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11,174 results for “identifiers”
Peak flow identified at selected GRDC stations and the corresponding hydrological and hydrometeorological state variables
Data set contains a list of peak flows at selected GRDC stations as well as the start, peak, and end dates of each selected event. Hydrometeorlogical variables and hydrological state variables simulated by a hydrological model E-HYPE corresponding to each selected event are also listed in the dataset. Further description and content of each data file is available in the included metadata.
In silico identified signal peptides of Chlamydomonas reinhardtii
<p><strong>Overview</strong></p> <p><em>Chlamydomonas reinhardtii </em>theoretical signal peptides identified by<em> </em>SignalP 4.0 in a protein data set described below:</p> <ul> <li>Protein data set came from "The Genome Portal of the Department of Energy Joint Genome Institute" (http://genome.jgi.doe.gov/)</li> <li>Protein sequences were evaluated in SignalP 4.0 Server (http://www.cbs.dtu.dk/services/SignalP/)</li> </ul> <p> </p> <p><strong>File used</strong></p> <p>Chlre4_best_proteins.fasta.gz -> Protein dataset version used for analysis</p> <p> </p> <p><strong>Workflow</strong> </p> <p> ______Chlre4_best_proteins.fasta.gz_______</p> <p> | |</p> <p> Chlre4_best_proteins_fasta_protein_woSP.fasta Chlre4_best_proteins_signalPeptide.fasta</p> <p> |</p> <p> ___Chlre4_best_proteins_signalPeptide_unique.fasta___</p> <p> | |</p> <p> Chlre4_best_proteins_signalPeptide_unique.aln Signal Peptide Anotation from aligned.xlsx</p> <p> </p> <p><strong>Info</strong></p> <p>Chlre4_best_proteins_fasta_protein_woSP.fasta -> Mature protein sequences from proteins identified without signal peptide</p> <p>Chlre4_best_proteins_signalPeptide.fasta -> Identified signal peptide</p> <p>Chlre4_best_proteins_signalPeptide_unique.fasta -> Unique identified signal peptide</p> <p>Chlre4_best_proteins_signalPeptide_unique.aln -> Align signal peptides (UGENE)</p> <p>Signal Peptide Annotation from aligned.xlsx -> Signal peptide list, highlighted in orange theoretical tested.</p> <p> </p> <p><strong>Citations</strong></p> <p>For use of signal peptide dataset, please cite:</p> <p>Molino JVD, de Carvalho JCM, Mayfield SP (2018) Comparison of secretory signal peptides for heterologous protein expression in microalgae: Expanding the secretion portfolio for Chlamydomonas reinhardtii. PLoS ONE 13(2): e0192433. https://doi.org/10.1371/journal. pone.0192433</p> <p>and </p> <p><strong>SignalP 4.0: discriminating signal peptides from transmembrane regions</strong><br> Thomas Nordahl Petersen, Søren Brunak, Gunnar von Heijne & Henrik Nielsen<br> <em>Nature Methods</em>, <strong>8</strong>:785-786, <strong>2011</strong><br> <br> doi: 10.1038/nmeth.1701<br> PMID: 21959131<br> Supplementary materials: nmeth.1701-S1.pd</p> <p>and </p> <p><strong>The genome portal of the Department of Energy Joint Genome Institute: 2014 updates</strong></p> <p>H. Nordberg, M. Cantor, S. Dusheyko, S. Hua, A. Poliakov, I. Shabalov, T. Smirnova, I. V. Grigoriev, I. Dubchak, ,</p> <p>Nucleic Acids Res. 42, 26–31. <strong>2014</strong> </p> <p>doi:10.1093/nar/gkt1069.</p> <p> </p>
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Mogens Claudius Nielsen, <a href="http://www.wikidata.org/entity/Q124029767">http://www.wikidata.org/entity/Q124029767</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Cyril Franklin dos Passos, <a href="http://www.wikidata.org/entity/Q25525699">http://www.wikidata.org/entity/Q25525699</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Charles E. H. Aiken, <a href="http://www.wikidata.org/entity/Q95633709">http://www.wikidata.org/entity/Q95633709</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Edward Shearman Ross, <a href="http://www.wikidata.org/entity/Q5345292">http://www.wikidata.org/entity/Q5345292</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Roy Wilson Rings, <a href="http://www.wikidata.org/entity/Q104362803">http://www.wikidata.org/entity/Q104362803</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Florence Signaigo Wagner, <a href="http://www.wikidata.org/entity/Q19003091">http://www.wikidata.org/entity/Q19003091</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Joseph Pitty Couthouy, <a href="http://www.wikidata.org/entity/Q6286268">http://www.wikidata.org/entity/Q6286268</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Russell Jacob Seibert, <a href="http://www.wikidata.org/entity/Q6113772">http://www.wikidata.org/entity/Q6113772</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Donald W. Webb, <a href="http://www.wikidata.org/entity/Q22112968">http://www.wikidata.org/entity/Q22112968</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Edward Bruce Williamson, <a href="http://www.wikidata.org/entity/Q55074165">http://www.wikidata.org/entity/Q55074165</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Ferdinand Albin Pax, <a href="http://www.wikidata.org/entity/Q64244">http://www.wikidata.org/entity/Q64244</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Johannes Paulus Lotsy, <a href="http://www.wikidata.org/entity/Q2718138">http://www.wikidata.org/entity/Q2718138</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Dick Vockeroth, <a href="http://www.wikidata.org/entity/Q21339996">http://www.wikidata.org/entity/Q21339996</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Herbert Holdsworth Ross, <a href="http://www.wikidata.org/entity/Q22106426">http://www.wikidata.org/entity/Q22106426</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Jaspar Martin Otto von Oertzen, <a href="http://www.wikidata.org/entity/Q64946451">http://www.wikidata.org/entity/Q64946451</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Christen C. Raunkiær, <a href="http://www.wikidata.org/entity/Q444984">http://www.wikidata.org/entity/Q444984</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Carlos Manuel Leitão Baeta Neves, <a href="http://www.wikidata.org/entity/Q118779489">http://www.wikidata.org/entity/Q118779489</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
Natural history specimens collected and/or identified and deposited.
Natural history specimen data collected and/or identified by Enio B. Cano, <a href="http://www.wikidata.org/entity/Q42335752">http://www.wikidata.org/entity/Q42335752</a>. Claims or attributions were made on Bionomia, <a href="https://bionomia.net">https://bionomia.net</a> using specimen data from the Global Biodiversity Information Facility, <a href="https://gbif.org">https://gbif.org</a>.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.