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208
datasets available to search
ShareScore release 0.9.0
Dataset results
208 results for “spatial association”
Cancer-associated Fibroblast Spatial Heterogeneity and EMILIN1 Expression in Cancer Stroma Modulate TGF-b Activity and CD8+ T-Cell Infiltration in Breast Cancer
GEO Series GSE243022. Homo sapiens. 4 samples. Type: Other; Expression profiling by high throughput sequencing.
Transcriptional programs of cell identity and p53-induced stress responses are associated with distinctive features of spatial genome organization [SuperSeries]
GEO Series GSE279021. Homo sapiens. 160 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Antagonism between H3K27me3 and genome-lamina association drives atypical spatial genome organization in the totipotent embryo
GEO Series GSE218598. Mus musculus. 38 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Exercise Training Reduces the Inflammatory Response and Promotes Intestinal Mucosa-associated Immunity in Lynch Syndrome patients [GeoMx Digital Spatial Profiling (DSP)]
GEO Series GSE210011. Homo sapiens. 54 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics unveils novel potential disease mechanisms associated with the microenvironment in Multiple Myeloma
GEO Series GSE269875. Homo sapiens; Mus musculus. 15 samples. Type: Other.
Single-cell Spatial Transcriptomics Reveals Hepatocyte Metabolic Reprogramming in Fontan Associated Liver Disease
GEO Series GSE310443. Homo sapiens. 2 samples. Type: Other.
Multi-region spatial transcriptome analysis reveals cellular networks and pathways associated with hepatocellular carcinoma recurrence after surgical resection
GEO Series GSE281759. Homo sapiens. 17 samples. Type: Other.
Spatial transcriptome of Nematostella vectensis apical organ reveals its molecular signature and associated cells
GEO Series GSE159166. Nematostella vectensis. 10 samples. Type: Expression profiling by high throughput sequencing.
Integration of single-nuclei RNA-sequencing and spatial transcriptomics defines the complex microenvironment of NF1-associated plexiform neurofibromas
GEO Series GSE232766. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatial transcriptome analysis reveals Notch pathway-associated prognostic markers in IDH1 wild-type glioblastoma involving the subventricular zone
GEO Series GSE83537. Homo sapiens. 36 samples. Type: Expression profiling by array.
Mesenchymal-like tumor cells and myofibroblastic cancer-associated fibroblasts are associated with progression and immunotherapy response of clear-cell renal cell carcinoma [spatial transcriptomics]
GEO Series GSE210041. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Antagonism between H3K27me3 and genome-lamina association drives atypical spatial genome organization in the totipotent embryo [CELseq]
GEO Series GSE273151. Mus musculus. 1 samples. Type: Other.
Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma
GEO Series GSE193460. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
IL-1b+ tumor-associated macrophages fuel pathogenic inflammation in pancreatic cancer - Spatial transcriptomics of mouse PDAC samples
GEO Series GSE217843. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis
GEO Series GSE299165. Homo sapiens. 3 samples. Type: Other.
Single-cell and spatial transcriptomics analysis of tobacco-associated lung adenocarcinoma development, and in response to targeting inflammation alone or in combination with immune checkpoint blockad
GEO Series GSE300293. Mus musculus. 19 samples. Type: Other.
The cervicovaginal microbiome associates with spatially restricted host transcriptional signatures throughout the human ectocervical epithelium and submucosa
GEO Series GSE300112. Homo sapiens. 12 samples. Type: Other.
Complex interaction of tumor-derived factors instructs the spatially distinct phenotypes of tumor-associated macrophages [scRNA-Seq]
GEO Series GSE237849. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Hippocampal Subregion Transcriptomic Profiles Associated with Age-Related Changes in Spatial Pattern Separation
GEO Series GSE140420. Rattus norvegicus. 84 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell and Spatially Resolved Interactomics of Tooth-Associated Keratinocytes in Periodontitis
GEO Series GSE266897. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.