 rRNA sequence alignment under a 3-parameter model with invariable sites and a gamma-shaped distribution (TPM3 µf + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. Scale bar = expected changes per site. Downloaded from Brill.com08/29/2023 05:44:51PM via free access
Figure 5 A–B in Phylogenetic relationships of the bacchine Flower Flies (Diptera: Syrphidae) based on molecular characters, with a description of a new species of Melanostoma (Schiner, 1860)
Figure 5 A–B: Melanostoma quadripunctatum (Skevington & Thompson, 2014) comb. nov., male holotype. A, lateral view; B, habitus. C, Melanostoma janeceki Mengual, sp. nov., male holotype, ventral view. D, Melanostoma janeceki Mengual, sp. nov., male paratype (ZFMK-DIP-00015941), detail of metasternum (ms). E, Melanostoma janeceki Mengual, sp. nov., female paratype (ZFMK-DIP-00015957), ventral view. F, Melanostoma quadripunctatum, female (ZFMK-DIP-00015952), ventral view.
Figure 4 A–B in Phylogenetic relationships of the bacchine Flower Flies (Diptera: Syrphidae) based on molecular characters, with a description of a new species of Melanostoma (Schiner, 1860)
Figure 4 A–B: Melanostoma sp. from Cameroon (ZFMK-DIP-00015959) with complete metasternum. A, lateral view; B, habitus. C–H: Platycheirus solitarius (van Doesburg, 1955) comb. nov. C, female holotype, lateral view; D, female holotype, habitus; E, female holotype, Downloaded frontal from view; F, Brill. female com 12/ holotype 12/2023, labels 03:06;: G 37, PM female paratype, lateral viewvia; H, Open femaleAccess. paratypeThis, is headan, open lateralaccess view. article distributed under the terms of the CC-BY 4.0 License. https://creativecommons.org/licenses/by/4.0/
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.