Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,185
datasets available to search
ShareScore release 0.9.0
Dataset results
2,185 results for “integrated taxonomy”
Figures 25-33 from: Jordal BH (2024) Integrated taxonomy, biology and biogeography of the Afrotropical genus Xyloctonus (Coleoptera, Curculionidae, Scolytinae). Deutsche Entomologische Zeitschrift 71(1): 67-84. https://doi.org/10.3897/dez.71.116185
Figures 25-33 Dorsal, lateral and front view of holotype of X. pubifer (25, 28, 31); paratype of X. subcostatus (26, 29, 32); paratype of X. striatus (synonym of X. subcostatus) (27, 30, 33).
Figures 7-15 from: Jordal BH (2024) Integrated taxonomy, biology and biogeography of the Afrotropical genus Xyloctonus (Coleoptera, Curculionidae, Scolytinae). Deutsche Entomologische Zeitschrift 71(1): 67-84. https://doi.org/10.3897/dez.71.116185
Figures 7-15 Dorsal, lateral and front view of X. scolytoides (7, 10, 13); paralectotype of X. latus (synonym of X. scolytoides) (8, 11, 14); holotype of X. niger (9, 12, 15).
Figures 1-5 from: Jordal BH (2024) Integrated taxonomy, biology and biogeography of the Afrotropical genus Xyloctonus (Coleoptera, Curculionidae, Scolytinae). Deutsche Entomologische Zeitschrift 71(1): 67-84. https://doi.org/10.3897/dez.71.116185
Figures 1-5 Posterior view of elytral declivity in 1.Xyloctonus quadridens; 2.X. maculatus; 3.X. subcostatus (paratype of X. striatus); 4.X. pubifer; 5.X. scolytoides (paralectotype of X. latus). Black arrows points at the shallow furrow on the posterior side of the metatibiae, similar to mesotibiae. White arrow points to the impression of the metaventrite which receives the metafemur. Yellow arrows point at elytral interstriae 9, which in Figs 1–4 runs to the elytral sutures and blocks interstriae 1–8 from reaching elytral apex; in X. scolytoides (Fig. 5) all interstriae reach the posterior margin of the elytra.
Figures 16-24 from: Jordal BH (2024) Integrated taxonomy, biology and biogeography of the Afrotropical genus Xyloctonus (Coleoptera, Curculionidae, Scolytinae). Deutsche Entomologische Zeitschrift 71(1): 67-84. https://doi.org/10.3897/dez.71.116185
Figures 16-24 Dorsal, lateral and front view of holotype of X. opacus (16, 19, 22); paratype of X. punctipennis (17, 20, 23); X. biseriatus (18, 21, 24).
Figure 6 from: Jordal BH (2024) Integrated taxonomy, biology and biogeography of the Afrotropical genus Xyloctonus (Coleoptera, Curculionidae, Scolytinae). Deutsche Entomologische Zeitschrift 71(1): 67-84. https://doi.org/10.3897/dez.71.116185
Figure 6 Reconstruction of ancestral geographic areas in RASP using the BBM method on a Beast estimated time-tree. The most likely ancestral area is noted by a letter in centre of each pie diagram, with alternative states coloured according to their likelihood proportions. The map inserted shows the approximate extent of relevant Afrotropical subregions sensuLinder et al. (2012).
Supplementary material 1 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Additional information
Figure 6 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 6 Scatter plot of discriminant analysis of the genus Cultellus. Each colour of the dot in the principal component analysis diagram represents a species.
Figure 3 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 3 Cultellus exilis sp. nov. (paratypes) A–D. MBM264485; E–H. MBM264488; I–L. MBM264497; M–P. MBM264500; Q–T. MBM229040. Scale bars: 10 mm.
Figure 2 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 2 Cultellus exilis sp. nov. (holotype) A, B. MBM229032, L = 34.66 mm; C, D. Exterior views of left and right valve; E, F. Interior views of left and right valve; H. Hinge of left valve; I. Hinge of right valve; J. Internal radial rib of left valve.
Figure 5 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 5 Principal component and thin plate spline analyses, based on outlines of the genus Cultellus. A. The extreme distortion of the outlines in the negative of PC2; B. The extreme distortion of the outlines in the positive of PC1; C. The extreme distortion of the outlines in the negative of PC1; D. The extreme distortion of the outlines in the positive of PC2. Each colour of the dot in the principal component analysis diagram represents a species.
Figure 8 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 8 Phylogenetic tree inferred by Bayesian Inference analysis (BI) and Maximum Likelihood (ML), based on concatenated dataset of COI, 16S and 28S genes. Bayesian posterior probability and Maximum Likelihood bootstrap scores (left and right, respectively. "-" represents different branch position on ML and BI trees) are shown above the branch.
Figure 1 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 1 The location of Cultellus exilis sp. nov. in the South China Sea. The red dot represents holotype and the blue dots represent paratypes.
Figure 7 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 7 Phylogenetic tree obtained by the Maximum Likelihood (ML), based on COI gene sequences. Numbers adjacent to nodes refer to ML bootstrap scores (BS < 50 represented by "*"). The results of three species delimitation methods are shown on the right of the figure (Each species is represented by a single colour).
Figure 4 from: Yu Y, Jiao Y, Zhang J (2024) Description of a new species of the genus Cultellus Schumacher, 1817 (Bivalvia, Pharidae) from the South China Sea, based on integrative taxonomy. Zoosystematics and Evolution 100(2): 425-436. https://doi.org/10.3897/zse.100.113972
Figure 4 A.Cultellus attenuatus Dunker, 1862. Two syntypes, NHMUK 20240145: L = 54.7 mm, H = 13.9 mm; L = 45.2 mm, H = 12.2 mm; B.Cultellus hanleyi Dunker, 1862. One syntype, NHMUK 1986103: L = 54.1 mm, H = 16.1 mm; C.Cultellus subellipticus Dunker, 1862. One syntype, NHMUK 20240146: L = 46.3mm, H = 16.0 mm; D.Cultellus vitreus Dunker, 1862. One syntype, NHMUK 20240147: L = 39.5 mm, H = 10.9 mm; E.Cultellus maximus (Gmelin, 1791). MBM264615: L = 33.6 mm, H = 11.3 mm; F.Cultellus exilis sp. nov. MBM229032: L = 34.66 mm, H = 10.35 mm.
Integrating UCE phylogenomics with traditional taxonomy reveals a trove of New World Syscia species (Formicidae, Dorylinae)
<p>The ant genus <em>Syscia</em> is part of the cryptic ant fauna inhabiting leaf litter and rotten wood in the Asian and American tropics. It is a distinct clade within the Dorylinae, the subfamily from which army ants arose. Prior to this work the genus comprised seven species, each known from a single or very few collections. Extensive collecting in Middle America revealed an unexpected and challenging diversity of morphological forms. Locally distinct forms could be identified at many sites but assignment of specimens to species spanning multiple sites was problematic. To improve species delimitation, Ultra-Conserved Element (UCE) phylogenomic data were sequenced for all forms, both within and among sites, and a phylogeny was inferred. Informed by phylogeny, species delimitation was based on monophyly, absence of within-clade sympatry, and a subjective degree of morphological uniformity. UCE phylogenomic results for 130 specimens were complemented by analysis of mitochondrial COI (DNA barcode) data for an expanded taxon set. The resulting taxonomy augments the number of known species in the New World from 3 to 57. We describe and name 31 new species, and 23 species are assigned morphospecies codes pending improved specimen coverage. Queens may be fully alate or brachypterous, and there is a wide variety of intercaste female forms. Identification based on morphology alone is very difficult due to continuous character variation and high similarity of phylogenetically distant species. An identification aid is provided in the form of a set of distribution maps and standard views, with species ordered by size.</p>
Figure 12 from: Berggren K, Aarvik L, Huemer P, Lee KM, Mutanen M (2022) Integrative taxonomy reveals overlooked cryptic diversity in the conifer feeding Batrachedra pinicolella (Zeller, 1839) (Lepidoptera, Batrachedridae). ZooKeys 1085: 165-182. https://doi.org/10.3897/zookeys.1085.76853
Figure 12 Maximum-likelihood tree inferred from the ddRAD SNP data. Bootstrap support values are indicated above the branches and only the values > 50% are shown. The barplot shows the assignments of individuals into two genetic clusters, the red clusters referring to Batrachedra confusella, the blue clusters to B. pinicolella. Each bar represents one individual and colours represent the proportion of the individuals that belong to each of the genetic cluster.
Figure 11 from: Berggren K, Aarvik L, Huemer P, Lee KM, Mutanen M (2022) Integrative taxonomy reveals overlooked cryptic diversity in the conifer feeding Batrachedra pinicolella (Zeller, 1839) (Lepidoptera, Batrachedridae). ZooKeys 1085: 165-182. https://doi.org/10.3897/zookeys.1085.76853
Figure 11 Neighbor-joining visualization of genetic divergences of DNA barcode fragment of COI gene within and between European species of Batrachedra. The scale indicates 1% genetic divergence as calculated under Kimura 2 parameter model for nucleotide substitution.
Figures 9-10 from: Berggren K, Aarvik L, Huemer P, Lee KM, Mutanen M (2022) Integrative taxonomy reveals overlooked cryptic diversity in the conifer feeding Batrachedra pinicolella (Zeller, 1839) (Lepidoptera, Batrachedridae). ZooKeys 1085: 165-182. https://doi.org/10.3897/zookeys.1085.76853
Figures 9-10 Female genitalia of Batrachedra9B. confusella sp. nov., genitalia slide NHMO 3937 10B. pinicolella, genitalia slide NHMO 3961.
Figures 5-8 from: Berggren K, Aarvik L, Huemer P, Lee KM, Mutanen M (2022) Integrative taxonomy reveals overlooked cryptic diversity in the conifer feeding Batrachedra pinicolella (Zeller, 1839) (Lepidoptera, Batrachedridae). ZooKeys 1085: 165-182. https://doi.org/10.3897/zookeys.1085.76853
Figures 5-8 Male genitalia of Batrachedra5B. confusella sp. nov., genitalia slide NHMO 3899 6B. confusella sp. nov., distal end of phallus, genitalia slide NHMO 3899 7B. pinicolella, genitalia slide NHMO 3891 8B. pinicolella, distal end of phallus, genitalia slide NHMO 3892.
Figures 1-4 from: Berggren K, Aarvik L, Huemer P, Lee KM, Mutanen M (2022) Integrative taxonomy reveals overlooked cryptic diversity in the conifer feeding Batrachedra pinicolella (Zeller, 1839) (Lepidoptera, Batrachedridae). ZooKeys 1085: 165-182. https://doi.org/10.3897/zookeys.1085.76853
Figures 1-4 Adults and labels of Batrachedra1 lectotype Cosmopteryx pinicolella Zeller, 1839 (NHMUK; copyright Trustees of the Natural History Museum, London) 2 labels of lectotype 3 holotype of Batrachedra confusella sp. nov. 4 adult of Batrachedra pinicolella. Scale: 10 mm.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.