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2,142
datasets available to search
ShareScore release 0.9.0
Dataset results
2,142 results for “by contact”
Activity-induced gene expression and long-range enhancer-promoter contacts in cohesin-deficient neurons (NexCre)
GEO Series GSE172427. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Regulatory mechanism of host cell contact-dependent T3SS gene expression in Vibrio parahaemolyticus
GEO Series GSE266863. Vibrio parahaemolyticus. 15 samples. Type: Expression profiling by high throughput sequencing.
Activity-induced gene expression and long-range enhancer-promoter contacts in cohesin-deficient neurons
GEO Series GSE172429. Mus musculus. 69 samples. Type: Expression profiling by high throughput sequencing; Other.
Robust detection of chromosomal contacts from small cell numbers using low-input Capture-C
GEO Series GSE99257. Mus musculus. 44 samples. Type: Other.
Paediatric Bone marrow Mesenchymal Stem cells support acute myeloid leukaemia cell survival and enhance chemoresistance via contact-independent mechanism
GEO Series GSE277382. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Global mapping of polyadenylation site use in proliferating and quiescent (contact-inhibited and serum-starved) cells
GEO Series GSE117337. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide contacts of rDNA units detected by 4C procedure in human genome [old]
GEO Series GSE121413. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Association between Activated Loci of HML-2 Primate-Specific Endogenous Retrovirus and Newly Formed Chromatin Contacts in Human Primordial Germ Cell-like Cells
GEO Series GSE284598. Homo sapiens. 6 samples. Type: Other.
ChromaFold predicts the 3D contact map from single-cell chromatin accessibility
GEO Series GSE246859. Homo sapiens; Mus musculus. 3 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Characterization of transcriptome dynamics in response to contact with host cells [Phase II In Vivo]
GEO Series GSE56092. Mus musculus; Candida albicans. 32 samples. Type: Expression profiling by high throughput sequencing.
Cell-specific microRNA expression patterns in TB patients and household contacts
GEO Series GSE70425. Homo sapiens. 32 samples. Type: Non-coding RNA profiling by array.
Characterization of transcriptome dynamics in response to contact with host cells
GEO Series GSE56093. Homo sapiens; Candida albicans; Mus musculus. 88 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of mouse embryonic fibroblasts upon contact inhibition
GEO Series GSE63535. Mus musculus. 4 samples. Type: Expression profiling by array.
Intrinsic age-dependent changes and cell-cell contacts regulate nephron progenitor lifespan
GEO Series GSE66202. Mus musculus. 91 samples. Type: Expression profiling by high throughput sequencing.
M. tuberculosis response to macrophage intracellular cues - Role of contact, phagosome pH, time, strain
GEO Series GSE8827. Mycobacterium tuberculosis. 8 samples. Type: Expression profiling by array.
RNA polymerase II and PARP1 shape enhancer-promoter contacts [Micro-C]
GEO Series GSE206131. Homo sapiens; Mus musculus. 51 samples. Type: Other.
Analysis of inter-chromosomal rDNA-associated contact changes in K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence of hemin [4C]
GEO Series GSE232392. Homo sapiens. 4 samples. Type: Other.
Transcriptional profiling of irritant contact dermatitis (ICD) in a mouse model identifies specific patterns of gene expression and immune-regulation
GEO Series GSE95317. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
PAXIP1 and STAG2 converge to maintain 3D genome architecture and facilitate promoter/enhancer contacts to enable stress hormone-dependent transcription [CRISPR_screen]
GEO Series GSE237953. Homo sapiens. 6 samples. Type: Other.
Amphiregulin Upregulated in Esophageal Squamous Cell Carcinoma Cells upon Direct Contact with Cancer-Associated Fibroblasts
GEO Series GSE274064. Homo sapiens. 1 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.