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181
datasets available to search
ShareScore release 0.9.0
Dataset results
181 results for “formalin”
Molecular classification of mature aggressive B cell lymphoma using digital multiplexed gene expression on formalin-fixed paraffin-embedded biopsy specimens
GEO Series GSE48184. Homo sapiens. 133 samples. Type: Expression profiling by array; Third-party reanalysis.
FFPEcap-seq: a method for sequencing capped RNAs in formalin-fixed paraffin-embedded samples
GEO Series GSE126346. Homo sapiens. 55 samples. Type: Expression profiling by high throughput sequencing.
Quantitative Gene Expression Profiling in Formalin-Fixed Paraffin-Embedded Samples by Affymetrix Microarrays
GEO Series GSE19249. Homo sapiens. 53 samples. Type: Expression profiling by array.
Optimizing RNA Extraction Methods for High Throughput Transcriptome Sequencing of Fresh Frozen and Formalin-Fixed Paraffin-Embedded Cardiac Tissues Specimens
GEO Series GSE267659. Macaca mulatta. 16 samples. Type: Expression profiling by high throughput sequencing.
Gene expression data from formalin-fixed paraffin-embedded (FFPE) human uveal melanoma tumors; subset early metastasis vs subset no metastasis
GEO Series GSE156877. Homo sapiens. 8 samples. Type: Expression profiling by array.
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches
GEO Series GSE130645. Homo sapiens. 121 samples. Type: Expression profiling by array; Expression profiling by high throughput sequencing.
Analysis of microarray data reliability and pathway networks using experimental formalin-fixed paraffin-embedded tissue
GEO Series GSE104634. Mus musculus. 16 samples. Type: Expression profiling by array.
Expression profiling of formalin-fixed, paraffin-embedded (FFPE) breast cancer metastases of the lymph node and autopsy tissues
GEO Series GSE32490. Homo sapiens. 168 samples. Type: Expression profiling by array.
Archival chromatin sequencing in formalin-fixed mouse specimens [FAIRE and Mnase]
GEO Series GSE261169. Mus musculus. 32 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Semi-Quantification of Her2/Neu Protein Expression in Formalin Fixed, Paraffin-Embedded Normal and Neoplastic Tissue
ClinicalTrials.gov study NCT02654444. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Effects of formalin-fixation on FAIRE-Seq and MNase-Seq signatures in yeast
GEO Series GSE256156. Saccharomyces cerevisiae. 58 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Systematic evaluation of RNA quality and microarray data reliability in formalin-fixed paraffin-embedded and fresh frozen tissue samples
GEO Series GSE104568. Homo sapiens; Rattus norvegicus. 15 samples. Type: Expression profiling by array.
Epigenomic analysis of Formalin-Fixed Paraffin-Embedded samples by CUT&Tag
GEO Series GSE235876. Homo sapiens; Mus musculus. 196 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Expression Profiling of Formalin-Fixed Parafin-Embedded Primary Breast Tumors
GEO Series GSE25234. Homo sapiens. 131 samples. Type: Expression profiling by array.
Validation of the MethylationEPIC BeadChip for fresh-frozen and formalin-fixed paraffin-embedded tumours (450K)
GEO Series GSE92577. Homo sapiens. 12 samples. Type: Methylation profiling by array.
Formalin Fixation at Low Temperature Better Preserves Nucleic Acid Integrity
GEO Series GSE27175. Homo sapiens. 30 samples. Type: Expression profiling by array.
Agreement in Breast Cancer Classification between Microarray and qRT-PCR from Fresh-Frozen and Formalin-Fixed Tissues
GEO Series GSE6130. Homo sapiens. 159 samples. Type: Expression profiling by array.
SnFFPE-Seq: towards scalable single nucleus RNA-seq of formalin-fixed paraffin-embedded (FFPE) tissues
GEO Series GSE211797. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A deep learning framework for the reconstruction of gene expression profiles derived from formalin-fixed paraffin-embedded samples
GEO Series GSE299799. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: Assessment of cross-platform concordance.
GEO Series GSE36147. Homo sapiens. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.