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Text-fig. 5. Reconstruction drawing of Pterigophycos sp. thallus growing on a rock surface (blades slightly simplified, details deemphasized). in A Whole-Plant Specimen Of The Marine Macroalga Pterigophycos From The Eocene Of Bolca (Veneto, N-Italy)
Text-fig. 5. Reconstruction drawing of Pterigophycos sp. thallus growing on a rock surface (blades slightly simplified, details deemphasized).
Text-fig. A2. a: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium E00824885). b: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium E00824885). c: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium E00824885 detail of (a)). d, e: Ulmus elliptica K.KOCH, 1849 (herbarium E00034393). f, g: Ulmus lancifolia ROXB., 1814, nom. inval. (herbarium NMNH03413489). h: Ulmus lancifolia ROXB., 1814, nom. inval. (herbarium NMNH03413488). Asterisks indicate different types of asymmetric leaf base. Scale bars 50 mm (a, d, e, f), 10 mm (b, c, g, h). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome
Text-fig. A2. a: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium E00824885). b: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium E00824885). c: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium E00824885 detail of (a)). d, e: Ulmus elliptica K.KOCH, 1849 (herbarium E00034393). f, g: Ulmus lancifolia ROXB., 1814, nom. inval. (herbarium NMNH03413489). h: Ulmus lancifolia ROXB., 1814, nom. inval. (herbarium NMNH03413488). Asterisks indicate different types of asymmetric leaf base. Scale bars 50 mm (a, d, e, f), 10 mm (b, c, g, h).
Text-fig. A3. a: Leaf morphotype 1 Tebano MSF SG 049. b: Leaf morphotype 2 Oriolo MSF 631. c: Leaf morphotype 3 Oriolo MSF n.n. d, f: Leaf morphotype 4. d: Oriolo MSF 891. e: Oriolo MSF 856. f: Oriolo MSF 858. g: Leaf morphotype 5 Oriolo MSF 783. h: Leaf morphotype 6 Oriolo MSF 952. i: Leaf morphotype 7 Oriolo MSF 862. j, l: Leaf morphotype 8. j: Oriolo MSF 912. k: Oriolo MSF 662. l: Oriolo MSF 662-1. m: Leaf morphotype 9 Oriolo MSF 715. n: Leaf morphotype 10 Oriolo MSF 716. o: Leaf morphotype 11, overview and detail of margin Oriolo MSF 880. p–z: Various rosaceous leaves/ leaflets. p: Oriolo MSF 943. q: Oriolo MSF 890. r: Oriolo MSF 950. s: Oriolo MSF 958. t: Oriolo MSF 966 aff. Sorbus. u: Oriolo MSF 956. v: Oriolo MSF 961. w: Oriolo MSF 962. x: Oriolo MSF 874. y: Oriolo MSF 883. z: Oriolo MSF 960. in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome
Text-fig. A3. a: Leaf morphotype 1 Tebano MSF SG 049. b: Leaf morphotype 2 Oriolo MSF 631. c: Leaf morphotype 3 Oriolo MSF n.n. d, f: Leaf morphotype 4. d: Oriolo MSF 891. e: Oriolo MSF 856. f: Oriolo MSF 858. g: Leaf morphotype 5 Oriolo MSF 783. h: Leaf morphotype 6 Oriolo MSF 952. i: Leaf morphotype 7 Oriolo MSF 862. j, l: Leaf morphotype 8. j: Oriolo MSF 912. k: Oriolo MSF 662. l: Oriolo MSF 662-1. m: Leaf morphotype 9 Oriolo MSF 715. n: Leaf morphotype 10 Oriolo MSF 716. o: Leaf morphotype 11, overview and detail of margin Oriolo MSF 880. p–z: Various rosaceous leaves/ leaflets. p: Oriolo MSF 943. q: Oriolo MSF 890. r: Oriolo MSF 950. s: Oriolo MSF 958. t: Oriolo MSF 966 aff. Sorbus. u: Oriolo MSF 956. v: Oriolo MSF 961. w: Oriolo MSF 962. x: Oriolo MSF 874. y: Oriolo MSF 883. z: Oriolo MSF 960.
Text-fig. 4: Pterigophycos sp., details of specimen in Text-fig. 3a. a: Blades B5–7; b: Close-up of (a), focusing on attachment of small blades B5–7 to holdfast structure; c: Detail of holdfast with several linear elements extending from proximal portion; d: Detail of blade B2, showing midrib and spathulate lamina segments; e: Detail of blade B1, showing lowermost, smallest lamina segments; f: tiny bivalve shell on stipe of blade B1, scale bar = 5 mm; g: Detail of blade B2, showing proximal beginning of lamina segmentation. Scale bars = 1 cm unless otherwise stated. in A Whole-Plant Specimen Of The Marine Macroalga Pterigophycos From The Eocene Of Bolca (Veneto, N-Italy)
Text-fig. 4: Pterigophycos sp., details of specimen in Text-fig. 3a. a: Blades B5–7; b: Close-up of (a), focusing on attachment of small blades B5–7 to holdfast structure; c: Detail of holdfast with several linear elements extending from proximal portion; d: Detail of blade B2, showing midrib and spathulate lamina segments; e: Detail of blade B1, showing lowermost, smallest lamina segments; f: tiny bivalve shell on stipe of blade B1, scale bar = 5 mm; g: Detail of blade B2, showing proximal beginning of lamina segmentation. Scale bars = 1 cm unless otherwise stated.
Text-fig. 3. a: Pterigophycos sp., whole-plant specimen, coll. No. 22.116, larger blades denoted B1–4 (for details, see text), scale bar = 2 cm; b: Close-up of blades B1 and B2, which resemble P. spectabilis A.MASSAL. and P. canossae A.MASSAL., respectively; c: Closeup of blade B3 resembling P. canossae; d: Close-up of blade B4 resembling P. gazolanus A.MASSAL. or Laminarites irideaephyllus A.MASSAL. Scale bars = 1 cm unless otherwise stated. in A Whole-Plant Specimen Of The Marine Macroalga Pterigophycos From The Eocene Of Bolca (Veneto, N-Italy)
Text-fig. 3. a: Pterigophycos sp., whole-plant specimen, coll. No. 22.116, larger blades denoted B1–4 (for details, see text), scale bar = 2 cm; b: Close-up of blades B1 and B2, which resemble P. spectabilis A.MASSAL. and P. canossae A.MASSAL., respectively; c: Closeup of blade B3 resembling P. canossae; d: Close-up of blade B4 resembling P. gazolanus A.MASSAL. or Laminarites irideaephyllus A.MASSAL. Scale bars = 1 cm unless otherwise stated.
Text-fig. 2. Salicaceae (a–g), Cannabaceae (h–n), cf. Betulaceae (o–r). a–g: Saxifragispermum, USNM PAL 772341. Scale bar = 5 mm except as indicated. a–b: Lateral, c: apical, and d: basal views of fruit, reflected light, palladium coated; apex at top of (a, b). e: Equatorial transverse section reflected light; arrows indicate presumed seeds, scale bar = 2 mm. f: Detail of locule contents extracted from (e), transmitted light, scale bar = 200 Μm. g: Interwoven trichomes or fibers from locule, transmitted light, scale bar = 5 Μm. h–j: Celtis. h, i: USNM PAL 772342, reflected light, palladium coated, scale bar = 5 mm. h: Lateral view parallel with plane of dehiscence. i: Lateral view perpendicular to plane of dehiscence. j: DMNH EPI.47809, Celtis in lateral view; showing reticulate sculpture and the vertically-oriented, plane of dehiscence (arrow), scale bar = 5 mm. k–m: Aphananthe. USNM PAL 772344, reflected light, palladium coated, scale bar = 5 mm. k: Apical view, note triangular cross section and apical plug (arrow). l: Lateral view, apex up. m: Lateral view at 90° to (l). n: Detail of cellular pattern at surface of endocarp, scale bar = 0.5 mm. o–r: in The Early Middle Eocene Wagon Bed Carpoflora Of Central Wyoming, U.S.A.
Text-fig. 2. Salicaceae (a–g), Cannabaceae (h–n), cf. Betulaceae (o–r). a–g: Saxifragispermum, USNM PAL 772341. Scale bar = 5 mm except as indicated. a–b: Lateral, c: apical, and d: basal views of fruit, reflected light, palladium coated; apex at top of (a, b). e: Equatorial transverse section reflected light; arrows indicate presumed seeds, scale bar = 2 mm. f: Detail of locule contents extracted from (e), transmitted light, scale bar = 200 Μm. g: Interwoven trichomes or fibers from locule, transmitted light, scale bar = 5 Μm. h–j: Celtis. h, i: USNM PAL 772342, reflected light, palladium coated, scale bar = 5 mm. h: Lateral view parallel with plane of dehiscence. i: Lateral view perpendicular to plane of dehiscence. j: DMNH EPI.47809, Celtis in lateral view; showing reticulate sculpture and the vertically-oriented, plane of dehiscence (arrow), scale bar = 5 mm. k–m: Aphananthe. USNM PAL 772344, reflected light, palladium coated, scale bar = 5 mm. k: Apical view, note triangular cross section and apical plug (arrow). l: Lateral view, apex up. m: Lateral view at 90° to (l). n: Detail of cellular pattern at surface of endocarp, scale bar = 0.5 mm. o–r:
Udayagiri, Madhya Pradesh. Cave 5, Varāha, detail.
<p>Udayagiri, Madhya Pradesh. Cave 5, Varāha, detail.</p>
FIGURE 5 in Comparison of methods: Micro-CT visualization method and epoxy cast-embedding reveal hidden details of bioerosion in the tube walls of Cretaceous polychaete worms
FIGURE 5. Pyrgopolon (Septenaria) cf. tricostata (Goldfuss, 1841), longitudinal section of a tube from Kaňk "Na Vrších", no. NM O8728. A. SEM image of the resulting cast providing a three-dimensional view of three bi-camerate specimens of Entobia isp. and numerous shafts of Trypanites isp. cut by the longitudinal boring Maeandropolydora isp.; galleries are duplicated, more or less parallel, partially touching each other. B. The same view to the specimen by using micro-CT. C. detail of the resin cast showing a pair of bi-camerate Entobia isp. D. micro-CT scan from the same view, details of Entobia chambers are below the lower limit of micro-CT resolution.
ANIMATION 1 in Comparison of methods: Micro-CT visualization method and epoxy cast-embedding reveal hidden details of bioerosion in the tube walls of Cretaceous polychaete worms
ANIMATION 1. Three-dimensional animation of specimen Cementula sp., a coiled tube, no. CZ2, from Velim locality, the Czech Republic.
FIGURE 3 in Comparison of methods: Micro-CT visualization method and epoxy cast-embedding reveal hidden details of bioerosion in the tube walls of Cretaceous polychaete worms
FIGURE 3. Cementula sp., a coiled tube, no. CZ2, from Velim. A–C. Scanning electron microscope images of resin cast, B–C insets in A showing microbioerosion beneath D–F. Micro-CT images. A, D and E. Identical views using different methods. B. SEM image of resin cast shows branching stolons of Iramena isp., below lower limit of micro-CT resolution. C. Detail showing microbioerosion beneath tube surface and shaft incompletely filled with epoxy resin. D. 2D section through both tubes. E. Semi-transparent rendering of 2D section. F. Volume reproduction image, 3D view to smooth inner surfaces of the tubes.
FIGURE 1. A in Comparison of methods: Micro-CT visualization method and epoxy cast-embedding reveal hidden details of bioerosion in the tube walls of Cretaceous polychaete worms
FIGURE 1. A. Simplified geographic map of Bohemian Cretaceous Basin indicating locations of the studied sites (in rectangle). B. Geographic position of nearshore deposits at Velim, Kaňk "Na Vrších" and Kamajka, where samples were taken (black pentangles).
FIGURE 4 in Comparison of methods: Micro-CT visualization method and epoxy cast-embedding reveal hidden details of bioerosion in the tube walls of Cretaceous polychaete worms
FIGURE 4. Placostegus zbyslavus (Ziegler, 1984), longitudinal section of a tube from Kamajka near Chotusice, no. NM O8727. A. SEM image of the resin cast showing a high degree of silicification that led to incomplete dissolution of the tube wall in HCl; image shows only indeterminate non-branching shafts. B. The same view of the specimen using micro-CT clearly shows relatively frequent Maeandropolydora isp. and shallow shafts of Trypanites isp.
FIGURE 2 in Comparison of methods: Micro-CT visualization method and epoxy cast-embedding reveal hidden details of bioerosion in the tube walls of Cretaceous polychaete worms
FIGURE 2. Stratigraphic provenance of serpulid tubes from Velim, Kamajka, and Kaňk. 1 - crystalline basement; 2 - basal Cenomanian conglomerate; 3 - redeposited Turonian conglomerate; 4 - bioclastic limestone with calcitic-clayey matrix; 5 - organodetritic clayey limestone; 6 - marly siltstone with intercalations of phosphatized horizon; 7 - sponge 'meadows'; 8 - limestone layer with nodule-like bodies; 9 - calcareous claystone (modified from Košťák et al., 2010; Kočí, 2012). Full filled circles indicate position of serpulid fauna.
ANIMATION 2 in Comparison of methods: Micro-CT visualization method and epoxy cast-embedding reveal hidden details of bioerosion in the tube walls of Cretaceous polychaete worms
ANIMATION 2. Three-dimensional animation of specimen Placostegus zbyslavus (Ziegler, 1984), from Kamajka locality, the Czech Republic, no. NM O8727.
OPTIMADE compliant results database + Detailed input/outputs of VASP calculations as BSON mongodump and JSON formats
<p>This dataset that contains the results presented in the journal article entitled "SurfFlow: High-throughput surface energy calculations for arbitrary crystals" that was published in Volume 234 of the Elsevier journal Computational Materials Science.</p> <p>The dataset consists of a dump of a MongoDB database with two collections; an OPTIMADE compliant results collection, and a supplementary collection that contains detailed data on the VASP calculations performed. Each entry in the OPTIMADE-compliant results collection contains an id, and every VASP calculation that was involved in the calculation of surface energies of that entry can be found by filtering for the same id matching the "optimade_id" in the VASP data collection.</p> <p>The data is served in two different formats; a BSON mongodump folder that can be restored to a MongoDB instance using the mongorestore tool, and additionally as simple .json files. The contents are identical and the users are encouraged to choose the format that is convenient to them.</p> <p>Here's a simple tree-view of the uncompressed attachment:</p> <p>./surfflow-bson/surfflow:<br>2.2M optimade.bson.gz<br> 153 optimade.metadata.json.gz<br> 40M vasp_data.bson.gz<br> 154 vasp_data.metadata.json.gz</p> <p>./surfflow-json:<br> 27M optimade.json<br>346M vasp_data.json</p>
Fig. 2. Detailed stratigraphic column from Cucullaea I in A new zoroasterid asteroid from the Eocene of Seymour Island, Antarctica
Fig. 2. Detailed stratigraphic column from Cucullaea I Allomember, La Meseta Formation. Abbreviations: C, conglomerate; cS, coarse sandstone; fS, fine sandstone; mS, medium sandstone. Scale bars 100 mm.
Figure 2b. Detail from Fig. 2a in Clarifying the nomenclature of Pomarea species (Monarchidae) from the Society Islands
Figure 2b. Detail from Fig. 2a: 'Prêtre after Garnot'. Thus Garnot was the first to paint this. All images reproduced from Pl. 17 of the volume of the Voyage de la Coquille accessible at the Biodiversity Heritage Library (www.biodiversitylibrary.org/item/119447#page/43/ mode/1up).
DIETxPOSOME: a FAIR database detailing food contaminants occurrence in selected foods
<p>The DIETxPOSOME FAIR database provides detailed quantification of 73 contaminants, including 4 heavy metals, 18 polycyclic aromatic hydrocarbons (PAHs), 10 pesticides, 29 mycotoxins, and 12 heterocyclic aromatic amines (HAAs), in 16 food items across various food groups (cereals, vegetables, fruits, starchy roots, dairy products, nuts, meat, eggs, fish, legumes and vegetable oils). Data was obtained through a combination of literature extraction protocols and machine learning.</p> <p>A list of pertinent research articles on food contaminants in globally significant food items was sourced from PubMed. Machine learning enabled the automatic filtering of these papers (<a href="../records/7826130">https://zenodo.org/records/7826130</a>), which were subjected to a manual evaluation. Subsequently, specific foods (wheat, maize, beef, cheese, pasta, potatoes, carrots, rice, bread, chicken eggs, peanuts, beans, cabbage, apple, olive oil, and salmon) were selected based on their comprehensive contaminant profiles. Information was extracted from 145 relevant articles of the 151 research articles pertaining to the selected food items. Following extraction, the data was confirmed and evaluated by three reviewers, adhering to stringent criteria. </p> <p>The food items in the DIETxPOSOME FAIR database can be integrated into complex dietary patterns in an experimental context, for example, aligned with the EAT-Lancet Commission Reference Diet for Healthy and Sustainable Food Systems. This framework allows the simulation of real-world dietary exposure or worst-case scenarios, facilitating comprehensive risk assessment of unavoidable food contaminants.</p> <p> </p>
Рис. 1. Seychelliceps cooperi comb. nov., ЗММУ № 23252, 155 мм SL (1, 3, 5, 7, 9) и Suggrundus macracanthus, ИОРАН, Вьетнам, заΛ. Нячанг, 124 мм SL (2, 4, 6, 8, 10, 11), ΑетаΛи строения: 1, 2 — верхний преоперкуΛярный шип; 3, 4 — гребешки и/иΛи бугорки костей крыши черепа в загΛазничной части; 5, 6 — заΑний конец премаксиΛΛярных зубных Λент; 7, 8 — форма небных зубных Λент; 9, 10 — чешуи преΑорсаΛьной обΛасти; 11 — восьмая чешуйка боковой Λинии (окрашена аΛизарином красным S). Масштаб: 1, 2, 4, 7, 8 — 2,5 мм (7, 8 — Λинейка общая); 3 — 5 мм; 5, 9, 10 — 3 мм; 6 — 2 мм; 11 — 0,3 мм Fig. 1. Seychelliceps cooperi comb. nov., ZMMU no. 23252, 155 mm SL (1, 3, 5, 7, 9) and Suggrundus macracanthus, IORAS, Vietnam, Nha Trang Bay, 124 mm SL (2, 4, 6, 8, 10, 11), details: 1, 2 — uppermost preopercular spine; 3, 4 — crests and/or tubercles of cranial roofing bone in postorbital portion of head; 5, 6 — posterior ending of premaxillary tooth band; 7, 8 — shape of tooth band on palatine; 9, 10 — predorsal scales; 11 — eighth scale of lateral line (stained by alizarine red S). Scale bars: 1, 2, 4, 7, 8 — 2.5 mm (7, 8 — common bar); 3 — 5 mm; 5, 9, 10 — 3 mm; 6 — 2 mm; 11 — 0.3 mm in Of The Genus (Teleostei: Scorpaeniformes)
Рис. 1. Seychelliceps cooperi comb. nov., ЗММУ № 23252, 155 мм SL (1, 3, 5, 7, 9) и Suggrundus macracanthus, ИОРАН, Вьетнам, заΛ. Нячанг, 124 мм SL (2, 4, 6, 8, 10, 11), ΑетаΛи строения: 1, 2 — верхний преоперкуΛярный шип; 3, 4 — гребешки и/иΛи бугорки костей крыши черепа в загΛазничной части; 5, 6 — заΑний конец премаксиΛΛярных зубных Λент; 7, 8 — форма небных зубных Λент; 9, 10 — чешуи преΑорсаΛьной обΛасти; 11 — восьмая чешуйка боковой Λинии (окрашена аΛизарином красным S). Масштаб: 1, 2, 4, 7, 8 — 2,5 мм (7, 8 — Λинейка общая); 3 — 5 мм; 5, 9, 10 — 3 мм; 6 — 2 мм; 11 — 0,3 мм Fig. 1. Seychelliceps cooperi comb. nov., ZMMU no. 23252, 155 mm SL (1, 3, 5, 7, 9) and Suggrundus macracanthus, IORAS, Vietnam, Nha Trang Bay, 124 mm SL (2, 4, 6, 8, 10, 11), details: 1, 2 — uppermost preopercular spine; 3, 4 — crests and/or tubercles of cranial roofing bone in postorbital portion of head; 5, 6 — posterior ending of premaxillary tooth band; 7, 8 — shape of tooth band on palatine; 9, 10 — predorsal scales; 11 — eighth scale of lateral line (stained by alizarine red S). Scale bars: 1, 2, 4, 7, 8 — 2.5 mm (7, 8 — common bar); 3 — 5 mm; 5, 9, 10 — 3 mm; 6 — 2 mm; 11 — 0.3 mm
FIGURE 15. Taeniopteris spatulata details. 1. LX1218 in Middle-Late Jurassic plant assemblages of the Catlins coast, New Zealand
FIGURE 15. Taeniopteris spatulata details. 1. LX1218, Curio Bay; 2. LX1097, Curio Bay; 3. LX1277, Curio Bay; 4. LX1241, Curio Bay. All scale bars equal 10 mm.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.