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Figure 27 in Revision of the genus Bosmina Baird, 1845 (Cladocera: Bosminidae), based on evidence from male morphological characters and molecular phylogenies
Figure 27. Maximum likelihood (ML) phylogram based on partial 18S rDNA, internal transcribed spacer (ITS)-1, ITS-2, and partial 28S rDNA nuclear sequences for bosminids. The numbers above the branches indicate clade support estimated by the nonparametric bootstrapping using neighbour-joining and ML methods. The population abbreviations are given in Table 1 (lowercase letters indicate different specimens from the same site). The boxes indicate the subgenera (from top to bottom; see Fig. 25 for subgeneric colour scheme of boxes in the online version of this article) Bosmina, Sinobosmina, Liederobosmina, Lunobosmina, and Eubosmina.
Figure 23 in Revision of the genus Bosmina Baird, 1845 (Cladocera: Bosminidae), based on evidence from male morphological characters and molecular phylogenies
Figure 23. Bosmina (Eubosmina) tanakai sp. nov.: adult male from Ichiyanagi Numa Pond, Aomori Prefecture, Japan. A, general view; B, head, lateral view; C, D, head, anterior view; E, frontal head pore; F, region of lateral head pore; G, mucro, inner view; H, I, postabdomen, lateral view; J, distal end of postabdomen, ventral view; K, aesthetasc region of antenna I. Scale bars: 100 Mm.
Figure 4 in Revision of the genus Bosmina Baird, 1845 (Cladocera: Bosminidae), based on evidence from male morphological characters and molecular phylogenies
Figure 4. Bosmina (Bosmina) longirostris: from a duck pond near Ghent University, Belgium. A, postabdomen of juvenile female; B, juvenile male I, lateral view; C, D, postabdomen of juvenile male I; E, rostrum and antennae I of juvenile male I; F, limb I of juvenile male I, inner view; G, H, distal portion of limb I of juvenile male I; I, juvenile male II, lateral view; J–L, postabdomen of juvenile male II; M, rostrum and antennae I of juvenile male II; N, antenna II of juvenile male II; O, limb I of juvenile male II, inner view; P, distal portion of juvenile male II. See text for a list of morphological abbreviations. Scale bars: 100 Mm.
Figure 3 in Revision of the genus Bosmina Baird, 1845 (Cladocera: Bosminidae), based on evidence from male morphological characters and molecular phylogenies
Figure 3. Bosmina (Bosmina) longirostris: adult male from a duck pond near Ghent University, Belgium (A–D), and juvenile male II from Lake Glubokoe, Moscow Area, Russia (E–H). A, B, postabdomen; C, tip of postabdomen in distal view; D, distal portion of limb I; E, F, rostrum; G, lateral head pore and coxal portion of antenna II; H, postabdomen and copulatory hook on limb I. Scale bar: 10 Mm.
Figure 2 in Revision of the genus Bosmina Baird, 1845 (Cladocera: Bosminidae), based on evidence from male morphological characters and molecular phylogenies
Figure 2. Bosmina (Bosmina) longirostris: adult male from a duck pond near Ghent University, Belgium. A, lateral view; B, anterior view; C, head; D, lateral head pore; E, F, rostrum; G, antenna II; H, mucro. Scale bars: 100 Mm for (A, B); 10 Mm for (C–H).
Figure 1 in Revision of the genus Bosmina Baird, 1845 (Cladocera: Bosminidae), based on evidence from male morphological characters and molecular phylogenies
Figure 1. Bosmina (Bosmina) longirostris: adult male from a duck pond near Ghent University, Belgium. A, B, general view; C, lateral head pore; E, F, postandomen; G, antennae I, anterior view; H, antenna II, posterior view; I, distal portion of antenna II, anterior view; J, limb I, inner view; K–M, distal portion of limb I; N, subdistal lobe. See text for a list of morphological abbreviations. Scale bars: 100 Mm.
Figure 6 in The taxonomic status of some Atlanto-Mediterranean species in the subgenus Holothuria (Echinodermata: Holothuroidea: Holothuriidae) based on molecular evidence
Figure 6. Tentacle rods of six specimens from Holothuria mammata – clade 1 (A, B) and Holothuria tubulosa – clade 2 (C, D, E, F). Scale bars = 100 Mm (A–F). The number on the upper left-hand side of each image represents the individual number in accordance with Table 1.
Figure 5 in The taxonomic status of some Atlanto-Mediterranean species in the subgenus Holothuria (Echinodermata: Holothuroidea: Holothuriidae) based on molecular evidence
Figure 5. Main variables selected by the stepwise discriminant function analysis to distinguish clade 1 – Holothuria mammata (upper box, dark grey colour), clade 2 – Holothuria tubulosa (middle box, clear grey colour), and clade 3 – Holothuria dakarensis (bottom box, white colour). A–F, variables that characterize function 1. G–H, variables that characterize function 2. The centre lines of the boxes mark the median value, the hinges the lower and upper quartiles, respectively, and the whiskers the range of data between values smaller/greater than the lower/upper quartile minus/plus 1.5 times the interquartile range; asterisks represent outliers (data values outside of this range); and squares represent unusually small or large values outside of the outer fences.
Figure 1 in The taxonomic status of some Atlanto-Mediterranean species in the subgenus Holothuria (Echinodermata: Holothuroidea: Holothuriidae) based on molecular evidence
Figure 1. Collection localities: Mediterranean Sea: T, Tunisia; P, Cabo de Palos; U, Aguilas. Atlantic Ocean: C, Canary Islands; A, Algarve; Z, Azores Islands; V, Cape Verde Islands, G, Gulf of Mexico.
Figure 2. A in The taxonomic status of some Atlanto-Mediterranean species in the subgenus Holothuria (Echinodermata: Holothuroidea: Holothuriidae) based on molecular evidence
Figure 2. A, maximum parsimony (MP) tree obtained from 16S mtDNA sequences (215 steps; consistency index = 0.856, retention index = 0.896, homoplasy index = 0.144), numbers on branches represent per cent bootstrap support values of 1000 replicates from MP/neighbour-joining analyses. B, optimal maximum likelihood tree obtained from 16S mtDNA sequences (–ln likelihood = 1493.80208), numbers on branches represent per cent bootstrap support values of 500 replicates. In both figure parts, labels of operational taxonomic units indicate the preliminary species identified (m, Holothuria mammata; t, Holothuria tubulosa; st, Holothuria stellati; d, Holothuria dakarensis) and the locality. After these, the clade (1–3) and the name of the species are provided.
Figure 1 in Evolutionary systematics of the Indian mouse Mus famulus Bonhote, 1898: molecular (DNA/DNA hybridization and 12S rRNA sequences) and morphological evidence
Figure 1. Phylogenetic trees derived from the DNA/DNA hybridization analysis. A and B: Consensus trees resulting from the bootstrap analysis of delta-Tm (A) and delta-mode (B) 12*12 matrices. BP values are indicated when different from 100%. The lengths of the branches correspond to one tree arbitrarily selected among those of the consensus. C and D: Average consensus trees resulting from the weighted jacknife procedure for delta-Tm (C) and delta-mode (D) 13*13 matrices. The thin lines represent nodes that were not present in maximum and minimum consensus trees or that are not supported for all combinations of single deletion analysis. uUnlabelled taxa. The names in bold indicate the differences that can be observed between the two distance estimators (Tm, Mode).
Figure 4 in Evolutionary systematics of the Indian mouse Mus famulus Bonhote, 1898: molecular (DNA/DNA hybridization and 12S rRNA sequences) and morphological evidence
Figure 4. Fifty per cent majority rule consensus of 52 trees derived from the morphological analysis. Each mostparsimonious tree is 54 steps long, and has a Consistency Index of 0.52, a Retention Index of 0.72, and a Rescaled Consistency Index of 0.37. Values given below the branches represent the percentage of trees containing the specified clades.
Figure 3. Synthetic tree derived from the 12S in Evolutionary systematics of the Indian mouse Mus famulus Bonhote, 1898: molecular (DNA/DNA hybridization and 12S rRNA sequences) and morphological evidence
Figure 3. Synthetic tree derived from the 12S rRNA datasets with the inclusion of all substitutions (TV + TI). The thin lines indicate nodes that are not robustly supported by all kinds of analysis. The robustness of the different nodes are indicated as follows: [BP(BPweighted analysis)/BSI (Parsimony)]/[BP(NJ)/Reliability Percentage (ML)].
Data from: Molecular and morphological evidence reveals a new species of Antiphytum (Echiochiloideae, Boraginaceae) from Guerrero, Mexico
<p>Molecular and morphological evidence supports a new species in the genus <i>Antiphytum</i> from the Sierra Madre del Sur, in the state of Guerrero, Mexico, here described as <b><i>A. brevicalyx</i></b>. This species is unique in the genus by possessing a calyx shorter than the corolla tube at anthesis; it is similar to <i>A. floribundum</i> in inflorescence arrangement, but differs from that species in lacking a basal leaf rosette and having appendages on the corolla throat. According to phylogenetic analysis of nuclear ITS and plastid <i>ndhF-rpl32 </i>sequences representing seven of the eight North American species of the genus besides the proposed new species, accessions of <i>A. brevicalyx<b> </b></i>form a well-defined clade within <i>Antiphytum</i>, corroborating its distinctive morphology. However, the analyses do not resolve the phylogenetic position of <i>A. brevicalyx </i>within the genus.</p>
Figure 19 in The resurrection of Cerasommatidiidae, an enigmatic group of coccinelloid beetles (Coleoptera: Coccinelloidea) based on molecular and morphological evidence
Figure 19. Habitats where type specimens of Cerasommatidiidae spp. were collected. A, track near the point where Yamuy constratus sp. nov. female paratype was collected. B, flight intercept trap in El Yunque National Forest where Y. constratus sp. nov. female paratype was collected. C, road-side habitat near Ifotaka, the type locality of MahaƲelo madagasus sp. nov. D, campsite at Forêt de Mahavelo, near the point where M. madagasus sp. nov. type series was collected.
Figure 20 in The resurrection of Cerasommatidiidae, an enigmatic group of coccinelloid beetles (Coleoptera: Coccinelloidea) based on molecular and morphological evidence
Figure 20. Geographical distribution of Cerasommatidiidae spp. A, distribution of species in eastern Caribbean region. B, distribution of species in southeastern Brazil. C, distribution of species in Madagascar.
Figure 18 in The resurrection of Cerasommatidiidae, an enigmatic group of coccinelloid beetles (Coleoptera: Coccinelloidea) based on molecular and morphological evidence
Figure 18. Morphology of MahaƲelo madagasus sp. nov. A, antenna. B, head, dorso-frontal (arrow: antennal grooves). C, left half of pronotum (arrow: indentation on postero-lateral corner of pronotum). D, prosternum (arrow: median carina). E, pterothorax and first abdominal ventrite (white arrow: epipleural groove; black arrows: meso- and metatrochanters). F, left elytron, dorsal. G, left half of abdomen, ventral (arrow: anterior bordering carina).
Figure 16 in The resurrection of Cerasommatidiidae, an enigmatic group of coccinelloid beetles (Coleoptera: Coccinelloidea) based on molecular and morphological evidence
Figure 16. Morphology of Yamuy marginatus sp. nov. A, head, dorsal. B, pronotum. C, prosternum (arrow: narrowed prosternal process). D, meso- and metaventrite (arrow: short postcoxal longitudinal carinae). E, protarsus, ventral. F, abdomen, ventral (arrow: short postcoxal longitudinal carinae).
Figure 14 in The resurrection of Cerasommatidiidae, an enigmatic group of coccinelloid beetles (Coleoptera: Coccinelloidea) based on molecular and morphological evidence
Figure 14. Terminalia of Yamuy gen. nov. A–C, Yamuy constratus sp. nov.: A, abdominal segment VIII and male genital segment, ventral. B, aedeagus, ventral. C, female genitalia. D–F, Yamuy marginatus sp. nov.: D, male genital segment, ventral. E, aedeagus, ventral. F, female genitalia.
Figure 7 in The resurrection of Cerasommatidiidae, an enigmatic group of coccinelloid beetles (Coleoptera: Coccinelloidea) based on molecular and morphological evidence
Figure 7. Morphology of Karumbe gen. nov. A–E, G, J–K, M, Karumbe pakaluki sp. nov. F, I, L, Karumbe geiseri sp. nov. H, Karumbe brethesi sp. nov. A, head without mouthparts, ventral. B, labrum, dorsal. C, maxilla, ventral. D, labium, ventral. E, mandible, ventral. F, prothorax, ventral, G, metanotum. H, hindwing. I, meso- and metaventrite. J, details of metaventrite showing metendosternite. K, hindleg, ventral. L, metatarsus. M, abdomen, ventral.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.