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155 results for “multilocus phylogeny”
Appendix II in Morphology and multilocus phylogeny of the Spiny-footed Lizard (Acanthodactylus erythrurus) complex reveal two new mountain species from the Moroccan Atlas
Appendix II. Morphological variation within the type series of Acanthodactylus lacrymae sp. nov.. HT: holotype, PT: paratype. Ad.: adult, Subad.: subadult, Juv.: juvenile. F female, M: male. Cf. Material and methods for the other abbreviations used.
FIG. 12 in Multilocus phylogeny of Gryllus field crickets (Orthoptera: Gryllidae: Gryllinae) utilizing anchored hybrid enrichment
FIG. 12. Our current hypothesis of species relationships among the named Gryllus species as well as the candidate lineages (denoted with an *) of putative species based on the RAxML analysis of concatenated data. Color coding indicates levels of bootstrap support from 50% (red) – 100% (bright green); branches with <50% bootstrap support collapsed.
FIG. 10 in Multilocus phylogeny of Gryllus field crickets (Orthoptera: Gryllidae: Gryllinae) utilizing anchored hybrid enrichment
FIG. 10. Phylogeny of Gryllus panel 4 of 4. RAxML tree (left) with taxon names; Astral tree (right) with thin lines connecting tips to taxon names. Support value color codes:> 90% = bright green;> 80% and <90% = green;> 70% and <80% = olive;> 60% and <70% = orange/brown;> 50% and <60% = red; <50% = black
FIG. 8 in Multilocus phylogeny of Gryllus field crickets (Orthoptera: Gryllidae: Gryllinae) utilizing anchored hybrid enrichment
FIG. 8. Phylogeny of Gryllus panel 2 of 4. RAxML tree (left) with taxon names; Astral tree (right) with thin lines connecting tips to taxon names. Support value color codes:> 90% = bright green;> 80% and <90% = green;> 70% and <80% = olive;> 60% and <70% = orange/brown;> 50% and <60% = red; <50% = black.
FIG. 5 in Multilocus phylogeny of Gryllus field crickets (Orthoptera: Gryllidae: Gryllinae) utilizing anchored hybrid enrichment
FIG. 5. Overview of in-group taxa relationships based on RAxML concatenated analysis, with bootstrap support values. The named Groups correspond to Weissman & Gray (2019).
FIG. 9 in Multilocus phylogeny of Gryllus field crickets (Orthoptera: Gryllidae: Gryllinae) utilizing anchored hybrid enrichment
FIG. 9. Phylogeny of Gryllus panel 3 of 4. RAxML tree (left) with taxon names; Astral tree (right) with thin lines connecting tips to taxon names. Support value color codes:> 90% = bright green;> 80% and <90% = green;> 70% and <80% = olive;> 60% and <70% = orange/brown;> 50% and <60% = red; <50% = black.
Figure 4. Gonopods 1 and 2 in A new multilocus phylogeny reveals overlooked diversity in African freshwater crabs (Brachyura: Potamoidea): a major revision with new higher taxa and genera
Figure 4. Gonopods 1 and 2 of the four genera in Erimetopini. A–C, Erimetopus vandenbrandeni; D–F, Longipotamonautes ballayi; G–I, Nesonautes margaritarius; J–L, Occidensonautes ecorssei. Scale bar: A–L = 2.0 mm.
Figure 3. Gonopods 1 and 2 in A new multilocus phylogeny reveals overlooked diversity in African freshwater crabs (Brachyura: Potamoidea): a major revision with new higher taxa and genera
Figure 3. Gonopods 1 and 2 of four genera in Liberonautinae. A–C, Buea asylos (Cumberlidge et al., 2019: fig. 7a, d; 8a); D–F, Potamonemus mambilorum (Cumberlidge et al., 2019: fig. 7b, e; 8b); G–I, Sudanonautes floweri; J–L, Louisea balssi (Mvogo Ndongo et al., 2018: fig. 5a–c, © Magnolia Press, reproduced with permission from the copyright holder). A, D, G, J, left G1 ventral view; B, E, H, K, left G1 dorsal view; C, F, I, L, left G2 ventral view. Scale bar: A, B, D, E, G, H, J, K = 2.0 mm, C, F, I, L = 1.8 mm.
Figure 2. Liberonautinae. Gonopods 1 and 2 in A new multilocus phylogeny reveals overlooked diversity in African freshwater crabs (Brachyura: Potamoidea): a major revision with new higher taxa and genera
Figure 2. Liberonautinae. Gonopods 1 and 2 of Liberonautes latidactylus, NMU9.V.2005B (CW 72, CL 47.2, CH 20.5, FW 19.3 mm) Guinea, West Africa. A, left G1 ventral view; (B) left G1 dorsal view; (C) left G2 ventral view. Scale bar: A, B = 2.8 mm, C = 1.8 mm.
Fig. 1 in Multilocus Phylogeny Support the Nonbioluminescent Firefly Chespirito as a New Subfamily in the Lampyridae (Coleoptera: Elateroidea)
Fig. 1. Dorsal habitus of Chespirito species. (A) C. ballantyneae. (B) C. lloydi. (C) C. zaragozai. Scale bars: 1 mm.
Figure 6 in Multilocus phylogeny and morphological analyses illuminate overlooked diversity of Soriculus (Mammalia: Eulipotyphla: Soricidae), with descriptions of two new endemic species from the eastern Himalayas
Figure 6. Dorsal, ventral, and lateral views of the skull and lateral view of the mandible of (A) S. nigrescens (MT201904155), (B) S. nivatus (holotype, MT1904951), (C) S. medogensis (holotype, MT201811181), and (D) S. minor (TC-H-KIZ 2345).
Figure 6 in Molecular phylogeny of hinge-beak shrimps (Decapoda: Caridea: Rhynchocinetes and Cinetorhynchus) and allies: a formal test of familiar and generic monophyly using a multilocus phylogeny
Figure 6. Two-phase (above) and three-phase (below) phylogenetic analyses of maximum likelihood (ML) and Bayesian inference (BI) for representatives of the family Rhynchocinetidae using three genes. The software MAFFT was used for sequence alignment The two phylogenetic trees resulted from the combined analysis of 12S, Histone (H3), and Enolase gene fragments of Rhynchocinetes (seven taxa and eight terminals), Cinetorhynchus (five taxa and 12 terminals), Lipkius (one taxon and two terminals), Eugonatonotus (one taxon) and outgroups. The general topology of the trees obtained from two-phase and three-phase ML and BI analyses was the same. The numbers above or below the branches represent the posterior probabilities from the BI analysis in MrBayes and bootstrap values obtained from ML analyses in TREEFINDER (ML/BI).
Figure 5 in Multilocus phylogeny and historical biogeography of the Crematogaster inflata-group (Hymenoptera: Formicidae) in South-East Asia
Figure 5. Evolution of antennal club (A), propodeal inflation (B), propodeal spines (C) and metapleural gland opening (D) in the Crematogaster inflata-group. Ancestral state reconstructions as estimated with corHMM under the ER model. Pie charts represent ancestral reconstructions of number of antennal club, inflation of propodeum, propodeal spines and metapleural gland opening.
Figure 2 in Multilocus phylogeny and historical biogeography of the Crematogaster inflata-group (Hymenoptera: Formicidae) in South-East Asia
Figure 2. Maximum likelihood (ML) phylogeny for 38 taxa using six nuclear (ArgK, CAD, EF1αF1, LWRh, Top1, Wg) and two mitochondrial (12S, COI) genes in an IQ-TREE analysis. Values at each node are bootstrap value of the IQ-TREE analysis and posterior probability of the MRBAYES analysis, respectively; '–' indicates that this node is not found in the MRBAYES topology. Data were partitioned by PARTITIONFINDER and analysed using a best fit model for each gene and codon position. Inset, Crematogaster inflata specimen in profile view.
Figure 3 in Multilocus phylogeny and historical biogeography of the Crematogaster inflata-group (Hymenoptera: Formicidae) in South-East Asia
Figure 3. Phylogenetic relationships and species groups within the Crematogaster inflata-group from maximum likelihood (ML) and Bayesian (BI) analyses. Bootstrap value and posterior probability are shown at each node.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
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