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Figure 3 from: Chen W-H, Zhang Y-M, Guo S-W, Zhang Z-R, Chen L, Shui Y-M (2020) Reassessment of Bournea Oliver (Gesneriaceae) based on molecular and palynological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 27-41. https://doi.org/10.3897/phytokeys.157.55254
Figure 3 The Bayes inference (BI) and Maximum likelihood (ML) tree inferred from six cp DNA markers (atpB-rbcL, ndhH-rps15-ycf1, rpl132, trnC-trnD, trnL-F, trnT-trnL) and ITS of the expanded genus Oreocharis s.l. in Gesneriaceae. Note 1) the red clade indicates the position of Bournea in phylogenetic trees; 2) the number of the node respectively indicates posterior probability values in BI and bootstrap values in ML, ※ indicates < 50%.
Figure 1 from: Chen W-H, Zhang Y-M, Guo S-W, Zhang Z-R, Chen L, Shui Y-M (2020) Reassessment of Bournea Oliver (Gesneriaceae) based on molecular and palynological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 27-41. https://doi.org/10.3897/phytokeys.157.55254
Figure 1 The morphology of Bournea sinensis Oliv. (A–E) and B. leiophylla (W. T. Wang) W. T. Wang (F–J). A plant B inflorescence C calyx and disc D stigma E front view of corolla showing the anthers and the style and stamens F plant G inflorescence H pistil and disc I stigma J front view of corolla showing the anthers.
Supplementary material 3 from: Chen W-H, Zhang Y-M, Guo S-W, Zhang Z-R, Chen L, Shui Y-M (2020) Reassessment of Bournea Oliver (Gesneriaceae) based on molecular and palynological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 27-41. https://doi.org/10.3897/phytokeys.157.55254
Figure S2
Supplementary material 1 from: Chen W-H, Zhang Y-M, Guo S-W, Zhang Z-R, Chen L, Shui Y-M (2020) Reassessment of Bournea Oliver (Gesneriaceae) based on molecular and palynological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 27-41. https://doi.org/10.3897/phytokeys.157.55254
Tables S1, S2
Figure 2 from: Chen W-H, Zhang Y-M, Guo S-W, Zhang Z-R, Chen L, Shui Y-M (2020) Reassessment of Bournea Oliver (Gesneriaceae) based on molecular and palynological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 27-41. https://doi.org/10.3897/phytokeys.157.55254
Figure 2 The Bayes inference (BI) and Maximum likelihood (ML) tree inferred from six cp DNA markers (atpB-rbcL, ndhH-rps15-ycf1, rpl132, trnC-trnD, trnL-F, trnT-trnL) of the expanded genus Oreocharis s.l. in Gesneriaceae. Note 1) the red clade indicates the position of Bournea in phylogenetic trees; 2) the number of the node respectively indicates posterior probability values in BI and bootstrap values in ML, ※ indicates < 50%.
Figure 3 from: Tan K, Lu T, Ren M-X (2020) Gesneriaceae in China and Vietnam: Perfection of taxonomy based on comprehensive morphological and molecular evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 7-26. https://doi.org/10.3897/phytokeys.157.34032
Figure 3 Species distributions pattern of the Asian Gesneriaceae. Black circles indicate diversification centers with highest species richness and the red grids are the evolutionary hotspots (at least 25% species are neoendemics). The species distribution information is obtained from http://www.gbif.org. The map was drawn using DIVA-GIS7.5.
Figure 2 from: Tan K, Lu T, Ren M-X (2020) Gesneriaceae in China and Vietnam: Perfection of taxonomy based on comprehensive morphological and molecular evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 7-26. https://doi.org/10.3897/phytokeys.157.34032
Figure 2 Distribution localities of 15 genera of the Asian Gesneriaceae that experienced extensive changes in species compositions.
Figure 5 from: Yang L-H, Wen F, Kong H-H, Sun Z-X, Su L-Y, Kang M (2020) Two new combinations in Oreocharis (Gesneriaceae) based on morphological, molecular and cytological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 43-58. https://doi.org/10.3897/phytokeys.157.32609
Figure 5 Geographical distribution of Oreocharis guileana (green dot), O. baolianis (red triangle) and O. pilosopetiolata (blue square).
Figure 3 from: Yang L-H, Wen F, Kong H-H, Sun Z-X, Su L-Y, Kang M (2020) Two new combinations in Oreocharis (Gesneriaceae) based on morphological, molecular and cytological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 43-58. https://doi.org/10.3897/phytokeys.157.32609
Figure 3 Bayesian (> 50%) tree resulting of the combined nuclear (ITS) and plastid (trnL-F) data matrices. Posterior probability (PP) from the BI analysis are indicated above branches and Bootstrap value (BS) from the ML analysis are indicated below. The asterisk indicates a BS < 50. The dash indicates the topological discordance between ML and Bayesian tree. The two species, O. baolianis and O. guileana, are highlighted in bold.
Figure 1 from: Yang L-H, Wen F, Kong H-H, Sun Z-X, Su L-Y, Kang M (2020) Two new combinations in Oreocharis (Gesneriaceae) based on morphological, molecular and cytological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 43-58. https://doi.org/10.3897/phytokeys.157.32609
Figure 1 Photographs of Oreocharis guileana (A–H), O. pilosopetiolata (I), Boeica ferruginea (J) and Beccarinda tonkinensis (K). A, E, I habit B, C flower D opened corolla, showing stamens and staminodes F pistil G, H, J, K mature fruit.
Figure 4 from: Yang L-H, Wen F, Kong H-H, Sun Z-X, Su L-Y, Kang M (2020) Two new combinations in Oreocharis (Gesneriaceae) based on morphological, molecular and cytological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 43-58. https://doi.org/10.3897/phytokeys.157.32609
Figure 4 Somatic metaphase chromosome spreads of Oreocharis guileana, 2n = 34 (A), O. baolianis, 2n = 34 (B), Beccarinda tonkinensis, 2n = 20 (C) and Boeica stolonifera, 2n = 20 (D). Scale bar: 10 μm.
Figure 2 from: Yang L-H, Wen F, Kong H-H, Sun Z-X, Su L-Y, Kang M (2020) Two new combinations in Oreocharis (Gesneriaceae) based on morphological, molecular and cytological evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 43-58. https://doi.org/10.3897/phytokeys.157.32609
Figure 2 Photographs of Oreocharis baolianis. A–C Habit D, E flower F, H opened corolla, showing stamens and staminodes G anthers I pistil J mature fruit.
Figure 1 from: Tan K, Lu T, Ren M-X (2020) Gesneriaceae in China and Vietnam: Perfection of taxonomy based on comprehensive morphological and molecular evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 7-26. https://doi.org/10.3897/phytokeys.157.34032
Figure 1 Geographical distribution patterns of the 10 genera of the Asian Gesneriaceae that experienced extensive changes in species compositions.
Figure 4 from: Tan K, Lu T, Ren M-X (2020) Gesneriaceae in China and Vietnam: Perfection of taxonomy based on comprehensive morphological and molecular evidence. In: Shui Y-M, Chen W-H, Ren M-X, Wen F, Hong X, Qiu Z-J, Wei Y-G, Kang M (Eds) Taxonomy of Gesneriaceae in China and Vietnam. PhytoKeys 157: 7-26. https://doi.org/10.3897/phytokeys.157.34032
Figure 4 Genera phylogeny with geographical distribution pattern of the Asian Gesneriaceae. The number in the brackets is the species diversity of the genus. Phylogeny tree was redrawn based on Möller and Clark (2013), Middleton et al. (2015), Puglisi et al. (2016), Möller et al. (2016a), Middleton et al. (2018).
Data from: Leme et al. (2020) New status for the Amazonian Hylaeaicum (Bromeliaceae: Bromelioideae) based on neglected morphological traits and molecular evidence. Phytotaxa (doi: 10.11646/phytotaxa.499.1.1)
<p>DNA sequence alignments as well as the input and output files which specify the different data partitioning schemes used for phylogenetic analyses in Leme et al. (2020) New status for the Amazonian Hylaeaicum (Bromeliaceae: Bromelioideae) based on neglected morphological traits and molecular evidence. Phytotaxa (doi: 10.11646/phytotaxa.499.1.1).</p>
FIGURE 4 in Emesis planeca n. comb. (Lepidoptera: Riodinidae): a new combination revealed by molecular evidence with a description of its morphological variation
FIGURE 4. Male labial palpus and latero - ventral view of the head of Emesis planeca n. comb.
Data from: Transgenes in Mexican maize: molecular evidence and methodological considerations for GMO detection in landrace populations
A possible consequence of planting GMOs in centers of crop origin is unintended gene flow into traditional landraces. In 2001, a study reported the presence of the transgenic 35S promoter in maize landraces sampled in 2000 from the Sierra Juarez of Oaxaca, Mexico. Analysis of a large sample taken from the same region in 2003 and 2004 could not confirm the existence of transgenes, thereby casting doubt on the earlier results. These two studies were based on different sampling and analytical procedures and are thus hard to compare. Here we present new molecular data for this region that confirm the presence of transgenes in three of 23 localities sampled in 2001. Transgene sequences were not detected in samples taken in 2002 from nine localities, while directed samples taken in 2004 from two of the positive 2001 localities were again found to contain transgenic sequences. These findings suggest the persistence or re-introduction of transgenes up until 2004 in this area. We address variability in recombinant sequence detection by analyzing the consistency of current molecular assays. We also present theoretical results on the limitations of estimating the probability of transgene detection in samples taken from landraces. The inclusion of a limited number of female gametes, but more importantly, aggregated transgene distributions may significantly lower detection probabilities. Our analytical and sampling considerations help explain discrepancies among different detection efforts, including the one presented here, and provide considerations for the establishment of monitoring protocols to detect the presence of transgenes among structured populations of landraces.
FIGURE 1 in The limits of polymorphism in Liolaemus rothi: Molecular and phenotypic evidence for a new species of the Liolaemus boulengeri clade (Iguanidae, Liolaemini) from boreal Patagonia of Chile
FIGURE 1. Adult male of L. rothi. Photo J.A. Scolaro.
FIGURE 2. A in Morphological and molecular evidence for the occurrence of three Hippocampus species (Teleostei: Syngnathidae) in Brazil
FIGURE 2. A. Hippocampus erectus; B–C. Hippocampus reidi; D. Hippocampus patagonicus.
FIGURE 8 in Phanoceroides Hinton, 1939: description of new species, morphology of larvae, and revised taxonomic position of the genus (Coleoptera: Elmidae) based on molecular evidence
FIGURE 8. Distribution map, showing collection localities of Phanoceroides fernandesi sp. n.
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Allen Brain Atlas
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International Brain Laboratory public data
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OpenNeuro
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