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3,688 results for “Computer”
Figure 5 in Cranial anatomy of the Triassic rhynchosaur Mesosuchus browni based on computed tomography, with a discussion of the vomeronasal system and its deep history in Reptilia
Figure 5. Digitally isolated rostrum and orbital bones of SAM-PK-6536, Mesosuchus browni, in: A, medial; B, anterolateral; and C, posterior views.
Figure 4 in Cranial anatomy of the Triassic rhynchosaur Mesosuchus browni based on computed tomography, with a discussion of the vomeronasal system and its deep history in Reptilia
Figure 4. Digitally segmented skull of SAM-PK-6536, Mesosuchus browni, in: A, dorsal; and B, ventral views.
Computational Modeling of the Anti-Inflammatory Complexes of IL37
<p>This repository contains IL37 complex structures that are implicated in anti-inflammation.</p>
Computed Tomography and XRF data for core SQB5 (Lower Acorn Woman Lake)
<p>This file contains the Computed Tomography and X-ray Fluorescence data for SBQ5 from Lower Acorn Woman Lake, Oregon. It is used in the publication: </p> <p>Sedimentary record of historical seismicity in a small, southern Oregon lake</p> <p>Authored by: Ann E. Morey, Mark D. Shapley, Daniel G. Gavin, Alan R. Nelson and Chris Goldfinger</p>
Dataset of Easy screen P300 speller brain–computer interface design
<p><span>This study tested an application on 30 subjects, comprising 11 healthy women and 19 healthy men. Brain signals were recorded using a Brain Products V-Amp 16 Channel EEG system, with electrodes positioned according to the International 10-20 system. The signals were filtered using a 1-12 Hz Butterworth band-pass and a 50 Hz Notch filter, then digitized at a sampling frequency of 2 kHz and transferred to a computer for further analysis.</span></p>
Dataset for the plots in paper: 'A Kronecker product accelerated efficient sparse Gaussian Process (E-SGP) for flow emulation' in 'Journal of Computational Physics'
<p>The .xlsx file contains the data used for the plots Fig. 3, 4, 7, 8 and 9 in the paper 'Kronecker product accelerated efficient sparse Gaussian Process (E-SGP) for flow emulation'.</p>
Supplementary tables for the paper: "Comprehensive computational analysis via Adverse Outcome Pathways and Aggregate Exposure Pathways in exploring synergistic effects from radon and tobacco smoke on lung cancer."
<p><strong>Authors</strong>:<br>Thomas Jaylet, Vinita Chauhan, Laura Mezquita, <em>Nadia Boroumand</em><em>, </em>Olivier Laurent, <em>Karine Elihn</em><em>, Lovisa Lundholm</em><em>, </em>Olivier Armant, Karine Audouze</p>
Computing Expected Visiting Times and Stationary Distributions in Markov Chains: Fast and Accurate (Artifact)
<p>This artifact contains the raw data of our experiments as well as scripts and benchmarks to reproduce the experiments.<br>Furthermore, the considered version of [Storm](http://stormchecker.org) is included, which contains our implementation.</p> <p>Please also consider the artifact of the conference paper available at [zenodo](https://zenodo.org/records/10438916) which has been accepted by the TACAS Artifact evaluation committee.</p> <p><br>This artifact contains: <br>`LICENSE`: The license document.<br>`README.md`: The instructions.<br>`raw_data.zip`: The raw data obtained during our experiments<br>`raw_data_with_results.zip`: The raw data, also including the resulting stationary distributions and evts in an explicit format. (84 GB!)<br>`reproduce.zip` contains benchmarks and scripts for reproducing the experiments<br>`storm-0b1cae2a94f06984f3cf4cecf5a5090e9bc71a56.zip` is the exact Storm version we considered.</p>
Dataset related to "An experimental and computational study of the unimolecular-decay reaction of diethyl-substituted Criegee Intermediate (C2H5)2COO"
<p>This dataset was created in a study with the following title "An experimental and computational study of the unimolecular-decay reaction of diethyl-substituted Criegee Intermediate (C2H5)2COO"</p>
Computational modeling and analytical validation of singular geometric effects in fault data using a combinatorial approach - Input and processed data
<p>The archive contains the input and processed data for the companion manuscript.</p> <p>The input data contains XYZ coordinates of points documenting the investigated interfaces. The output datasets contain directional data from applying the combinatorial algorithm to point data sets.</p> <p>We have also included .VTU and .PVSM files for visualization of the geological settings in ParaView.</p>
Implementing amplified MRI in a computational fluid dynamics model of the cerebrospinal fluid
<div> <p>This folder respository contains files to implement measured amplified MRI motion into a CFD model. The files should be imported in FLUENT (Ansys Inc.) in the following order:</p> <ol> <li><strong>setup_case.jou</strong>: journal file containing the commands to setup the CFD model in FLUENT (Ansys Inc.). This file also compiles and loads the UDF <strong>mesh_motion_all_v2023.c</strong>. The UDF is directly based on the code provided in the Github respiratory (<a href="https://pyfsi.github.io/coconut/">CoCoNuT</a>). A define-on-demand function should then be executed to export the unique node ids from FLUENT. </li> <li>Run the Python file <strong>link_node_id_spline_interpolation.ipynb</strong> which returns .dat files for the different timesteps. </li> <li><strong>run_motion.jou</strong>: journal file that reads the .dat files generated in step 2 and applies the mesh motion in the CFD model.</li> </ol> </div>
Measurement-free, scalable and fault-tolerant universal quantum computing
<p>The repository is supporting the publication "Measurement-free, scalable and fault-tolerant universal quantum computing". </p> <p>It includes the data shown in the manuscript as well as the simulation code and circuits that were used to obtain this data. </p>
The data of the mesh used in: Pan M, Zou R, Jüttler B. Algorithms and Data Structures for Cs-smooth RMB-splines of Degree 2s+ 1. Computer Aided Geometric Design, 2024: 102389.
Open the record for dataset details and reuse information.
Acceptance and Development of Quantum Computing in the Netherlands and Germany: Barriers and Remedies from a Multi-stakeholder Perspective}
<p>The repository contains the email sent to the candidates, the interview guide, the complete list of interview transcripts, the qualitative analysis performed with QDA Miner Lite, the code books of the initial and final data analysis, and the excerpts from the interviews.</p>
Supplementary Data for "Exploring structure-function relationships in engineered receptor performance using computational structure prediction"
<p>These data are supplementary data for the manuscript "<strong>Exploring structure-function relationships in engineered receptor performance using computational structure prediction</strong>", which has been submitted for consideration for publication. These data include protein structure predictions used in this study.</p>
Data set and simulation code for "Static workspace computation for underactuated cable-driven parallel robots"
<p>See the attached readme file</p>
Facilitating Sensemaking in Computational Notebooks
Open the record for dataset details and reuse information.
Supplementary Materials for Discovery of Hub Genes and Construction of Competitive Endogenous RNA Network in Human Cytomegalovirus Infection Using Computational and Bioinformatics Tools
<p><span>Table S1: List of targeted genes by 41 differentially expressed microRNAs (DEMs) agreed in Targetscan and miRDB; Table S2: Significant biological process (BP) of 144 genes associated with Human Cytomegalovirus (HCMV); Table S3: Significant cellular components (CC) of 144 genes associated with HCMV; Table S4: Enriched molecular function (MF) of 144 genes associated with HCMV; Table S5: Pathways significantly affected by 144 genes in HCMV; Figure S1: Number of interactions for each gene in protein-protein interaction (PPI) network.</span></p>
Data from: Pleural effusion biomarkers and computed tomography findings in diagnosing malignant pleural mesothelioma: a retrospective study in a single center
In this study, we aimed to examine the clinical value of the pleural effusion (PE) biomarkers, soluble mesothelin-related peptide (SMRP), cytokeratin 19 fragment (CYFRA 21-1) and carcinoembryonic antigen (CEA), and the utility of combining chest computed tomography (CT) findings with these biomarkers, in diagnosing malignant pleural mesothelioma (MPM). We conducted a retrospective cohort study in a single center. Consecutive patients with undiagnosed pleural effusions who underwent PE analysis between September 2014 and August 2016 were reviewed. This study included 240 patients (32 with MPM and 208 non-MPM). SMRP and the CYFRA 21-1/CEA ratio had a sensitivity and specificity for diagnosing MPM of 56.3% and 86.5%, and 87.5% and 74.0%, respectively. Using receiver operating characteristics (ROC) curve analysis of the ability of these markers to distinguish MPM from all other PE causes, the area under the ROC curve (AUC) for SMRP and the CYFRA 21-1/CEA ratio was 0.804 and 0.874, respectively. The sensitivity and specificity of SMRP combined with the CYFRA 21-1/CEA ratio were 93.8% and 64.9%, respectively. The sensitivity of the combination of SMRP, the CYFRA 21-1/CEA ratio, and the presence of Leung's criteria (a chest CT finding that is suggestive of malignant pleural disease) was 93.8%. In conclusion, the combined PE biomarkers had a high sensitivity for diagnosing MPM, although the addition of chest CT findings did not improve the sensitivity of SMRP combined with the CYFRA 21-1/CEA ratio. Combination of these biomarkers helped to rule out MPM effectively among patients at high risk of suffering MPM and would be valuable especially for old frail patients who have difficulty in undergoing invasive procedures such as thoracoscopy.
Data from: Computer simulations show that Neanderthal facial morphology represents adaptation to cold and high energy demands, but not heavy biting
Three adaptive hypotheses have been forwarded to explain the distinctive Neanderthal face: 1) an improved ability to accommodate high anterior bite forces, 2) more effective conditioning of cold and/or dry air, and, 3) adaptation to facilitate greater ventilatory demands. We test these hypotheses using three-dimensional models of Neanderthals, modern humans, and a close outgroup (H. heidelbergensis), applying finite element analysis (FEA) and computational fluid dynamics (CFD). This is the most comprehensive application of either approach applied to date and the first to include both. FEA reveals few differences between H. heidelbergensis, modern humans and Neanderthals in their capacities to sustain high anterior tooth loadings. CFD shows that the nasal cavities of Neanderthals and especially modern humans condition air more efficiently than does that of H. heidelbergensis, suggesting that both evolved to better withstand cold and/or dry climates than less derived Homo. We further find that Neanderthals could move considerably more air through the nasal pathway than could H. heidelbergensis or modern humans, consistent with the propositions that, relative to our outgroup Homo, Neanderthal facial morphology evolved to reflect improved capacities to better condition cold, dry air, and, to move greater air volumes in response to higher energetic requirements.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.