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2,142
datasets available to search
ShareScore release 0.9.0
Dataset results
2,142 results for “by contact”
Contact with smooth muscle cells dictates the endothelial transcriptome
GEO Series GSE314128. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease
GEO Series GSE124463. Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Med1 facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination.
GEO Series GSE62969. Mus musculus. 18 samples. Type: Other.
Genome-wide contacts of rDNA units detected by 4C procedure in human genome [old.hs]
GEO Series GSE121417. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Analysis of gene expression and genome-wide rDNA contacts in Drosophila S2 cells
GEO Series GSE145322. Drosophila melanogaster. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
BET inhibition disrupts transcription but retains enhancer-promoter contact
GEO Series GSE139437. Homo sapiens. 77 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
Multi-contact 3C data reveal that the human genome is largely unentangled
GEO Series GSE146945. Homo sapiens. 2 samples. Type: Other.
Trans-regulation of heterochromatin underlies genetic variation in 3D genome contacts IV
GEO Series GSE312897. Mus musculus. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
scRNAseq of co-culture of primary human oligodendrocytes and IL-23 polarized human CD4 T cells in direct contact (contact) versus separated by a porous membrane (insert, no contact)
GEO Series GSE196953. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
PRC1 facilitates stage-specific enhancer-promoter contacts during Drosophila development
GEO Series GSE126985. Drosophila melanogaster. 46 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Cell Density Regulates Neural Stem Cells of Cellular Contact and Differentiation in 3D Hydrogel Culture System
GEO Series GSE239619. Rattus norvegicus. 12 samples. Type: Expression profiling by high throughput sequencing.
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation [HiC_CHiC]
GEO Series GSE84660. Homo sapiens. 12 samples. Type: Other.
Subtle changes in chromatin loop contact propensity are associated with differential gene regulation and expression
GEO Series GSE125540. Homo sapiens. 141 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Regulation of cellular cholesterol distribution via non-vesicular lipid transport at ER-Golgi contact sites
GEO Series GSE240960. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
UMI-4C for quantitative and targeted chromosomal contact profiling
GEO Series GSE76763. Homo sapiens. 53 samples. Type: Other.
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation [UMI-4C]
GEO Series GSE95098. Homo sapiens. 10 samples. Type: Other.
DIAPH1-MFN2 interaction regulates mitochondria-sarcoplasmic reticulum contact and modulates ischemic/hypoxic stress
GEO Series GSE214149. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Identification of enhancer-promoter contacts in squamous cancer cells
GEO Series GSE166234. Homo sapiens. 54 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Intra- and interchromosomal contact mapping reveals the Igh locus has extensive conformational heterogeneity and interacts with B-lineage genes [Hi-C]
GEO Series GSE208600. Mus musculus. 16 samples. Type: Other.
Hot spots of DNA double-strand breaks and genomic contacts of human rDNA units are involved in epigenetic regulation [DSBs]
GEO Series GSE49302. Homo sapiens. 1 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.