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230 results for “species presence”
FIGURES 9–15 in The presence of Notanisus Walker (Hymenoptera: Pteromalidae) in North America and revision of the oulmesiensis species group
FIGURES 9–15. Notanisus sexramosus ♂. 9, head and pronotum, dorsolateral (2014-47). 10, head and antenna, lateral (2014- 3). 11, lateral habitus (2014-3). 12, mesosoma, dorsal (2014-4). 13, fore wing (2014-4). 14 and 15, petiole and base of gaster (2014-4): 14, dorsal; 15, ventral (dashed line in Fig. 14 delimits posterior body from anterior neck of petiole).
FIGURES 46–52 in The presence of Notanisus Walker (Hymenoptera: Pteromalidae) in North America and revision of the oulmesiensis species group
FIGURES 46–52. Notanisus longipetiolus ♂. 46, lateral habitus (2014-37). 47, dorsal habitus (2014-38). 48, head and pronotum, frontolateral (2014-38). 49, antenna, lateral (2014-46). 50, fore wing (2014-46). 51, propodeum–base of gaster and metacoxae, dorsal (2014-38). 52, mesepimeron–petiole and metacoxa, lateral (2014-37).
FIGURES 53–61 in The presence of Notanisus Walker (Hymenoptera: Pteromalidae) in North America and revision of the oulmesiensis species group
FIGURES 53–61. Notanisus oulmesiensis ♀. 53, lateral habitus (2014-41). 54, head and pronotum (2014-39). 55, pronotum and mesonotum, dorsolateral (2014-39). 56, mesosoma including coxae, lateral (2014-41). 57, axillar-scutellar complex (2014- 39). 58, propodeum and coxae, dorsal (2014-39). 59, antenna, lateral (2014-40). 60, fore wing (2014-39); 61, fore wing apex (2014-39) (arrow points to dorsal bare region).
Distribution. Main tropical rainforest belt from Senegal and Guinea Bissau to NW Uganda and E DR Congo, reaching as S boundary N Angola (Cabinda); no recent records from Gambia or Chad and its presence is uncertain in S Sudan and SW Ethiopia. As a species that may range widely through gallery forests, it may also occur in adjacent countries. in Suidae
Distribution. Main tropical rainforest belt from Senegal and Guinea Bissau to NW Uganda and E DR Congo, reaching as S boundary N Angola (Cabinda); no recent records from Gambia or Chad and its presence is uncertain in S Sudan and SW Ethiopia. As a species that may range widely through gallery forests, it may also occur in adjacent countries.
Distribution. CE & SE Madagascar; until recently restricted to the SC portion of the country's rainforests including Ranomafana and Andringitra national parks, Ambositra-Vondrozo Corridor and isolated forests between and to the E ofthese localities (e.g. Ambolomavo, Ifanadiana, Kianjavato), and one locality N of the Manampatrana River (Evendra); recent surveys have now confirmed its presence in the forests of Torotorofotsy, in the region of Andasibe-Mantadia, and 18 sites in and around the Ankeniheny-Zahamena Corridor, and at five additional sites around the Marolambo forest corridor and as far N as Zahamena National Park, and it extends to near the Midongy du Sud National Park in the S, 670 km S of Zahamena. Reports of large bamboo lemursfitting this species' description have been filtering in from various other remote sites (e.g. Mananara region). in Lemuridae
Distribution. CE & SE Madagascar; until recently restricted to the SC portion of the country's rainforests including Ranomafana and Andringitra national parks, Ambositra-Vondrozo Corridor and isolated forests between and to the E ofthese localities (e.g. Ambolomavo, Ifanadiana, Kianjavato), and one locality N of the Manampatrana River (Evendra); recent surveys have now confirmed its presence in the forests of Torotorofotsy, in the region of Andasibe-Mantadia, and 18 sites in and around the Ankeniheny-Zahamena Corridor, and at five additional sites around the Marolambo forest corridor and as far N as Zahamena National Park, and it extends to near the Midongy du Sud National Park in the S, 670 km S of Zahamena. Reports of large bamboo lemursfitting this species' description have been filtering in from various other remote sites (e.g. Mananara region).
FIGURE 3 in Presence of the Glossosomatidae in Madagascar, with description of two species (Trichoptera)
FIGURE 3. Ecological profile and known locations of Agapetus alarum n. sp. (circles) and Agapetus ranohelae n. sp. (stars) in Madagascar.
FIGURE 2. 2A–2E, Agapetus ranohelae n in Presence of the Glossosomatidae in Madagascar, with description of two species (Trichoptera)
FIGURE 2. 2A–2E, Agapetus ranohelae n. sp.: 2A, wings; 2B, head, meso- and metathorax, dorsal; 2C, left palps, left lateral; 2D–2E, male genitalia: 2D, left lateral; 2E, dorsal. Scale bars: genitalia and head 0.25 mm; wings 1 mm.
FIGURE 1. 1A–1E, Agapetus alarum n in Presence of the Glossosomatidae in Madagascar, with description of two species (Trichoptera)
FIGURE 1. 1A–1E, Agapetus alarum n. sp.: 1A, wings; 1B, head, meso- and meta thorax, dorsal; 1C, genitalia, left lateral; 1D, genitalia, dorsal; 1E, phallic apparatus, left lateral. Scale bars, wings: 1 mm; genitalia: 0.1 mm; head and thorax: 0.5 mm.
Outputs from fitted models across the cross-validation scenarios for 'Space-time species distribution modeling with opportunistic presence-only data: a case study of passerines in a protected area'
<p>Three Zenodo repositories are linked to the preprint <em>Space-time Species Distribution Modeling for Opportunistic Presence-Only Data: A Case Study of Passerines in a Protected Area </em>(Lasgorceux et al., unpublished, <a href="https://hal.science/hal-04616332">https://hal.science/hal-04616332</a>):</p> <ul> <li>Data, scripts and, code (Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12545052">https://doi.org/10.5281/zenodo.12545052</a>)</li> <li>Outputs from fitted models across the cross-validation scenarios (Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12544212">https://doi.org/10.5281/zenodo.12544212</a>)</li> <li>Supplementary information at (Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12541412">https://doi.org/10.5281/zenodo.12541412</a>)</li> </ul> <p>This repository contains the outputs from fitted models across the cross-validation scenarios.</p> <p>In the folder <em>Ouputs_cross_validation</em>, each species is represented by a .RData file, numbered from 1 to 77 (excluding 7, which corresponds to <em>Bombycilla garrulus</em>; see the preprint for details). This dataset is specifically used to generate Figure 1, which shows the AUC of various cross-validation scenarios. To reproduce this figure in R, place all the files in the <em>Results/Fitted_models</em> folder and run the <em>Models_Outputs.R</em> script located in the <em>Results</em> folder of Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12545052">https://doi.org/10.5281/zenodo.12545052.</a></p> <p>Note: These data have been separated due to memory requirements (23.14GB).</p>
Data, scripts and code for 'Space-time species distribution modeling with opportunistic presence-only data: a case study of passerines in a protected area'
<p>Three Zenodo repositories are linked to the preprint <em>Space-time Species Distribution Modeling for Opportunistic Presence-Only Data: A Case Study of Passerines in a Protected Area </em>(Lasgorceux et al., unpublished, <a href="https://hal.science/hal-04616332">https://hal.science/hal-04616332</a>):</p> <ul> <li>Data, scripts, and code (Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12545052">https://doi.org/10.5281/zenodo.12545052</a>)</li> <li>Outputs from fitted models across the cross-validation scenarios (Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12544212">https://doi.org/10.5281/zenodo.12544212</a>)</li> <li>Supplementary information at (Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12541412">https://doi.org/10.5281/zenodo.12541412</a>)</li> </ul> <p>This repository contains data, scripts, and code. It is organized into two main directories: <em>Materials and Methods,</em> and <em>Results</em>.</p> <h2>Materials and Methods</h2> <p>The raw data can be accessed in the <em>Materials_and_Methods/Data directory</em>. The processed data used for modeling is available in <em>Materials_and_Methods/Data_for_modeling/Data_for_modeling.RData</em>. All scripts for data processing are located in <em>Materials_and_Methods/Processing_scripts</em>. The <em>Plots_and_Figures </em>directory<em> </em>includes illustrations of the data used for modeling, such as PCA correlation plots presented in Supplementary information. The main script for running the model for each species is <em>Main_script.R</em>.</p> <h2>Results</h2> <p>The <em>Results</em> directory contains three subdirectories and the script <em>Models_Outputs.R</em>. The <em>Results/Fitted_models</em> directory includes all .RData files with fitted models for each species. The script <em>Models_Outputs.R </em>generates all outputs (Figures, Tables, Numbers) included in the paper and additional results in the Supplementary Information, except for Figure 1 and AUC values. For these, refer to Lasgorceux et al., Zenodo, <a href="https://doi.org/10.5281/zenodo.12544212">https://doi.org/10.5281/zenodo.12544212</a>. The plots are stored in the <em>Results/Plots </em>folder, while <em>Results/RData</em> contains intermediate .RData files created by <em>Models_Outputs.R</em> to manage computational costs.</p>
FIGURE 6 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 6. LineAr regression PloTs of The mAin morPhologiCAl meAsuremenTs ThAT diAgnose The Two new sPeCies of Rhamdia in souThern CDSEB region. Blue CirCle: Rhamdia Aff. quelen; red CirCle: Rhamdia gabrielae; green TriAngle: Rhamdia eurycephala. DAshed lines rePresenT 95% ConfidenCe inTervAl.
FIGURE 3 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 3. MismATCh disTribuTion for: (A) CoAsTAl PlAin GrouP (Rhamdia aff. quelen), (B) MAquiné-MAmPiTubA GrouP (Rhamdia gabrielae), And (C) TubArão GrouP (Rhamdia eurycephala). Coloured line is observed dATA And grAy line is exPeCTed dATA.
FIGURE 9 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 9. Rhamdia eurycephala (UFRGS 19908), holoTyPe, 246.6 mm SL. In dorsAl, lATerAl, And venTrAl views.
FIGURE 2 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 2. HAPloTyPe neTwork using MediAn-Joining for Rhamdia sAmPles for miToChondriAl dATA (mTDNA) And nuCleAr dATA (nDNA). EACh CirCle rePresenTs A single hAPloTyPe And iTs size is ProPorTionAl To iTs frequenCy. DifferenT Colours rePresenT differenT PoPulATions. CoAsTAl PlAin GrouP (Rhamdia Aff. quelen) rePresenTed in blues And grAy, TubArão GrouP (Rhamdia eurycephala) rePresenTed in green, And MAquiné-MAmPiTubA GrouP (Rhamdia gabrielae) rePresenTed in hoT Colours. '
FIGURE 8 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 8. HoloTyPe of Rhamdia gabrielae (UFRGS 20010), holoTyPe, 194 mm SL. In dorsAl, lATerAl, And venTrAl views.
FIGURE 5 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 5. SPeCies Tree wiTh sTrongesT suPPorT ACCording To BAyesiAn PosTerior ProbAbiliTies ProduCed in BeAsT. Numbers on The ToP rePresenT PosTerior ProbAbiliTies And number on The boTTom of Are The divergenCe dATes of The resPeCTive node. The Colourful brAnChes indiCATe The grouPs reCovered in Previous AnAlyses. (A) CoAsTAl PlAin GrouP, (B) MAquiné-MAmPiTubA GrouP (Rhamdia gabrielae) And (C) TubArão GrouP (Rhamdia eurycephala).
FIGURE 7 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 7. SCATTer PloT of Combined sAmPles of Rhamdia gabrielae (red), Rhamdia eurycephala (green) And Rhamdia Aff. quelen (blue) on The seCond And Third PrinCiPAl ComPonenT Axis.
FIGURE 10 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 10. VAriATion in seA level for The lAsT 2 MA shown ACCording To Miller et al. (2011). The red lines rePresenT The PoinTs of divergenCe beTween The lines of RhAmdiA, A) FirsT divergenCe And B) seCond divergenCe
FIGURE 4 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 4. Gene Tree for All DNA dATA seT ProduCed by BAyesiAn AnAlysis in MrBAyes. VAlues on nodes rePresenT BAyesiAn PosTerior ProbAbiliTies: (A) CoAsTAl PlAin GrouP (Rhamdia Aff. quelen), (B) MAquiné-MAmPiTubA GrouP (Rhamdia gabrielae) And (C) TubArão GrouP (Rhamdia eurycephala). TB (green)—rio TubArão; ARA (OrAnge)—uPPer rio ArArAnguá; MP (Pink)— rio MAmPiTubA; TF (red)—rio Três ForquilhAs; MAQ (yellow)—rio MAquiné; TR (dArk blue)—TrAmAndAí lAgoons; ARAB (lighT blue)—lower rio ArArAnguá; CM (grey)—lAgunA dos PATos.
FIGURE 1 in Morphology and molecular data reveal the presence of two new species under Rhamdia quelen (Quoy & Gaimard, 1824) (Siluriformes: Heptapteridae) species complex
FIGURE 1. STudy AreA: 1) rio MAquiné; 2) rio Três ForquilhAs; 3) rio MAmPiTubA; 4) rio ArArAnguá, And 5) rio TubArão. The hydrogrAPhiC bAsins Are surrounded by Coloured lines. Rivers 1–4 form PArT of The TrAmAndAí-MAmPiTubA eCoregion. Red doTs rePresenT ColleCTion loCAliTies of Rhamdia sPeCimens used in geneTiC AnAlyses.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.