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2,489
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ShareScore release 0.9.0
Dataset results
2,489 results for “Sars-CoV-2”
SARS-CoV-2 infection triggers pro-atherogenic inflammatory responses in human coronary [MAC_FOAM-RNAseq]
GEO Series GSE235433. Homo sapiens. 54 samples. Type: Expression profiling by high throughput sequencing.
Pro-inflammatory activity of SARS-CoV-2 viral peptide-dsRNA complex on human dermal microvascular endothelial cells (HDMVEC)
GEO Series GSE205487. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Global transcriptomic analyses of pluripotent stem cell-derived type II alveolar epithelial-like cells at 1 and 4 days after infection with SARS-CoV-2
GEO Series GSE153277. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Macrophage peroxisomes guide alveolar regeneration and limit post-acute sequelae of SARS-CoV-2 infection (PASC)
GEO Series GSE280545. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Dosing interval is a major factor determining the quality of T cells induced by SARS-CoV-2 mRNA and adenoviral vaccines
GEO Series GSE303984. Homo sapiens. 102 samples. Type: Expression profiling by high throughput sequencing; Other.
Cytotoxic T cells targeting spike glycoprotein are associated with hybrid immunity to SARS-CoV-2
GEO Series GSE223236. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
SARS-CoV-2 Nucleocapsid protein attenuates stress granule formation and interacts directly with mRNAs to impair host stress response (iCLIP-Seq)
GEO Series GSE171008. Homo sapiens. 18 samples. Type: Other.
SARS-CoV-2 ORF3a expression in brain disrupts the autophagy-lysosomal pathway, impairs sphingolipid homeostasis and drives neuropathogenesis
GEO Series GSE224290. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
In severe COVID-19, SARS-CoV-2 induces a chronic, TGF-β-dominated adaptive immune response (Activated B cells, set 1)
GEO Series GSE158030. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
mRNA COVID-19 vaccine elicits potent adaptive immune response without the acute inflammation of SARS-CoV-2 infection [HC]
GEO Series GSE247916. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Gene expression data of alveolosphere/airway organoid and alveolosphere with SARS-CoV-2 or mock infection
GEO Series GSE171430. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
SARS-CoV-2 vs. Homo sapiens BLASTP protein sequence analysis results
<p>SARS-CoV-2 vs. Homo sapiens BLASTP protein sequence analysis results</p>
Haruspex Analysis for SARS-CoV-2 rna_polymerase-nsp7-nsp8 pdb entry 7btf emdb 30178
Haruspex (version 1.0 190116) analysis for SARS-CoV-2 rna_polymerase-nsp7-nsp8 , pdb entry 7btf , emdb 30178. https://onlinelibrary.wiley.com/doi/10.1002/anie.202000421
Using influenza surveillance networks to estimate state-specific prevalence of SARS-CoV-2 in the United States
<p>This repository contains code and data required to reproduce results in our manuscript. </p>
Recombination between SARS-CoV-2 "strains": The possibility of the emergence of more or less virulent "strains" of the virus
<p>To explore the possibility of genomic recombination a total of 2,611 SARS-CoV-2 sequences were mined from the NCBI Virus resource. Multiple sequence alignment and recombination analysis of these sequences were performed using MAFFET and Recombination detection program (RDP) respectively, to determine the emergence of new SARS-CoV-2 viral sequences. We report for the first time, 3 novel recombination events between SARS-CoV-2 sequences, with one event having occurred in 65% of the sequences analysed<em>.</em> Bearing in mind that the prerequisite for recombination is the occurrence of two or more viral sequences in the same reservoir, biological niche or host at the same time, we hypothesized that there was co-infection and or superinfection facilitating recombination in the primary hosts prior to infection of the secondary hosts with the recombinant sequences. Recombination between the SARS-CoV-2 sequences poses the likelihood of the emergence of new more or less virulent “strains” of the virus. We believe that the future of science lies in our ability to be able to use computational based methods to predict the genetic sequences of infectious agents of the next epidemics. The addition of more SARS-CoV-2 sequences has a bearing on our understanding of its origin, hence more SARS-CoV-2 sequences in public databases are needed to elucidate our understanding of this family of viruses.</p>
Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel
<p>Beast2 outputs for the analysis in the submitted manuscript. </p>
Serum-IgG responses to SARS-CoV-2 after mild and severe COVID-19 infection
<ol> <li>SARS-CoV-2 specific serum IgG (AU/ml), as measured by iFlash 1800 chemiluminescent immunoassay (YHLO, China), in 15 patients with severe COVID-19 and 32 patients with mild COVID-19 over >90 days follow-up post symptom onset.</li> <li>SARS-CoV-2 receptor binding domain specific serum IgM, IgG and IgA in samples collected >75 days post symtom onset from 21 patients with mild or severe COVID-19. Measured by in-house ELISA, results presented as AUC of titration curve.</li> </ol>
Immunoblot test results for commercially available antibodies against SARS-CoV-2 spike protein and host proteins relevant to Coronavirus research.
<p>Attached is a description and results of the tested SARS-CoV-2 spike protein and host proteins.</p>
View of an Evolving Pandemic: Changes in the Relationship between Clinical Cases and Levels of SARS-CoV-2 RNA in Colorado Wastewater
<p>This repository contains datasets utilized in the research paper titled "View of an Evolving Pandemic: Changes in the Relationship between Clinical Cases and Levels of SARS-CoV-2 RNA in Colorado Wastewater," published in ACS ES&T Water. The datasets include SARS-CoV-2 wastewater monitoring data alongside COVID caseload data for 23 locations in Colorado over a 22-month period.</p>
SARS-CoV-2-specific cellular and humoral immunity after bivalent BA.4/5 COVID-19-vaccination in previously infected and non-infected individuals
<p>Data accompanying manuscript by Urschel et al. </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.