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opencc-by-4.0Oct 2019View details →

IMRPhenomPv2_NRTidal_GW190425_narrow_Mc

sdgsdg

opencc-zeroDec 2019View details →

A narrow ear canal reduces sound velocity to 1 create additional acoustic inputs in a micro-scale insect ear

Located in the forelegs, katydid ears are unique among arthropods in having outer, middle and inner component, analogous to the mammalian ear. Unlike mammals, sound is received externally, and internally via a narrow ear canal (EC) derived from the respiratory tracheal system. Inside the EC sound travels slower than in free air, causing temporal and pressure differences between external and internal inputs. The delay is suspected to arise as sound propagation changes from adiabatic to isothermal, imposed by EC geometry. If true, a reduction in sound velocity should persist independently of the gas composition in the EC. Integrating experimental (laser Doppler vibrometry, micro-CT) and numerical methods, we demonstrate that the narrow radius of the EC is the major cause of the signal time delay. Results imply that the EC is asymmetrically bifurcated, creating four notable auditory paths for each ear. Implication of methods and findings in avian hearing are discussed.

opencc-zeroAug 2020View details →

Secondary contact zones of closely-related Erebia butterflies overlap with narrow phenotypic and parasitic clines

Zones of secondary contact between closely related taxa are a common legacy of the Quaternary ice ages. Despite their abundance, the factors that keep species apart and prevent hybridisation are often unknown. Here we study a very narrow contact zone between three closely related butterfly species of the Erebia tyndarus species complex. Using genomic data, we first determined if gene flow occurs and then assessed whether it might be hampered by differences in chromosome number between some species. We found interspecific gene flow between sibling species that differ in karyotype by one chromosome. Conversely, only F1 hybrids occurred between two species that have the same karyotype, forming a steep genomic cline. In a second step, we fitted clines to phenotypic, ecological and parasitic data to identify the factors associated with the genetic cline. We found clines for phenotypic data and the prevalence of the endosymbiont parasite Wolbachia to overlap with the genetic cline, suggesting that they might be drivers for separating the two species. Overall our results highlight that some gene flow is possible between closely-related species despite different chromosome numbers, but that other barriers restrict such gene flow.

opencc-zeroNov 2020View details →

Rare tree species have narrow environmental but not functional niches

1. The majority of species in many communities are rare, and it is an enduring challenge to understand the mechanism of species rarity and commonness in local communities. The niche partitioning hypotheses posit that common species occupy wide and core positions, while rare species occupy narrow and outlying niche positions. We test these hypotheses here, simultaneously considering both an environmental and a functional perspective on niches. 2. We examined how niches correlate with species abundance in environmental and functional space by quantifying relationships between species abundance and niche width and niche position. Environmental niches were defined as the section of an environmental gradient where each species occurred, and functional niches using species traits thought to be related to resource acquisition. Hypotheses were tested using a dataset including functional traits collected from 4302 individual trees of 423 species and environmental data in one subtropical and one tropical forest in China. 3. Consistent with the niche partitioning hypotheses, rare species in our two study systems tended to occupy the edges of the functional and environmental niche space. This likely allows rare species to avoid competition from dominant species. On the other hand, rare species tended to have a similar or larger niche width than common species in functional space, which contrasts with their narrower niche width in environmental space. 4. Synthesis. Our results support the prediction that rare species occupy outlying niches to avoid competition with common species. We found inconsistent evidence, though, about the niche width of rare species. Rare species may be less constrained in functional space, and persist by dint of their functional lability and ability to use a variety of resources. Our work supports previously hypothesized mechanisms underlying local species abundance patterns, but highlights new idiosyncrasies when considering environmental niche or functional space alone.

opencc-by-4.0Nov 2020View details →

Wang et al Narrow-leafed lupin selective sweep analysis results

Narrow-leafed lupin selective sweep analysis results, supplementary datasets.

opennotspecifiedDec 2020View details →

FIGURE 1 in Narrow-winged pyralids (Lepidoptera, Pyraloidea, Pyralidae, Phycitinae) of Leningrad Province and the city of St. Petersburg, Russia

FIGURE 1. Habitat of Ephestia mistralella, Episcythrastis tabidella and Homoeosoma nimbella, dry sandy meadow in environs of Luga (Luga polygon), 24 July 2015.

opencc-zeroDec 2013View details →

Data from: Strong natural selection on juveniles maintains a narrow adult hybrid zone in a broadcast spawner

Natural selection can maintain and help form species across different habitats, even when dispersal is high. Selection against inferior migrants (immigrant inviability) acts when locally adapted populations suffer high mortality on dispersal to unsuitable habitats. Habitat-specific populations undergoing divergent selection via immigrant inviability should thus show (1) a change in the ratio of adapted to nonadapted individuals among age/size classes and (2) a cline (defined by the environmental gradient) as selection counterbalances migration. Here we examine the frequencies of two depth-segregated lineages in juveniles and adults of a Caribbean octocoral, Eunicea flexuosa. Distributions of the two lineages in both shallow and deep environments were more distinct when inferred from adults than juveniles. Despite broad larval dispersal, we also found an extremely narrow hybrid zone (<100 m), with coincident clines for molecular and morphological characters of the host coral and its algal symbiont. Effective dispersal estimates derived from the hybrid zone are remarkably small (<20 m) for a broadcast spawner. The large selection coefficient against mismatched genotypes derived from cohort data is consistent with that from field transplant experiments. Narrow hybrid zones and limited effective dispersal may be a common outcome of long periods of postsettlement, prereproductive selection across steep ecological gradients. Strong diversifying selection provides a mechanism to explain the prevalence of depth-segregated sibling species in the sea.

opencc-zeroDec 2016View details →

Data from: Unequal contribution of widespread and narrow-ranged species to botanical diversity patterns

In conservation studies, solely widespread species are often used as indicators of diversity patterns, but narrow-ranged species can show different patterns. Here, we assess how well subsets of narrow-ranged, widespread or randomly selected plant species represent patterns of species richness and weighted endemism in Gabon, tropical Africa. Specifically, we assess the effect of using different definitions of widespread and narrow-ranged and of the information content of the subsets. Finally, we test if narrow-ranged species are overrepresented in species-rich areas. Based on distribution models of Gabonese plant species, we defined sequential subsets from narrow-ranged-to-widespread, widespread-to-narrow-ranged, and 100 randomly arranged species sequences using the range sizes of species in tropical Africa and within Gabon. Along these sequences, correlations between subsets and the total species richness and total weighted endemism patterns were computed. Random species subsets best represent the total species richness pattern, whereas subsets of narrow-ranged species best represent the total weighted endemism pattern. For species ordered according to their range sizes in tropical Africa, subsets of narrow-ranged species represented the total species richness pattern better than widespread species subsets did. However, the opposite was true when range sizes were truncated by the Gabonese national country borders. Correcting for the information content of the subset results in a skew of the sequential correlations, its direction depending on the range-size frequency distribution. Finally, we find a strong, positive, non-linear relation between weighted endemism and total species richness. Observed differences in the contribution of narrow-ranged, widespread and randomly selected species to species richness and weighted endemism patterns can be explained by the range-size frequency distribution and the use of different definitions of widespread or narrow-ranged. We call for a reconsideration of the use of widespread species as an indicator of diversity patterns, and advocate using the full ranges of species when assessing diversity patterns.

opencc-zeroDec 2014View details →

Data from: Taking the discovery approach in integrative taxonomy: decrypting a complex of narrow-endemic Alpine harvestmen (Opiliones: Phalangiidae: Megabunus)

Species delimitation is fundamental for biological studies, yet precise delimitation is not an easy task, and every involved approach has an inherent failure rate. Integrative taxonomy, a method that merges multiple lines of evidence, can profoundly contribute to reliable alpha taxonomy and shed light on the processes behind speciation. In this study, we explored and validated species limits in a group of closely related Megabunus harvestmen (Eupnoi, Phalangiidae) endemic to the European Alps. Without a priori species hypotheses, we used multiple sources of inference, including mitochondrial and multilocus nuclear DNA, morphometrics, and chemistry. The results of these discovery approaches revealed morphological crypsis and multiple new species within two of the five hitherto known species. Based on our analyses, we discussed the most plausible evolutionary scenarios, invoked the most reasonable species hypotheses, and validated the new species limits. Building upon the achieved rigour, three new species, M. cryptobergomas Muster & Wachter sp. nov., M. coelodonta Muster & Steiner sp. nov., and M. lentipes Muster & Komposch sp. nov., are formally described. In addition, we provide a dichotomous morphological key to the Megabunus species of the Alps. Our work demonstrates the suitability of integrative, discovery-based approaches in combination with validation approaches to precisely characterise species and enabled us to implement nomenclatural consequences for this genus.

opencc-zeroDec 2016View details →

Data from: Closing the gap: avian lineage splits at a young, narrow seaway imply a protracted history of mixed population response

The evolutionary significance of spatial habitat gaps has been well recognized since Alfred Russel Wallace compared the faunas of Bali and Lombok. Gaps between islands influence population structuring of some species, and flightless birds are expected to show strong partitioning even where habitat gaps are narrow. We examined the population structure of the most numerous living flightless land bird in New Zealand, Weka (Gallirallus australis). We surveyed Weka and their feather lice in native and introduced populations using genetic data gathered from DNA sequences of mitochondrial genes and nuclear β-fibrinogen and five microsatellite loci. We found low genetic diversity among extant Weka population samples. Two genetic clusters were evident in the mtDNA from Weka and their lice, but partitioning at nuclear loci was less abrupt. Many formerly recognized subspecies/species were not supported; instead, we infer one subspecies for each of the two main New Zealand islands. Although currently range restricted, North Island Weka have higher mtDNA diversity than the more wide-ranging southern Weka. Mismatch and neutrality statistics indicate North Island Weka experienced rapid and recent population reduction, while South Island Weka display the signature of recent expansion. Similar haplotype data from a widespread flying relative of Weka and other New Zealand birds revealed instances of North Island—South Island partitioning associated with a narrow habitat gap (Cook Strait). However, contrasting patterns indicate priority effects and other ecological factors have a strong influence on spatial exchange at this scale.

opencc-zeroDec 2014View details →

Data from: Ecological differentiation, lack of hybrids involving diploids, and asymmetric gene flow between polyploids in narrow contact zones of Senecio carniolicus (syn. Jacobaea carniolica, Asteraceae)

Areas of immediate contact of different cytotypes offer a unique opportunity to study evolutionary dynamics within heteroploid species and to assess isolation mechanisms governing coexistence of cytotypes of different ploidy. The degree of reproductive isolation of cytotypes, i.e., the frequency of heteroploid crosses and subsequent formation of viable and (partly) fertile hybrids, plays a crucial role for the long-term integrity of lineages in contact zones. Here, we assessed fine-scale distribution, spatial clustering and ecological niches as well as patterns of gene-flow in parental and hybrid cytotypes in zones of immediate contact of di-, tetra- and hexaploid Senecio carniolicus (Asteraceae) in the Eastern Alps. Cytotypes were spatially separated also at the investigated micro-scale; the strongest spatial separation was observed for the fully interfertile tetra- and hexaploids. The three main cytotypes showed highly significant niche differences, which were, however, weaker than across their entire distribution ranges in the Eastern Alps. Individuals with intermediate ploidy levels were found neither in the diploid/tetraploid nor in the diploid/hexaploid contact zones indicating strong reproductive barriers. In contrast, pentaploid individuals were frequent in the tetraploid/hexaploid contact zone, albeit limited to a narrow strip in the immediate contact zone of their parental cytotypes. AFLP fingerprinting data revealed introgressive gene flow mediated by pentaploid hybrids from tetra- to hexaploid individuals, but not vice versa. The ecological niche of pentaploids differed significantly from that of tetraploids but not from hexaploids.

opencc-zeroDec 2012View details →

Data from: Phylogeography of Primula allionii (Primulaceae), a narrow endemic of the Maritime Alps

Primula allionii is endemic to a tiny area of the Maritime Alps and has one of the narrowest distribution ranges in this hotspot of biodiversity. Phylogeographical patterns in P. allionii were studied using plastid DNA markers and dominantly inherited markers (AFLP and ISSR) to verify any admixture between P. allionii and the sympatric P. marginata and to detect the phylogeographical history of the species. Morphometric measurements of flowers and admixture analysis support the hypothesis that hybridization occurs in nature. Species distribution models using two climate models (CCSM and MIROC) suggested a reduction in habitat suitability during cold periods. Phylogeographical analysis suggested an old allopatric divergence during the mid-Pleistocene transition (about 0.8 Mya) without recolonization/contraction cycles. The Alps watershed does not act as a strong barrier between the two main areas of the distribution range, and moderate gene flow by pollen seems to create the admixture recorded among the stands. According to our results, the persistence of P. allionii throughout the Ice Age appears to be linked to the capacity of the Maritime Alps to provide a wide diversity of microhabitats consistent with the recent biogeographical pattern proposed for the Mediterranean Basin.

opencc-zeroDec 2010View details →

Data from: Strong selection against hybrids maintains a narrow contact zone between morphologically cryptic lineages in a rainforest lizard

Phenotypically cryptic lineages comprise an important yet understudied part of biodiversity; in particular, we have much to learn about how these lineages are formed and maintained. To better understand the evolutionary significance of such lineages, we studied a hybrid zone between two morphologically-cryptic phylogeographic lineages in the rainforest lizard, Lampropholis coggeri. Analyzing a multilocus genetic dataset through cline inference, individual-based methods and population measures of disequilibrium and using simulations to explore our genetic results in context of theoretical expectations, we inferred the processes maintaining this hybrid zone. We find that these lineages meet in a hybrid zone that is narrow (~400 m) relative to inferred dispersal rate. Further, the hybrid zone exhibits substantial genetic disequilibrium and sharply coincident and largely concordant clines. Based on our knowledge about the region's biogeography, the species' natural history, and our simulation results, we suggest that strong selection against hybrids structures this system. As all clines show a relatively narrow range of introgression, we posit that this hybrid zone might not yet be in equilibrium. Nonetheless, our results clearly show that phylogeographic lineages can evolve substantial reproductive isolation without concomitant morphological diversification, suggesting that such lineages can constitute a significant component of evolutionary diversity.

opencc-zeroDec 2013View details →

Data from: Adaptive genetic divergence along narrow environmental gradients in four stream insects

A central question linking ecology with evolutionary biology is how environmental heterogeneity can drive adaptive genetic divergence among populations. We examined adaptive divergence of four stream insects from six adjacent catchments in Japan by combining field measures of habitat and resource components with genome scans of non-neutral Amplified Fragment Length Polymorphism (AFLP) loci. Neutral genetic variation was used to measure gene flow and non-neutral genetic variation was used to test for adaptive divergence. We identified the environmental characteristics contributing to divergence by comparing genetic distances at non-neutral loci between sites with Euclidean distances for each of 15 environmental variables. Comparisons were made using partial Mantel tests to control for geographic distance. In all four species, we found strong evidence for non-neutral divergence along environmental gradients at between 6 and 21 loci per species. The relative contribution of these environmental variables to each species' ecological niche was quantified as the specialization index, S, based on ecological data. In each species, the variable most significantly correlated with genetic distance at non-neutral loci was the same variable along which each species was most narrowly distributed (i.e., highest S). These were gradients of elevation (two species), chlorophyll-a, and ammonia-nitrogen. This adaptive divergence occurred in the face of ongoing gene flow (Fst = 0.01–0.04), indicating that selection was strong enough to overcome homogenization at the landscape scale. Our results suggest that adaptive divergence is pronounced, occurs along different environmental gradients for different species, and may consistently occur along the narrowest components of species' niche.

FIGURE 5 in Nematodes from galls on Myrtaceae. X. Fergusobia from galls on narrow-leaved Melaleuca spp. in Australia, with descriptions of three new species

FIGURE 5. Dried galls of Fergusobia spp. collected from narrow-leaved Melaleuca spp.: A, from M. armillaris; B, from M. decora; C, from M. linariifolia; D, from M. nodosa. Scale bars = 2 mm.

FIGURE 2. Fergusobia decorae n in Nematodes from galls on Myrtaceae. X. Fergusobia from galls on narrow-leaved Melaleuca spp. in Australia, with descriptions of three new species

FIGURE 2. Fergusobia decorae n. sp. (all in lateral view): A, Entire parthenogenetic female; B, Head of parthenogenetic female; C, Habitus; D, Tails of parthenogenetic females; E, Entire infective female; F, Head of infective female; G; Habitus; H, Tails of infective females; I, Entire male; J, Head of male; K, Habitus; L, Tails of males. Scale bars: A, E, I = 50 Μm. B, F, J = 5 Μm. Tails not drawn to scale.

FIGURE 6 in Nematodes from galls on Myrtaceae. X. Fergusobia from galls on narrow-leaved Melaleuca spp. in Australia, with descriptions of three new species

FIGURE 6. Dorsal shields of Fergusonina spp. collected from narrow-leaved Melaleuca spp. (automontage images): A, larva from M. decora; B, larva from M. linariifolia; C, pupa from M. nodosa. Scale bars = 0.5 mm.

FIGURE 1. Fergusobia armillarisae n in Nematodes from galls on Myrtaceae. X. Fergusobia from galls on narrow-leaved Melaleuca spp. in Australia, with descriptions of three new species

FIGURE 1. Fergusobia armillarisae n. sp. (all in lateral view): A, Entire parthenogenetic female; B, Head of parthenogenetic female; C, Habitus; D, Tails of parthenogenetic females; E, Entire infective female; F, Head of infective female; G; Habitus; H, Tails of infective females; I, Entire male; J, Head of male; K, Habitus; L, Tails of males; M, lateral lines. Scale bars: A, E, I = 50 Μm. B, F, J, M = 5 Μm. Tails not drawn to scale.